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EBI DbfetchID AJ237788; SV 2; linear; genomic DNA; STD; PRO; 3095 BP. XX AC AJ237788; X96552; XX DT 14-APR-1999 (Rel. 59, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Salmonella enterica tyrB (partial), aphA, yjbQ, yjbR and uvrA (partial) DE genes and ORFW XX KW acid phosphatase; aphA gene; excinuclease; tyrB gene; KW tyrosine aminotransferase; uvra gene; yjbQ gene; yjbR gene. XX OS Salmonella enterica OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Salmonella. XX RN [1] RP 1-3095 RA Rossolini G.M.; RT ; RL Submitted (14-APR-1999) to the EMBL/GenBank/DDBJ databases. RL Rossolini G.M., Dipartimento di Biologia Molecolare, sez. Microbiologia, RL University of Sienna, Policlinico "Le Scotte", 53100-Sienna, ITALY. XX RN [2] RX DOI; 10.1111/j.1574-6968.1999.tb08821.x RX PUBMED; 10564784. RA Thaller M.C., Schippa S., Bonci A., Berlutti F., Selan L., Rossolini G.M.; RT "Genetic rearrangements in the tyrB-uvrA region of the enterobacterial RT chromosome: a potential cause for different class B acid phosphatase RT regulation in Salmonella enterica and Escherichia coli"; RL FEMS Microbiol. Lett. 181(1):17-23(1999). XX FH Key Location/Qualifiers FH FT source 1..3095 FT /organism="Salmonella enterica" FT /strain="STY4" FT /variety="typhi" FT /mol_type="genomic DNA" FT /db_xref="taxon:28901" FT CDS <1..261 FT /codon_start=1 FT /transl_table=11 FT /gene="tyrB" FT /product="tyrosine aminotransferase TyrB" FT /EC_number="2.6.1.57" FT /db_xref="GOA:Q9X964" FT /db_xref="HSSP:3TAT" FT /db_xref="InterPro:IPR000796" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q9X964" FT /protein_id="CAB40973.2" FT /translation="VDAMRTRIISMRQTLVKELKAEMPDRNFDYLLQQRGMFSYTGLSA FT EQVDRLRDEFGVYLIASGRMCVAGLNASNVHRVAKAFAAVM" FT RBS 435..439 FT /gene="aphA" FT CDS 445..1155 FT /transl_table=11 FT /gene="aphA" FT /product="class B acid phosphatase AphA" FT /EC_number="3.1.3.2" FT /db_xref="GOA:O08430" FT /db_xref="InterPro:IPR005519" FT /db_xref="InterPro:IPR010025" FT /db_xref="UniProtKB/Swiss-Prot:O08430" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAB40974.1" FT /translation="MKKITLLSAVCLLFTLNHSANALVSSPSTLNPGTNVAKLAEQAPV FT HWVSVAQIENSLTGRPPMAVGFDIDDTVLFSSPGFWRGKKTYSPDSDDYLKNPAFWEKM FT NNGWDEFSIPKEVARQLIDMHVRRGDSIYFVTGRSQTKTETVSKTLADNFHIPAANMNP FT VIFAGDKPGQNTKVQWLQEKNMRIFYGDSDNDITAARDCGIRGIRILRAANSTYKPLPQ FT AGAFGEEVIVNSEY" FT sig_peptide 445..510 FT /gene="aphA" FT mat_peptide 511..1152 FT /gene="aphA" FT /product="class B acid phosphatase AphA" FT /EC_number="3.1.3.2" FT CDS 1285..1701 FT /transl_table=11 FT /gene="yjbQ" FT /product="hypothetical protein yjbQ" FT /db_xref="InterPro:IPR001602" FT /db_xref="UniProtKB/Swiss-Prot:P0A2L2" FT /protein_id="CAB40975.1" FT /translation="MWYQRTITLSEKPRGFHLITDEITDKLSGLPPVETGLLHLLLLHT FT SASLTLNENCDPTVRADMERHFLKPFPDNAAYEHDYEGADDMPSHIKSSVLGVSLLLPV FT RQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQGE" FT CDS 1704..2060 FT /transl_table=11 FT /gene="yjbR" FT /product="hypothetical protein YJBR" FT /db_xref="InterPro:IPR007351" FT /db_xref="UniProtKB/TrEMBL:Q7B1X1" FT /protein_id="CAB40976.1" FT /translation="MTISELLQYCMAKPGAEQSVHSDWKATQIKVEDVLFAMVKEVDGR FT PAASLKTSPELAELLRQQHSDVRSSRHLNKAHWSTVYLDGSLPDSQLYYLVDASYQQAV FT NALSEDKRKQLPQS" FT CDS complement(2386..2829) FT /transl_table=11 FT /product="hypothetical protein" FT /note="ORFW" FT /db_xref="UniProtKB/TrEMBL:Q9X967" FT /protein_id="CAB40977.1" FT /translation="MKLPYAITLLLCLFLSACTLPDRFSAVAFQQLTLLQARSTRFLQD FT AARIPWQKETLLKDDRDIRQTFFQAERVARQGGDKHRLDNLALLKNHYLRLYARVMKCK FT QPLTYIQAERYQQQNNQVWKLAIQGECLHWGARCTQGEENGVY" FT mat_peptide complement(2389..2778) FT /product="hypothetical protein" FT /note="ORFW" FT sig_peptide complement(2779..2829) FT /note="ORFW" FT CDS complement(2973..>3095) FT /transl_table=11 FT /gene="uvrA" FT /product="excinuclease UvrA" FT /db_xref="UniProtKB/TrEMBL:Q9X968" FT /protein_id="CAB40978.1" FT /translation="VDLGPEGGSGGGEILVAGTPETVAECEASHTARFLKPMLK" XX SQ Sequence 3095 BP; 746 A; 768 C; 832 G; 749 T; 0 other; gtcgacgcga tgcgtacccg cattatatcg atgcgccaga cgctggtgaa agagctgaag 60 gcggagatgc ctgaccgcaa cttcgattac ttgttacagc agcgtggtat gttcagctat 120 accgggttaa gcgcggagca ggtcgatcgg ttgcgcgatg agtttggcgt ttacctgatt 180 gccagtggcc gcatgtgtgt cgctgggctt aatgcttcaa atgtacaccg tgtggcgaag 240 gcatttgccg ctgtcatgta atattcaggc cggacggcga taacagtgct ctccggtctg 300 acaatagctg ttgtgatcat cctctttttt cgtaaaaaac cgcaaataat cttcctttga 360 ccgttactgg cgttatggtc agatagtttt ttgaccaaag actcatctta ataattataa 420 tattttgaat tttaagggaa aagcatgaaa aaaataaccc tgctgagcgc cgtctgttta 480 ttgtttacgc taaaccattc cgcgaatgcg ttagtatctt ccccttcgac gctcaatccg 540 ggcactaatg ttgcaaaact cgcggaacaa gcacctgtcc attgggtctc tgtcgcccag 600 attgaaaaca gcctgaccgg acgcccgccg atggcggtcg gctttgatat tgacgacacc 660 gtgttatttt ccagccccgg attctggcgc ggaaagaaaa cctattcccc ggacagcgac 720 gattatctga aaaatccggc cttttgggaa aaaatgaaca acggctggga tgagttcagt 780 attccaaaag aagtggcccg acagctcatt gatatgcatg ttcgccgtgg cgacagtatt 840 tactttgtca ctggtcgtag tcagacgaaa acggaaactg tgtcgaaaac gctggcggat 900 aacttccata ttccggcggc gaatatgaat ccggtgattt tcgccggcga taaaccggga 960 caaaatacga aagtccagtg gctgcaggag aagaacatgc gtatcttcta cggcgattcg 1020 gataacgata ttaccgcagc tcgtgattgt ggtatccgcg gtattcgtat cctgcgcgcg 1080 gctaactcca cctacaaacc gctgccgcag gcaggagcgt ttggcgagga agtcattgtc 1140 aactcggagt actaaaaatc aggagagcga caggctctcc ttttttgcat gatttttttg 1200 cacaaacttg ccccgctggc tttacctttt ccagacttgc tgcacactat tcaggagacg 1260 tttgttttta ggaaggagca gcctatgtgg tatcagcgca ccattacact gagcgagaag 1320 ccgcgcgggt ttcatctaat aacagatgaa attaccgata aattgtctgg cttaccgcct 1380 gtcgaaacgg gtttgctgca tctgttgttg ctacatacct cggcctcgct gacgttaaac 1440 gaaaactgcg atcccaccgt gcgcgctgat atggagcgcc atttcctgaa accgttcccc 1500 gataatgcgg cgtatgaaca tgattacgaa ggggcggatg acatgccttc gcatattaag 1560 tcgtcagtat tgggcgtctc gttgctgctg cctgtacgcc aggggcgttt acagttagga 1620 acatggcaag gtatctggtt gggagagcac cgtattcacg gcggtccacg taaaatcatc 1680 gcgacactac aaggggaatg ataatgacca tttcggaatt actgcaatac tgcatggcaa 1740 aacctggcgc agagcagagc gttcacagcg actggaaagc gacgcaaatt aaagtggaag 1800 atgtactttt cgcgatggta aaagaagttg atgggcgccc ggcagcctct ctcaaaacca 1860 gcccggaact ggcagagttg ttacgccagc agcacagcga tgttcgatcg agtcggcacc 1920 ttaataaagc gcactggagt acggtctatc tggacggctc gctgccggat tcacaactct 1980 attatctggt cgatgcctct tatcaacagg cggtaaatgc gctgtcggaa gataaacgca 2040 agcagttgcc gcagtcctga ttatagcgcg ccgaccaaca acgccagggc gatatcaatg 2100 aggtggatga ccgtagccgg atacggctgc cgagggcaat ttgcgcatta ttggcgcgta 2160 gcctggcgag gtcccgctgt ccttccagca gaataatcat atcgtcgtcg tccagccagc 2220 cgcgagcatg ttcctgaagc gcgcgggcga taaacgcggc ggactcgcgg ataccgtcgt 2280 cgctgtcttc tcttgcctgc ttatacgtct ggataaaact cggcaattgc cgaggaggct 2340 acaggatgtt cggcccgggc ggcagtaaac aggttacgta tttcgttaat agacgccatt 2400 ttcttctccc tgagtgcagc gggcgcccca atgcagacac tcaccctgta tggctaattt 2460 ccagacctga ttattttgct gttggtatct ctcagcctgg atgtaagtaa gtggttgctt 2520 acatttcata acccgcgcat aaagacgcaa atagtgattt ttcagcagcg ccagattatc 2580 gagtcggtgt ttatccccac cttgacgggc gacccgctca gcctgaaaaa atgtctggcg 2640 gatatcgcgg tcatctttga gcagtgtctc tttttgccac ggtattcgcg ccgcgtcctg 2700 caggaagcgg gttgagcgcg cttgtaatag cgtcagttgt tgaaaagcca cggcgctaaa 2760 gcggtcaggc agcgtacagg cggataaaaa caggcacagc agtagtgtga ttgcgtaggg 2820 caacttcatg gtgttttcca taacagaccg tttgcgctat cacatgtcag agcgaggcgg 2880 cacgcaaatc acaaatgctc aacacggata caatgaggtg ggatgaggaa aaatgatgcc 2940 gcttcccggc gaatcggaaa gcggtgtgaa ggttatttga gcataggttt aaggaagcgg 3000 gcggtatgcg acgcctcgca ctccgccacg gtttccggcg taccggcgac gagaatttcg 3060 ccgccgccgc tgccgccttc cgggccgagg tcgac 3095 // |
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