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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ238623; SV 1; linear; mRNA; STD; PLN; 1113 BP.
XX
AC   AJ238623;
XX
DT   07-JAN-2000 (Rel. 62, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Senecio vernalis mRNA for homospermidine synthase (HSS1 gene)
XX
KW   homospermidine synthase; hss1 gene.
XX
OS   Senecio vernalis
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; campanulids; Asterales; Asteraceae; Asteroideae; Senecioneae;
OC   Senecio.
XX
RN   [1]
RP   1-1113
RA   Ober D.;
RT   ;
RL   Submitted (05-MAY-1999) to the EMBL/GenBank/DDBJ databases.
RL   Ober D., Pharmazeutische Biologie, Technische Universitaet Braunschweig,
RL   Mendelssohnstrasse 1, D-38106 Braunschweig, GERMANY.
XX
RN   [3]
RX   DOI; 10.1073/pnas.96.26.14777
RX   PUBMED; 10611289.
RA   Ober D., Hartmann T.;
RT   "Homospermidine synthase, the first pathway-specific enzyme of
RT   pyrrolizidine alkaloid biosynthesis, evolved from deoxyhypusine synthase";
RL   Proc. Natl. Acad. Sci. U.S.A. 96(26):14777-14782(1999).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1113
FT                   /organism="Senecio vernalis"
FT                   /mol_type="mRNA"
FT                   /tissue_type="root"
FT                   /db_xref="taxon:93496"
FT   CDS             1..1113
FT                   /transl_table=1
FT                   /gene="HSS1"
FT                   /product="homospermidine synthase"
FT                   /function="pyrrolizidine alkaloid biosynthesis"
FT                   /EC_number="2.5.1.45"
FT                   /db_xref="GOA:Q9SC13"
FT                   /db_xref="HSSP:1DHS"
FT                   /db_xref="InterPro:IPR002773"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9SC13"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAB65462.1"
FT                   /translation="MAESNKEAIDSARSNVFKESESLEGTCAKIGGYDFNNGIDHSKLL
FT                   KSMVSTGFQASNLGDAMIITNQMLDWRLSHDEVPENCSEEEKKNRESVKCKIFLGFTSN
FT                   LISSGVRETICYLTQHRMVDVLVTTTGGIEEDFIKCLASTYKGKFSLPGADLRSKGLNR
FT                   IGNLIVPNDNYIKFEDWIIPIFDQMLIEQKTQNVLWTPSRMIARLGKEINNETSYLYWA
FT                   YKNNIPVFCPSITDGSIGDMLYFHSVSNPGPGLVVDIVQDVIAMDNEAVHASPQKTGII
FT                   ILGGGLPKHHICNANMMRNGADFAVFINTAQEYDGSDSGARPDEAVSWGKISSTGKAVK
FT                   VHCDATIAFPLLVAETFAVKKEKASKVNGF"
XX
SQ   Sequence 1113 BP; 343 A; 206 C; 259 G; 305 T; 0 other;
     atggccgagt caaacaaaga agcaatcgac agtgcgaggt ctaatgtatt caaggaatcc        60
     gagagtttag aaggcacttg tgctaaaatt ggtgggtacg atttcaacaa tggcattgat       120
     cactcaaagc ttcttaaatc catggtttca accggattcc aagcttctaa tcttggtgat       180
     gctatgataa tcacaaatca aatgctggat tggaggctat ctcatgacga agtaccagaa       240
     aattgtagcg aggaggagaa gaagaaccga gagtctgtca agtgcaaaat cttcctaggg       300
     tttacatcaa acctcatttc atcgggtgtt cgggagacta tttgttatct aactcaacat       360
     cgtatggtcg atgtgcttgt gacaacaaca ggtggcattg aggaagattt cataaaatgc       420
     ctagcaagca catacaaagg aaaattttct ttacccggag ctgatttgag atcgaaaggg       480
     ttaaatcgca ttggtaactt gatagtgcct aatgataatt acatcaagtt cgaggactgg       540
     attatcccaa tttttgacca aatgctgata gaacaaaaaa cacagaatgt attgtggacc       600
     ccatcaagaa tgatagcacg tttagggaag gaaattaata acgagacttc atatctgtat       660
     tgggcatata agaacaatat ccccgtcttc tgcccctcaa taacagatgg ctctatcgga       720
     gacatgttat acttccattc agtttccaat ccaggtccag gtcttgttgt cgatatcgta       780
     caagatgtca tagcgatgga taatgaggct gtgcatgcaa gtcctcagaa gactgggata       840
     atcattttag gaggagggtt accaaagcat cacatttgca atgcgaatat gatgcgtaat       900
     ggcgcagatt tcgctgtttt tatcaacacc gcccaggagt atgatggtag tgattctggc       960
     gctcgtcctg atgaagccgt ctcatggggg aaaattagta gtacgggtaa agctgtgaag      1020
     gtgcactgtg atgcaactat tgcattcccg ttgcttgttg ctgaaacctt tgccgtaaag      1080
     aaagagaagg catctaaagt caatggtttt taa                                   1113
//
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