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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ132761; SV 1; linear; genomic DNA; STD; PRO; 1362 BP.
XX
AC   AJ132761;
XX
DT   10-FEB-1999 (Rel. 58, Created)
DT   09-OCT-2000 (Rel. 65, Last updated, Version 3)
XX
DE   Shigella sonnei stxA and stxB genes
XX
KW   stxA gene; StxA protein; stxB gene; StxB protein.
XX
OS   Shigella sonnei
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Shigella.
XX
RN   [1]
RP   1-1362
RA   Beutin L.;
RT   ;
RL   Submitted (09-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Beutin L., Emerging Bacterial Pathogens, Robert Koch Institut, Nordufer 20,
RL   D-13353 Berlin, GERMANY.
XX
RN   [2]
RX   DOI; 10.1016/S0140-6736(99)00961-7
RX   PUBMED; 10232325.
RA   Beutin L., Strauch E., Fischer I.;
RT   "Isolation of Shigella sonnei lysogenic for a bacteriophage encoding gene
RT   for production of Shiga toxin";
RL   Lancet 353(9163):1498-1498(1999).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1362
FT                   /organism="Shigella sonnei"
FT                   /strain="CB7888"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:624"
FT   CDS             94..1041
FT                   /transl_table=11
FT                   /gene="stxA"
FT                   /product="StxA protein"
FT                   /function="cytotoxin"
FT                   /db_xref="GOA:Q779K4"
FT                   /db_xref="InterPro:IPR016331"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q779K4"
FT                   /protein_id="CAA10763.1"
FT                   /translation="MKIIIFRVLTFFFVIFSVNVVAKEFTLDFSTAKTYVDSLNVIRSA
FT                   IGTPLQTISSGGTSLLMIDSGTGDNLFAVDVRGIDPEEGRFNNLRLIVERNNLYVTGFV
FT                   NRTNNVFYRFADFSHVTFPGTTAVTLSGDSSYTTLQRVAGISRTGMQINRHSLTTSYLD
FT                   LMSHSGTSLTQSVARAMLRFVTVTAEALRFRQIQRGFRTTLDDLSGRSYVMTAEDVDLT
FT                   LNWGRLSSVLPDYHGQDSVRVGRISFGSINAILGSVALILNCHHHASRVARMASDEFPS
FT                   MCPADGRVRGITHNKILWDSSTLGAILMRRTISS"
FT   CDS             1051..1320
FT                   /transl_table=11
FT                   /gene="stxB"
FT                   /product="StxB protein"
FT                   /function="binding subunit"
FT                   /db_xref="GOA:Q779K3"
FT                   /db_xref="InterPro:IPR003189"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q779K3"
FT                   /protein_id="CAA10764.1"
FT                   /translation="MKKTLLIAASLSFFSASALATPDCVTGKVEYTKYNDDDTFTVKVG
FT                   DKELFTNRWNLQSLLLSAQITGMTVTIKTNACHNGGGFSEVIFR"
XX
SQ   Sequence 1362 BP; 374 A; 225 C; 336 G; 427 T; 0 other;
     gtttatccgg tgcgccgtaa aacgccgtcc ttcagggggt ggaggatgtc aagaatatag        60
     ttatcgtatg gtgctcaagg agtattgtgt aatatgaaaa taattatttt tagagtgcta       120
     acttttttct ttgttatctt ttcagttaat gtggttgcga aggaatttac cttagacttc       180
     tcgactgcaa agacgtatgt agattcgctg aatgtcattc gctctgcaat aggtactcca       240
     ttacagacta tttcatcagg aggtacgtct ttactgatga ttgatagtgg cacaggggat       300
     aatttgtttg cagttgatgt cagagggata gatccagagg aagggcggtt taataatcta       360
     cggcttattg ttgaacgaaa taatttatat gtgacaggat ttgttaacag gacaaataat       420
     gttttttatc gctttgctga tttttcacat gttacctttc caggtacaac agcggttaca       480
     ttgtctggtg acagtagcta taccacgtta cagcgtgttg cagggatcag tcgtacgggg       540
     atgcagataa atcgccattc gttgactact tcttatctgg atttaatgtc gcatagtgga       600
     acctcactga cgcagtctgt ggcaagagcg atgttacggt ttgttactgt gacagctgaa       660
     gctttacgtt ttcggcaaat acagagggga tttcgtacaa cactggatga tctcagtggg       720
     cgttcttatg taatgactgc tgaagatgtt gatcttacat tgaactgggg aaggttgagt       780
     agtgtcctgc ctgactatca tggacaagac tctgttcgtg taggaagaat ttcttttgga       840
     agcattaatg caattctggg aagcgtggca ttaatactga attgtcatca tcatgcatcg       900
     cgagttgcca gaatggcatc tgatgagttt ccttctatgt gtccggcaga tggaagagtc       960
     cgtgggatta cgcacaataa aatattgtgg gattcatcca ctctgggggc aattctgatg      1020
     cgcagaacta ttagcagttg agggggtaaa atgaaaaaaa cattattaat agctgcatcg      1080
     ctttcatttt tttcagcaag tgcgctggcg acgcctgatt gtgtaactgg aaaggtggag      1140
     tatacaaaat ataatgatga cgataccttt acagttaaag tgggtgataa agaattattt      1200
     accaacagat ggaatcttca gtctcttctt ctcagtgcgc aaattacggg gatgactgta      1260
     actattaaaa ctaatgcctg tcataatgga gggggattca gcgaagttat ttttcgttga      1320
     ctcagaatag ctcagtgaaa atagcaggcg gagattcata aa                         1362
//
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