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EBI DbfetchID AJ132325; SV 1; linear; genomic DNA; STD; PRO; 2434 BP. XX AC AJ132325; XX DT 25-JAN-1999 (Rel. 58, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Erwinia chrysanthemi pelC gene, strain 3937 XX KW pectate lyase; pelC gene. XX OS Erwinia chrysanthemi OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. XX RN [1] RP 1-2434 RA Hugouvieux-Cotte-Pattat N.; RT ; RL Submitted (22-JAN-1999) to the EMBL/GenBank/DDBJ databases. RL Hugouvieux-Cotte-Pattat N., Biochimie, UMR INSA-CNRS, INSA bat 406, 20 RL Avenue Einstein, Villeurbanne, 69100, FRANCE. XX FH Key Location/Qualifiers FH FT source 1..2434 FT /organism="Erwinia chrysanthemi" FT /strain="3937" FT /mol_type="genomic DNA" FT /db_xref="taxon:556" FT attenuator 437..455 FT /gene="pelC" FT /note="KdgR binding site" FT /experiment="experimental evidence, no additional details FT recorded" FT -35_signal 458..463 FT /gene="pelC" FT /experiment="experimental evidence, no additional details FT recorded" FT -10_signal 480..485 FT /gene="pelC" FT /experiment="experimental evidence, no additional details FT recorded" FT RBS 660..664 FT /gene="pelC" FT CDS 673..1797 FT /transl_table=11 FT /gene="pelC" FT /product="pectate lyase" FT /function="pectin degradation" FT /EC_number="4.2.2.2" FT /db_xref="GOA:Q59420" FT /db_xref="HSSP:1AIR" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/TrEMBL:Q59420" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAA10642.1" FT /translation="MKSFIAPIAAGLLLAFSQSSLAATGGYATTSGGNVTGAVSKTAAS FT MQDIIDIIDAAKVDSKGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDARGVEI FT KDFTKGITIIGANGSSANFGLWIVNSSDVVVRNMRIGYLPGGAQDGDMFRIDNSPNVWL FT DHNELFAANHECDGTKDGDTTFESAFDIKKGATYVTISYNNIHGVKKVGLAGFSSSDSA FT ERNITYHHNIYNDVNARLPLQRGGNVHAYNNLYTNITSSGLNVRQNGKALIENNWFENA FT VNPVTSRYDGSNFGTWVLKNNNITKPADFATYNITWTADTKAYVNADSWTSTGTYPAVT FT YSYSPVSAQCVKDKLASYAGVGKNLAELTSAACK" FT sig_peptide 673..739 FT /gene="pelC" FT mat_peptide 740..1794 FT /gene="pelC" FT /product="pectate lyase" FT /EC_number="4.2.2.2" XX SQ Sequence 2434 BP; 610 A; 738 C; 614 G; 472 T; 0 other; aagcttacgt caacgcggac agctggacct ccaccggcac tttcccgacg gtggcctaca 60 gctacagccc ggtgagcgca caatgcgtga aggacaatct ggctaactac gccggcgtgg 120 gcaagaacct ggcaacgctg accagcgcac gctgtaaata atccggcagc gaaggccggg 180 catgaaaagc agcccggctg acgccctatc accgagcggg ctacacgccc gtctttttct 240 tttcggtacg ttccacgcct tgtcaccatc agtccgatac ggaacgcgac ggacaaggct 300 gagtgcctta taccgatttc agccaatttg ataattaatc atcttttaat tatcaagcgt 360 tatgactaag tggtcagaac tccggccact aaaagtgacg cctgtcaaaa tttgtaaaaa 420 cataatcacc actaataatg aaattacgtt tcaactattg aaacgtctcc tttttgagct 480 aaaactgagc gcgggttgat tcgtgcgatt cggttttact tatctatccc ccaacgcatt 540 cgagtggcag gaaagcggtt aacgcacctg cgacgtggag cgatgggatc ccctgccgca 600 ccaacccaca accaagggca tgtggaacga taaatgccca tatcacattt ttcaaaaaca 660 ggaatattac tcatgaaatc attcattgca ccgattgccg ccggtctgct gctggctttt 720 agtcaatcca gtctggctgc gactggcggt tacgccacca cttccggtgg taacgtgaca 780 ggggctgtca gcaaaaccgc agcatccatg caggacatta tcgatatcat cgacgccgcc 840 aaagtcgatt ccaaaggtaa gaaggtgaaa ggcggcgcgt acccgctggt catcacctat 900 accggtaacg aagacagctt gatcaacgcc gctgccgcca acatctgcgg ccagtggagc 960 aaagacgccc gcggtgtgga aatcaaagac ttcaccaaag gcatcaccat tatcggcgcc 1020 aacggttctt ccgctaactt cggtctttgg atcgtgaact cctccgacgt ggtagtgcgc 1080 aacatgcgta tcggctacct gccgggcggc gcccaggatg gcgatatgtt ccgtatcgac 1140 aactcgccga acgtctggct ggaccataac gaactgtttg ccgccaacca cgagtgtgat 1200 ggcaccaaag acggcgacac cacgttcgaa tccgcctttg acatcaagaa gggcgcaact 1260 tacgtcacca tttcctacaa caacatccac ggcgtgaaga aagtcggtct ggcagggttc 1320 agctcctctg acagcgccga acgcaacatc acttaccacc acaacatcta caacgacgtc 1380 aacgcccgcc tgccgttgca gcgcggcggc aacgtacacg cctacaacaa cctgtacacc 1440 aacatcacca gctctggtct gaacgtacgt cagaacggca aggcgctgat cgaaaacaac 1500 tggttcgaaa acgcggtcaa cccggtgacg tctcgttacg acggcagcaa tttcggtacc 1560 tgggtgctga aaaacaacaa catcaccaaa ccggctgatt tcgccaccta caacatcacc 1620 tggacggcgg ataccaaggc ttacgtgaac gcagacagct ggacttccac cggcacttac 1680 ccggctgtga cctacagcta cagcccggtc agcgcgcagt gcgtgaagga caaactggct 1740 agctacgccg gcgtcggtaa aaacctggcc gagctgacca gcgctgcctg taaataatcg 1800 gttctcatca gccacgctga tgcctggaac ccccatccgt ccggcaagcc cgggcgatgg 1860 cggaaccgac tatagagcgg gagagcgaca ttcgctcgcc cgctttttta tctagccgtg 1920 tcccaccgtg acaggacacg atccggcata tggagcaagc cattatgaaa catacccttc 1980 tgtttgcttt actgttcagc accagcgtcc tgaccgttca ggccgccagc accgccgccc 2040 ccgacctgaa aggattcgga accgagacgg tcgccggcag cggcggaaaa atcatccgcg 2100 tgactacgct ggactccggc ggcgccggtt cgctgcgtga agcgctggcc accaaaggcc 2160 cgcgtattat cgtgtttgaa gtcggcggta ttatcgacct ggacgaaaaa gatatccggc 2220 tcgccgagcc ctacgtcact atcgccggcc agaccgcgcc atcaccgggc atcacgctgg 2280 tcaagggcgg catgatgatc accacccatg acgtactggt gcaacatatc cgtttccgca 2340 tcggcgataa cggccacgcc aagaagagcg gctttgaaaa agacgtatcg ctctacggac 2400 caaacgccta caacgtggtg gtggaccact gcag 2434 // |
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