 |
|
EBI DbfetchID AJ239043; SV 1; linear; genomic DNA; STD; PRO; 4371 BP. XX AC AJ239043; XX DT 10-MAY-2000 (Rel. 63, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Buchnera aphidicola partial yhbz; rpsI; rplM; aroQ/pheA; ffh and partial DE rpsP genes XX KW 30S ribosomal protein S16; 30S ribosomal protein S9; KW 50S ribosomal protein L13; aroQ gene; chorismate mutase; ffh gene; KW pheA gene; prephenate dehydratase; rplM gene; rpsI gene; rpsP gene; KW signal recognition particle 54Kd; yhbz gene. XX OS Buchnera aphidicola OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Buchnera. XX RN [1] RP 1-4371 RA Silva F.J.; RT ; RL Submitted (11-MAY-1999) to the EMBL/GenBank/DDBJ databases. RL Silva F.J., Institut Cavanilles de Biodiversitat i Biologia Evolutiva, RL Universitat De Valencia, APARTAT 22085 VALENCIA, 46071 , SPAIN. XX RN [2] RX DOI; 10.1128/JB.182.10.2967-2969.2000 RX PUBMED; 10781569. RA Jimenez N., Gonzalez-Candelas F., Silva F.J.; RT "Prephenate dehydratase from the aphid endosymbiont (Buchnera) displays RT changes in the regulatory domain that suggest its desensitization to RT inhibition by phenylalanine"; RL J. Bacteriol. 182(10):2967-2969(2000). XX FH Key Location/Qualifiers FH FT source 1..4371 FT /organism="Buchnera aphidicola" FT /host="Acyrthosiphon pisum" FT /mol_type="genomic DNA" FT /db_xref="taxon:9" FT CDS <1..323 FT /codon_start=3 FT /transl_table=11 FT /gene="yhbz" FT /product="putative GTP-binding protein" FT /db_xref="GOA:P57469" FT /db_xref="InterPro:IPR002917" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR006074" FT /db_xref="InterPro:IPR006169" FT /db_xref="InterPro:IPR014100" FT /db_xref="UniProtKB/Swiss-Prot:P57469" FT /protein_id="CAB90993.1" FT /translation="IRFLKHLERCKLLLHIIDLVPQNNCHPSDNIKTVLNELKKYSLKL FT YNKPRWFIFNKIDLLSVEEPNQIIKEIIFQFKIHEKYYLISSMKKIGIKKLCSDITKYL FT KK" FT CDS complement(391..783) FT /transl_table=11 FT /gene="rpsI" FT /product="30S ribosomal protein S9" FT /db_xref="GOA:P57470" FT /db_xref="InterPro:IPR000754" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="InterPro:IPR020574" FT /db_xref="UniProtKB/Swiss-Prot:P57470" FT /protein_id="CAB90994.1" FT /translation="MIQTQNYGTGRRKSSSARVFLRSGNGEIVVNKRSLNEYFGRETSC FT MIVRQPLELVDMVDKFNIYITVKGGGISGQAGAIRQGITRALIKYNQTLRFELRKAGFI FT TRDSRQVERKKVGFRKARKRPQFSKR" FT CDS complement(804..1232) FT /transl_table=11 FT /gene="rplM" FT /product="50S ribosomal protein L13" FT /db_xref="GOA:P57471" FT /db_xref="InterPro:IPR005822" FT /db_xref="InterPro:IPR005823" FT /db_xref="UniProtKB/Swiss-Prot:P57471" FT /protein_id="CAB90995.1" FT /translation="MKTFSIKSSNIKRHWYYVDATNKILGRLASALSFHLRGKHKTEYT FT PHLDTGDYIIVINASKILVTGNKRINKIYYHHTGYVGGIKQSRFEEMISSHPERVIEIA FT VKGMLPKGALGRSMFKKLKVFSNENHEHIAQCPQLLNI" FT CDS 1484..2641 FT /transl_table=11 FT /gene="aroQ/pheA" FT /product="chorismate mutase/prephenate dehydratase" FT /function="conversion of chorismate to phenylpyruvate in FT phenylalanine biosynthesis" FT /db_xref="GOA:P57472" FT /db_xref="InterPro:IPR001086" FT /db_xref="InterPro:IPR002701" FT /db_xref="InterPro:IPR008242" FT /db_xref="InterPro:IPR010952" FT /db_xref="InterPro:IPR018528" FT /db_xref="InterPro:IPR020822" FT /db_xref="UniProtKB/Swiss-Prot:P57472" FT /protein_id="CAB90996.1" FT /translation="MPANNSLLIFRDEINNIDKKIVKLLAERKNLVFKIAQSKIENNQA FT IRDIEREKKMLQKLIFLGKKYNLKSEYITQLFQLIIEESVATQKKLLKKFCNHNKLIPA FT NFSFLGPKGSYSHIAAYKYADLNFQKCITNECSTFEEVVLSVENNQSDYAVLPIENTCS FT GSINEVFDILKKTNLFIIGEINIFINHNLLTLKKIELNKIKTIYSHPQPFQQCSDFIKK FT FPEWKIKYTKSTADAMKKIKKYNDVTNAALGSEIGSKIYGLEILMKNLANKENNITRFI FT LLNRNPKKISKNIPTTTTLIFTTGQEAGSLSKVLSILQEKKLIMKKLTSQKIYKNPWEE FT MFYIDIQVNLSSTLMQDALEKIKKITRFIKILGCYPSEKITPIAP" FT CDS 2823..4178 FT /transl_table=11 FT /gene="ffh" FT /product="signal recognition particle 54Kd homolog" FT /db_xref="GOA:P57473" FT /db_xref="InterPro:IPR000897" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004125" FT /db_xref="InterPro:IPR004780" FT /db_xref="InterPro:IPR013822" FT /db_xref="UniProtKB/Swiss-Prot:P57473" FT /protein_id="CAB90997.1" FT /translation="MFNNLTQRLSDSLKKIINKGRLTEENIKETIREVRKALLEADVAL FT SVIKKFIENVKKKSIGHEINKSLTPGQEFIKIVKHELIFAMGEKNHSLNFSIEPPAVIL FT VVGLQGSGKTTSLAKLGKWIKNKYKKKILITSTDTYRAAAIEQLKILSDQIEIDFFESD FT KHNTPIEITKNAIKYAKLKLYDVLLIDTAGRLHIDKKMMNEIQQIQVISKAIETLLIVD FT SMMGQDAINMAKIFNNDLLISGIILTKTDGDSRSGIALSMRYITGKPIKFIGTGEKIIS FT LEPFHPERIADRILGMNDIMSLIEDIEEKVDQSQIQKLTKKLKKGHDFNLNDFLTQIKQ FT MKKIGGLNYFANKFSINHQLSNNTSLLNTDKNTLKKIEAMICSMTPKERIKPLIIKGSR FT KRRIALGSGTQIQDVNKLLKNFDDIRRIMKKIKTDGIAKVIRGIKNMLPKKF" FT CDS 4288..>4371 FT /transl_table=11 FT /gene="rpsP" FT /product="30S ribosomal protein S16" FT /db_xref="GOA:P57474" FT /db_xref="InterPro:IPR000307" FT /db_xref="UniProtKB/Swiss-Prot:P57474" FT /protein_id="CAB90998.1" FT /translation="MVKIRLARYGTKKRPFYKLVVADSRFSR" XX SQ Sequence 4371 BP; 1828 A; 540 C; 541 G; 1462 T; 0 other; gaattcgttt tttaaagcat ttagaaagat gcaaattatt acttcatatt attgatttag 60 ttcctcaaaa taattgtcat ccatcagata atataaagac tgtcttaaat gagttaaaaa 120 agtatagctt aaaattatat aataaaccga gatggttcat ttttaataaa atagacttat 180 taagtgtaga agaaccaaat caaataatta aagaaataat atttcaattt aaaatacatg 240 aaaaatatta tttgatttct tccatgaaaa aaataggtat caagaagttg tgttcagata 300 taactaaata cttgaaaaaa taaaaaagaa ctcggttcag taagaaaacc aagttctttt 360 taatcaaaac tacttacatc ttgttcaagt ttaacgttta gaaaattgcg gacgttttct 420 agcttttcgg aaaccgactt ttttacgttc aacttgacgc gaatcacgtg ttataaatcc 480 agcttttctt aattcaaaac gcaatgtttg attatattta attaaagcac gagtaatacc 540 ttgacgaatt gcacctgctt gaccagaaat acctcctcct tttaccgtaa tataaatatt 600 aaatttgtct accatgtcta ctaattctaa tggttgacgt acaatcatac aagaagtttc 660 acgaccaaaa tattcgttta aagaacgttt gtttacaaca atctctccat taccagatct 720 aagaaatact ctagcagaag agcttttacg acgaccggta ccatagtttt gagtttgaat 780 catttatttt atataccttt ctgtcaaata tttaataatt gaggacactg agctatatgt 840 tcatgatttt cattagaaaa aacttttaac tttttaaaca tagaacgtcc tagagcacct 900 tttggaagca taccttttac agcaatttca ataactcttt ctggatgact agaaatcatt 960 tcttcaaatc tagattgttt tataccacct acgtaacctg tatgatgata ataaatttta 1020 ttaatccttt tatttcctgt gactaatatt ttagaagcat ttataacgat gatataatca 1080 ccagtatcaa gatgcggagt atattctgtc ttatgtttcc ctctaagatg aaacgataat 1140 gcacttgcta atcggcctaa tattttattt gtggcatcta cataatacca atgtctttta 1200 atattacttg atttaattga aaaagttttc atataaaatc tacttaaatg tgattattta 1260 tatagaaaat aatactatga ttggcattaa taagatatag taaacatatt ttactaaaat 1320 atatttttaa agtatttata tatatcattt ctagaattaa attaattaaa tcaatcatat 1380 ttttaataat gatatatatt tttctgtatt aactttataa aaaattttta taaatattct 1440 attttatact cagatacatt atatctttta taggtaataa attatgcctg ctaacaattc 1500 cttgctaatc tttcgtgacg aaattaataa cattgataaa aaaatagtaa aattattggc 1560 cgaaagaaaa aatttagtat ttaaaatagc tcaatcaaaa atagaaaata atcaggcgat 1620 aagagatata gaacgtgaaa aaaaaatgtt gcaaaaatta atttttttgg ggaaaaaata 1680 caatttaaaa tccgaatata tcactcaatt atttcaacta ataattgaag aatctgtggc 1740 aactcaaaaa aagttattaa agaaattttg caatcataat aaattaattc ctgctaattt 1800 ttcatttctc ggtcctaaag gttcttactc tcatattgct gcttataaat atgcagatct 1860 caattttcaa aaatgtatta caaatgaatg ctcaacattt gaagaagtag ttctatcagt 1920 cgaaaataat caatcagatt atgctgtttt accaattgaa aacacctgtt ctggttctat 1980 taatgaagtt tttgatattt taaaaaaaac taatttattt attattggag aaattaatat 2040 ttttataaac cataatttac ttactcttaa aaaaattgaa ctaaataaga ttaaaacaat 2100 atatagtcat cctcagccat ttcaacaatg cagtgatttt attaaaaaat ttccagaatg 2160 gaaaattaaa tatactaaga gtactgcaga tgcaatgaaa aaaattaaga aatataatga 2220 cgtaactaat gcagcattag gaagcgaaat aggaagcaaa atttacggat tagaaatatt 2280 aatgaaaaat ttagcaaata aagaaaataa tattacgaga tttattttat taaatcgcaa 2340 tcctaaaaaa atttctaaaa acataccaac tacaacaaca ttaatattta ctacaggaca 2400 agaagcagga tctctttcta aagtattatc aatattgcaa gaaaaaaaat taattatgaa 2460 aaaattaact tctcaaaaaa tttacaaaaa tccatgggag gaaatgtttt atattgatat 2520 tcaagtcaat ttatcatcaa cactaatgca agatgctctt gaaaaaatca aaaaaattac 2580 tagatttata aaaattttag gctgttatcc tagtgaaaaa ataacaccaa tagcaccgta 2640 aaatttctaa aaaacgattt ttttttaaga aaatataaat catgcgttca aatatgaaaa 2700 atttttttaa taatttttaa aaataaaaga taattatttt ttaattaaca gaaattatat 2760 tttaaaggtg attgttttta cctcaaataa aatattaata aatttaatgt gagtaataaa 2820 taatgtttaa taatttaact caacgtcttt cagatagttt aaaaaaaatt ataaataaag 2880 gaagacttac cgaagaaaac attaaagaaa ctataagaga agttcgaaaa gctttattag 2940 aagcagatgt ggctttatca gtaataaaaa aatttataga gaatgtaaaa aaaaaatcaa 3000 ttgggcatga aatcaataaa agtttaactc ccggacaaga atttataaaa atagttaaac 3060 atgaattaat atttgcaatg ggtgaaaaaa atcattcttt aaatttttcc attgaacccc 3120 ctgcagttat attagtagtt ggtctgcaag gttcaggaaa aactactagt ttagctaaat 3180 tgggaaaatg gattaaaaat aagtataaaa aaaaaatatt aattacatct accgatacct 3240 atcgtgcggc tgctattgaa caactaaaaa tattatctga tcaaatcgag atagattttt 3300 ttgagtctga taagcacaat acaccaatag aaatcactaa aaatgcgata aaatatgcaa 3360 aattaaaatt atatgacgtg ctattaattg acacagcagg tcgtttgcat attgataaaa 3420 aaatgatgaa tgaaattcag caaatacaag ttatatcaaa agctattgaa acattattaa 3480 tagtagattc aatgatgggg caagatgcaa taaacatggc aaaaatattt aataatgatt 3540 tattgatatc tggtataata ttaactaaaa cagatggtga ttctaggagt ggaattgctc 3600 tatctatgcg ttacattaca ggaaaaccta ttaaatttat aggaacaggg gaaaaaataa 3660 tatcattaga accatttcat cctgaaagaa tagctgatag aattctagga atgaatgata 3720 ttatgtcgct tattgaagac attgaagaaa aagtagatca atctcagatt caaaaactaa 3780 caaaaaaatt aaaaaaaggt catgatttta atttaaatga ttttttaaca caaattaaac 3840 aaatgaaaaa aataggaggt ttaaattatt ttgcaaataa attctctatc aatcatcaat 3900 tatctaataa tacatcatta ttaaacacag ataaaaatac tttaaaaaaa atagaagcaa 3960 tgatatgttc gatgacacct aaagaaagaa taaaaccttt aattataaaa ggttcaagaa 4020 aacgcagaat agctttaggt tctggaacac aaatacaaga cgtcaacaaa ttattaaaaa 4080 attttgatga tatacgaaga attatgaaaa aaattaaaac tgatggaata gccaaagtaa 4140 tacgtggaat aaaaaatatg ctacctaaaa agttttgaaa aattgtctta aaaatataaa 4200 aaaattttat aaaatctcag tagtataatt tttttaattt ttttcaaata atccttttta 4260 tttaataact ttttaagaag aaaaaatatg gtaaaaattc gtttagctag atatggaaca 4320 aaaaaacgtc cattttataa gctggtagta gcagatagtc gtttttctag a 4371 // |
|