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EBI DbfetchID AJ238748; SV 1; linear; genomic DNA; STD; PRO; 3152 BP. XX AC AJ238748; XX DT 23-AUG-1999 (Rel. 60, Created) DT 12-JUN-2006 (Rel. 88, Last updated, Version 3) XX DE Clostridium stercorarium ramA gene for alfa-L-rhamnosidase XX KW alfa-L-rhamnosidase; ramA gene. XX OS Clostridium stercorarium OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-3152 RA Zverlov V.V.; RT ; RL Submitted (20-MAY-1999) to the EMBL/GenBank/DDBJ databases. RL Zverlov V.V., Institute for Microbiology, Technical University Muenchen, RL Arcisstr. 21, Muenchen D-80290, GERMANY. XX RN [2] RX DOI; 10.1046/j.1365-2958.2000.01691.x RX PUBMED; 10632887. RA Zverlov V.V., Hertel C., Bronnenmeier K., Hroch A., Kellermann J., RA Schwarz W.H.; RT "The thermostable alpha-L-rhamnosidase RamA of Clostridium stercorarium: RT biochemical characterization and primary structure of a bacterial RT alpha-L-rhamnoside hydrolase, a new type of inverting glycoside hydrolase"; RL Mol. Microbiol. 35(1):173-179(2000). XX FH Key Location/Qualifiers FH FT source 1..3152 FT /organism="Clostridium stercorarium" FT /strain="NCIB 11754" FT /mol_type="genomic DNA" FT /db_xref="taxon:1510" FT RBS 98..102 FT /gene="ramA" FT CDS 112..2736 FT /transl_table=11 FT /gene="ramA" FT /product="alfa-L-rhamnosidase" FT /EC_number="3.2.1.40" FT /db_xref="GOA:Q9S3L0" FT /db_xref="InterPro:IPR013737" FT /db_xref="UniProtKB/TrEMBL:Q9S3L0" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAB53341.1" FT /translation="MMRVYNLKTNRIKNPMGFVINKPKLSWLVESDTAKHQVAAQVEIS FT ADINFENIIFDSGKRTDIDSISYSPQVELKPRTRYYWRVRVWGDDGSEAVSEAAWFETS FT KMDEPWKAKWITPDFDPSVHPVVFTDFSIERDVADARAYVCGLGLYEMSVNGEKTGDEY FT LAPGLVAYDKWIPYQTYDITSQLKKGINTAEFLLGNGWYKGRYGLNRKQPFRYGNEFAL FT ICEIHITYQDGTADVIYTDTSWKARKSKVIDSGIYDGEIYDDTFCDDAVYPVRIADLDV FT NKLEPRRSPGIKIKERIKPAEIIRTPEGETVIDMGQNMVGWLEFTNRAPKGAEIMLQFG FT EVLQDGNFYRDNLRTAKCEFHYISDGKVKKVRPHFTFYGFRYVKLTKWEGEVNPEDFTG FT LVLYSDLERTGNITTDNSLVNRLFLNALWSQKGNFLDVPTDCPQRDERMGWTGDAQVFS FT GAAAFNMDVFAFFGKYLYDLKQEQKARGGNVPVVVPAHDVKQNGACGWGDAAVIIPWNM FT YLHYGDVSILEQQYKSMKGWVDYIKSKDDAAGGRRLWLNDFHYGDCVSLDVEDPFNRFG FT GTEHAYLASAFYSYSAGIVSKAAKILNKKEDAEYYRKLSEEVKNAIRKEYFTPTGRLAV FT NTQTAYVIALYMDLVPDEWKERVAFELRKKLKETKYHLRTGFLGTPYLCRVLSEYGSND FT IAYRLLTNTDYPGWLYPVTMGATTIWERWNSMLPDGKVSDTGMNSFNHYSYGSIVEWIY FT RNAAGIQPVEDAPGFRRFRLKPQPHYLLKSLDAEFLSPAEKIISRWNINENGSVSFYFR FT IPFNTTAELVLPDTEVQDWKEFMSLNVVNILILTCLKDLTRKCTEQILQCGKFMKMRGQ FT KKL" XX SQ Sequence 3152 BP; 947 A; 608 C; 806 G; 791 T; 0 other; aacggcgttg tataataaca gtggagtgat ttaacaggct ccactgttaa attttatgcc 60 tgcaaaacct cagtgtaatg ttaaaaattc tgtaccaagg ggcaaatgga aatgatgaga 120 gtttataact taaaaacaaa tcgtattaag aatcctatgg ggtttgtcat taataaacca 180 aaactgtcgt ggttagttga gtctgatacg gcaaaacacc aggtcgcagc ccaagttgag 240 atatccgccg atataaattt tgagaatatc atatttgaca gcggaaaaag aactgatatc 300 gacagtattt catattcacc gcaggtagaa ttaaaaccgc gcacaaggta ctactggagg 360 gtcagggtgt ggggagatga cggaagtgaa gccgtaagtg aagctgcgtg gtttgaaacg 420 tccaaaatgg acgaaccatg gaaagcaaaa tggattacgc ccgactttga tccttcagtc 480 catcctgtcg ttttcaccga tttcagcatc gaaagggatg ttgccgacgc acgggcatat 540 gtctgcgggc tgggattgta tgaaatgtcg gtgaacggtg aaaaaaccgg agatgaatat 600 ttggcgccgg ggcttgtggc atatgacaaa tggatacctt accagacgta tgatataacc 660 agtcagctga aaaagggaat caataccgcc gaattcctgc ttggcaacgg gtggtataag 720 ggacgttacg gactgaacag gaaacagcct ttcaggtacg gcaacgaatt tgctttaatc 780 tgtgaaattc acataactta tcaggacggt actgcggacg tcatttatac cgacacaagc 840 tggaaggcgc gaaaatcaaa agtcattgac agcggtatct atgacgggga gatttatgac 900 gacacttttt gtgacgatgc cgtttatccg gtaagaattg cagacctgga tgtaaataaa 960 cttgagccga gaagaagccc agggattaaa ataaaggaac gcataaagcc ggcggaaatc 1020 atccggaccc ctgaaggcga aacggttatc gacatggggc agaacatggt gggatggctt 1080 gagtttacga accgtgcgcc aaaaggcgcg gaaataatgc ttcagttcgg ggaagttcta 1140 caggacggca atttttacag agacaatctg cggacggcta aatgcgaatt tcattatatt 1200 tcagatggta aggtgaaaaa ggtaagacct cattttacct tttacggttt cagatatgta 1260 aaacttacaa agtgggaagg tgaagtgaat ccggaagact ttaccggact tgttctgtat 1320 tccgacttgg agagaaccgg aaatattacc acagataatt ctcttgtaaa caggctgttc 1380 cttaatgctt tatggagcca gaaggggaat ttccttgatg ttcccaccga ctgccctcag 1440 agggacgaaa gaatgggatg gacgggcgac gctcaggtct tttcaggggc tgcggcgttt 1500 aacatggatg tatttgcgtt ttttggcaaa tatctttacg accttaaaca agaacagaag 1560 gcacgcggcg gtaacgtacc cgtagttgta ccagcccatg atgtgaaaca gaatggggca 1620 tgcggatggg gcgacgctgc cgtaatcatt ccgtggaaca tgtacctgca ctacggcgat 1680 gtttcaatcc tggaacagca gtataaaagc atgaagggat gggttgacta tataaaaagc 1740 aaggatgacg cggccggagg aagaagactg tggctaaacg attttcatta cggtgactgc 1800 gtgtcgctgg acgtggaaga cccgttcaac cggtttggtg gcacggagca cgcatatctt 1860 gccagtgcat tttacagtta ttctgccggt attgtttcaa aggcggctaa aattttgaac 1920 aaaaaggaag acgccgaata ttaccgcaaa ctttccgaag aagtaaaaaa tgccatcagg 1980 aaagaatatt tcacaccgac aggacggttg gcagtaaata ctcaaaccgc gtatgtcatt 2040 gctctttaca tggatcttgt ccccgatgaa tggaaggaac gagttgcctt tgaactgagg 2100 aaaaagctca aagagaccaa atatcacctg cggacaggtt ttcttggcac accgtattta 2160 tgccgtgttc tgtccgaata cggaagcaat gacattgcgt accggcttct gacaaacacc 2220 gactatccgg ggtggctgta tcctgttaca atgggggcaa caacaatatg ggagagatgg 2280 aattcaatgc tgcccgacgg aaaagtcagc gataccggca tgaattcctt caatcattat 2340 tcctatggct caattgtgga atggatttac agaaatgcgg caggaataca gcccgttgaa 2400 gatgctcctg ggttcaggcg tttcaggctt aaaccgcagc cgcattacct cttgaagtca 2460 cttgatgcgg aatttttatc acctgcagaa aaaatcataa gcagatggaa tattaatgaa 2520 aacggctcgg tttcgttcta tttcaggatt cctttcaata ccaccgccga actggttttg 2580 cccgataccg aagtacagga ctggaaggag ttcatgagct tgaatgtggt gaatatactt 2640 atacttacat gcctaaaaga ccttacaaga aaatgtacgg aacagatact ccaatgcggg 2700 aaatttatga aaatgagagg gcaaaagaaa ttgtaacagc ttatctgtcc gaaatggcag 2760 gctggatgct gttcccgatg ttcgcgggcg aacgcagcat tcgtgatttt gtcagggaag 2820 ggcttttgca gattgatgaa aaaacgctga aagaaattga cgaaaaactc agcaaagtta 2880 ctgtggaata aagttttaac cttaacggcg gtggaatact ccaccgtctg ttaaatttga 2940 aatcagtccg gttaattttt ttaactgaac ggggggcggg atgatatgaa ttctgtgagc 3000 gtgggatatt ataacgcggt aagggaatat atctccgaga atattgacag ggcatttaag 3060 tcgccgaatg atcttttcaa atatccgttt atagatccgg gttcagttta tgacggcaac 3120 ctttgggact gggattcctt ctggagcgtt ta 3152 // |
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