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EBI Dbfetch

ID   AJ133737; SV 1; linear; genomic DNA; STD; PRO; 2000 BP.
XX
AC   AJ133737;
XX
DT   17-MAR-1999 (Rel. 59, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Paenibacillus polymyxa sacB gene
XX
KW   levansucrase; sacB gene.
XX
OS   Paenibacillus polymyxa
OC   Bacteria; Firmicutes; Bacillales; Paenibacillaceae; Paenibacillus.
XX
RN   [1]
RP   1-2000
RA   Aymerich S.;
RT   ;
RL   Submitted (16-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Aymerich S., Genetique Moleculaire et Cellulaire, Institut National de
RL   Recherche Agronomique, C.B.A.I., F-78850 Thiverval-Grignon, FRANCE.
XX
RN   [2]
RX   DOI; 10.1046/j.1462-2920.2000.00114.x
RX   PUBMED; 11200435.
RA   Bezzate S., Aymerich S., Chambert R., Czarnes S., Berge O., Heulin T.;
RT   "Disruption of the Paenibacillus polymyxa levansucrase gene impairs its
RT   ability to aggregate soil in the wheat rhizosphere";
RL   Environ. Microbiol. 2(3):333-342(2000).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2000
FT                   /organism="Paenibacillus polymyxa"
FT                   /strain="CF43"
FT                   /mol_type="genomic DNA"
FT                   /country="France:Parisian basin"
FT                   /db_xref="taxon:1406"
FT   RBS             312..319
FT                   /gene="sacB"
FT   CDS             328..1827
FT                   /transl_table=11
FT                   /gene="sacB"
FT                   /product="levansucrase"
FT                   /db_xref="GOA:Q9Z5E5"
FT                   /db_xref="HSSP:1OYG"
FT                   /db_xref="InterPro:IPR003469"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Z5E5"
FT                   /protein_id="CAB39327.1"
FT                   /translation="MKFNKWFSKAATATVATTLLLGGGVQAFAEENDASDLKTDNAFTQ
FT                   ITRNDMLNIFKQQGKEKYEVPSFDASTIKNIPSAMGRDSSGKLIDFDVWDSWPLQNADG
FT                   TVANYKGYNIVFGLAGDPKRGEDTFIYLFYQKAGNTSLSGWKKAGRVFKDNDKLLANDP
FT                   ILKNQSEEWSGSATLTSDGQVRLFYTSRQPYDPNNNLYGKQTLSTAQINVSQPDDKTLK
FT                   IDGVEDLKSIYDGGDGKIYQNVQQSVGVDMDNHTFRDPHYVEDQGHKYIIFEANTGTET
FT                   GYQGEDSIQNPAYYGGNKKFFTEEQQNLLQSPKKKGAELANGALGIVELNDDYTLKNVM
FT                   PPLIASNLVTDEIERANVFKMNGLWYLFTSTRGSKVTVDAIGDDDIYMLGYVSTSLTGP
FT                   YKPLNGTGLVLHQDLDRDDVTWTYAHFAIPQGKGNNVVVSSYMTNRGLFPDHKSTFAPS
FT                   FLLNIKGSKTSVVKNGILEQGQITVDPTNDKKESPNEYGKK"
XX
SQ   Sequence 2000 BP; 657 A; 378 C; 457 G; 508 T; 0 other;
     aacccgctta caaatcgggc tttgtatgat ttattttaga acgattttgt atgtgaatga        60
     agcaaccaac ctagcaaaat gggacacgga aaaaaatcaa gtagcaaatt tttctggatg       120
     taataggaat gaaaaaaaag ggattttcag aaaaattact aggaaaatat gaggatgaaa       180
     ttcatagagg aacctgtttt ctcacctcac ataatagggc ttttcagtct atatcaatcg       240
     tttgacatac catataaaat ggccctacca accaaaaagt tgggtttcaa atctagaagc       300
     ataattagat taagggagat ggagtacttg aagtttaaca aatggttcag taaagcagcc       360
     actgcaacag tagcaactac cttgctgtta ggaggcggcg ttcaggcttt tgccgaggaa       420
     aatgatgcat ctgatctcaa aacagacaat gcatttacgc aaattacgcg taatgacatg       480
     ctgaatattt tcaaacagca aggcaaagag aaatatgagg ttccgtcctt cgatgcgtct       540
     acaattaaga atattccttc tgctatgggt cgcgacagct caggtaagct gattgatttc       600
     gatgtctggg actcttggcc gttacaaaat gccgatggca cagtagccaa ttacaagggg       660
     tacaatatcg tttttggact ggcaggcgat cctaaaagag gcgaggatac attcatatac       720
     ctgttctatc aaaaagcggg caatacttca ctgagcggct ggaaaaaagc tggccgagta       780
     tttaaagaca atgataaact gcttgccaac gatccgattc taaaaaatca gtcagaagaa       840
     tggtcaggtt cagctacctt aacctctgat ggacaagtac gtttattcta taccagcaga       900
     cagccatatg atccgaataa caatttatac ggcaagcaaa ccttgagcac ggctcaaatt       960
     aatgtctctc agcctgatga taagacactg aaaatagatg gagtcgagga tttgaaatcg      1020
     atctatgacg gtggagatgg gaaaatatac caaaatgtac agcaaagcgt cggagtggat      1080
     atggataatc atacctttag agaccctcac tatgtcgagg atcaaggcca caaatatatt      1140
     atatttgaag ccaacacagg gacagaaaca ggctatcagg gcgaagattc gattcaaaac      1200
     ccagcttatt atggcggcaa taagaaattt ttcacggaag agcaacaaaa cctgctgcaa      1260
     agccctaaga aaaagggagc tgagctggcg aacggcgcac tgggtatcgt tgaattgaat      1320
     gatgattata cgttgaaaaa tgtaatgcct cctttgattg catccaatct ggtaacagat      1380
     gaaattgaac gggcgaatgt gttcaaaatg aacggtttgt ggtatttatt tacgagtacg      1440
     agaggttcca aggtgactgt agatgcgatc ggtgacgatg atatttacat gctgggttat      1500
     gtttctactt ccttgacagg gccttataaa ccgctgaatg gaaccggtct cgttcttcac      1560
     caggatctgg atcgtgatga tgttacctgg acgtatgccc attttgctat cccgcaaggc      1620
     aaaggcaata acgtagtcgt gtcgagctat atgaccaatc gtgggctttt cccggatcac      1680
     aaatctactt tcgcgccaag cttcctgctg aatattaaag gctcgaaaac gtctgttgtg      1740
     aaaaacggta ttttggagca agggcaaatc acggttgatc caacgaatga caaaaaagaa      1800
     tctccaaatg agtatggcaa gaaataagta ggtataagca gtatgtccga agcggcggct      1860
     tggtagctta ccgatctgtc gtccatcgga cgatacataa cgatgcaatg agaggtaagg      1920
     aggatcgtca taatgagaaa aaaagctccc aagaacattt ggatacgatc cgtagtagtc      1980
     atcacaggct taactatact                                                  2000
//


  
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