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EBI DbfetchID AJ132101; SV 1; linear; genomic DNA; STD; PRO; 2018 BP. XX AC AJ132101; XX DT 08-JAN-1999 (Rel. 58, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Erwinia chrysanthemi (strain 3937) pelD gene XX KW pectate lyase; pelD gene. XX OS Erwinia chrysanthemi OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Dickeya. XX RN [1] RP 1-2018 RA Hugouvieux-Cotte-Pattat N.; RT ; RL Submitted (05-JAN-1999) to the EMBL/GenBank/DDBJ databases. RL Hugouvieux-Cotte-Pattat N., Biochimie, Lab Genetique Moleculaire des RL Microorganismes INSA-CNRS, bat 406 INSA, 20 Avenue Einstein, Villeurbanne, RL 69100, FRANCE. XX RN [2] RA Hugouvieux-Cotte-Pattat N.; RT ; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..2018 FT /organism="Erwinia chrysanthemi" FT /strain="3937" FT /mol_type="genomic DNA" FT /db_xref="taxon:556" FT -35_signal 565..570 FT /gene="pelD" FT /experiment="experimental evidence, no additional details FT recorded" FT -10_signal 587..592 FT /gene="pelD" FT /experiment="experimental evidence, no additional details FT recorded" FT protein_bind 608..626 FT /bound_moiety="KdgR repressor" FT /experiment="experimental evidence, no additional details FT recorded" FT RBS 678..682 FT /gene="pelD" FT CDS 691..1869 FT /transl_table=11 FT /gene="pelD" FT /product="pectate lyase" FT /function="pectin dagradation" FT /EC_number="4.2.2.2" FT /db_xref="GOA:Q9Z4J4" FT /db_xref="HSSP:1JRG" FT /db_xref="InterPro:IPR002022" FT /db_xref="InterPro:IPR011050" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/TrEMBL:Q9Z4J4" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAA10570.1" FT /translation="MNNTRVSSVGTKSLLAAIIATSMMTWSVNAATLQTTKATEAASTG FT WATQGGGTTGGAKAASAKIYAVKNISEFKAALNGTDTDPKIIQVTGAIDISGGKAYTSF FT DDQKARSQISVPSNTTIIGIGSNGKFTNGSLVIKGVSNVILRNLYIETPVDVAPHYEEG FT DGWNAEWDAAVIDNSTRVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYV FT TISSSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNN FT VYLGDVKNSVYPYLYSFGLGTSGSILSESNSFTLSNLKSIDGKNPECSIVKQFNSKVFS FT DNGSLVNGSSTTKLDTCGLTAYKPTLPYKYSAQTMTSSLASSINSNAGYGKL" FT sig_peptide 691..753 FT /gene="pelD" FT mat_peptide 754..1866 FT /gene="pelD" FT /product="pectate lyase" XX SQ Sequence 2018 BP; 599 A; 551 C; 435 G; 433 T; 0 other; agatcttctc tgataaaggc tcgatcatca acggcgcttc gtacaatctg aatggttgcg 60 gctttggctt cagcgcatac agcgccaaga tcccgtacaa atactcagcc caaaccatca 120 ccaccagcct ggcaaacagc atcagcagca acgcgggcta cggtaaactg taatttcccg 180 cccagcgtaa aggccacttg caaaagtggc ctttattttc ccatattccc accactcgta 240 ttaccccgat gttctccgaa gcgccactca atacggttca ggttaatccg gccttgccac 300 aggcgttcat caagaaatcg accggtttcc ccatcaaatg cagggactag caggaattag 360 taagagacac agattaataa aattctattt aataaaaatc gaatcaattg ttaactgttt 420 gggttatttc agataaaaac gcttatacat atagctgaat ttaaaagaaa aattaattca 480 acattcataa ctaaaagtta ccggtcacga tcacacttta gataaaatta attagcctca 540 taaaaaaaac gagattttga tcacaaaata aacaatcgaa aacgcttaaa aatccgcctt 600 gccaaaggac aaaatggcgt ttcatttttt tcacaaacac ttttcagtca acaaaattgg 660 attagcgcag atagcgcaag gaaccagtct atgaacaaca cacgagtgtc ttccgtaggt 720 accaaaagct tgctggcagc catcatcgct acatcgatga tgacctggtc agtcaatgca 780 gccacgctgc aaaccaccaa ggcgacagaa gcagcgtcaa ctggctgggc aacgcagggc 840 ggcggcacca ccggcggcgc caaagcagcc tcagccaaaa tctatgcagt aaaaaacatc 900 agcgaattta aagcagcact gaatggcacc gacaccgatc cgaaaatcat tcaggtgacc 960 ggcgctatcg atatcagcgg cggcaaagcc tacaccagct ttgacgatca gaaagcccgc 1020 agccagatca gcgttccgtc caacaccacc atcatcggta ttggcagcaa tggcaaattc 1080 accaacggct ctctggtcat caaaggcgtg agtaacgtta tcctgcgtaa cctgtatatc 1140 gaaacgccgg tggatgtagc accgcattac gaggaagggg atggctggaa cgccgagtgg 1200 gatgcggcgg tgatcgacaa ttccacccgc gtttgggttg accatgtcac catcagcgac 1260 ggcagcttca ccgatgacaa atacaccacc aaagacggcg aaaaatatgt gcagcacgac 1320 ggcgcgctgg atatcaagaa agggtccgac tacgtcacca tttccagcag ccgcttcgaa 1380 ctgcatgaca aaaccatcct gatcggccac agcgacagca acggctcaca ggactccggc 1440 aaactgcgcg ttaccttcca caacaacgtg tttgaccgtg taaccgaacg taccccgcgc 1500 gtacgctttg gtagcatcca cgcatataac aacgtgtatc tgggcgacgt gaaaaacagc 1560 gtctatccgt atctgtacag cttcggtctt ggcaccagcg gcagcatcct gtcggagtcc 1620 aactccttca cgctctccaa cctgaagagc attgatggca aaaatccaga atgcagcatc 1680 gtgaagcaat tcaacagcaa ggtattctcc gataacggct cactggttaa cggctcgtca 1740 accactaagc tggacacttg cggcctgacg gcttacaaac cgactctgcc gtacaaatat 1800 tcggctcaga ccatgacaag tagcctggct agcagcatca atagcaatgc aggatacggc 1860 aaactgtaat tcctctgcca gtaaatcgcg gccacttgaa aaagtggccg ctttttgcat 1920 caatcgcagg taaaagaggt catcatcatg ctcacaacta cctggaatcg cgcctttttt 1980 ctcggttccc tgctttgtct gccgatatct tttgcgca 2018 // |
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