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EBI Dbfetch

ID   AJ007788; SV 1; linear; genomic DNA; STD; PRO; 6006 BP.
XX
AC   AJ007788;
XX
DT   06-APR-1999 (Rel. 59, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Bacillus cereus ilvD (partial), ilvA, capA, bc299d, bc299e and bc299f genes
DE   (partial)
XX
KW   bc299d gene; bc299e gene; bc299f gene; capA gene;
KW   dihydroxy-acid dehydratase; ilvA gene; ilvD gene; threonine dehydratase.
XX
OS   Bacillus cereus
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus;
OC   Bacillus cereus group.
XX
RN   [1]
RP   1-6006
RA   Hegna I.K.;
RT   ;
RL   Submitted (09-JUL-1998) to the EMBL/GenBank/DDBJ databases.
RL   Hegna I.K., Biotechnology Centre of Oslo, University of Oslo, Institute of
RL   Pharmacy, Department of Microbiology, P.O.Box 1125 Blindern, N-0316 Oslo,
RL   NORWAY.
XX
RN   [3]
RX   PUBMED; 10217496.
RA   Okstad O.A., Hegna I., Lindbaeck T., Rishovd A.L., Kolsto A.B.;
RT   "Genome organisation is not conserved between Bacillus cereus and Bacillus
RT   subtilis.";
RL   Microbiology (Reading, Engl.) 145:621-631(1999).
XX
DR   StrainInfo; 95588; ATCC 10987.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..6006
FT                   /organism="Bacillus cereus"
FT                   /strain="ATCC 10987"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1396"
FT   CDS             <1..1075
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="ilvD"
FT                   /product="dihydroxy-acid dehydratase"
FT                   /EC_number="4.2.1.9"
FT                   /db_xref="GOA:Q9XBI3"
FT                   /db_xref="InterPro:IPR000581"
FT                   /db_xref="InterPro:IPR004404"
FT                   /db_xref="InterPro:IPR020558"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9XBI3"
FT                   /protein_id="CAB40615.1"
FT                   /translation="MNCLCEVLGLALPGNGSILAIDPRREELIKQAAEKLKILIERDIK
FT                   PRDIVTEEAIDDAFALDMAMGGSTNTVLHTLALAHEAGLDYDMSRIDAVSRRVPHLCKV
FT                   SPASNWHMEDIDRAGGISAILKEMSRKEGVLHLDRITATGQTLRENIAHAEIKDKEVIH
FT                   SLENPHSEEGGLRILKGNLAKDGAVIKSGATEVKRFEGPCVIFNSQDEALAGIMLGKVK
FT                   KGDVVVIRYEGPRGGPGMPEMLAPTSAIAGMGLGADVALLTDGRFSGASRGISVGHISP
FT                   EAAAGGTIALLEQGDIVCIDVEERLLEVRVSDEELDKRKKEWKRPEPKVKTGWLGRYAQ
FT                   MVTSANTGAVLKVPNFD"
FT   RBS             1093..1099
FT                   /gene="ilvA"
FT   CDS             1107..2369
FT                   /transl_table=11
FT                   /gene="ilvA"
FT                   /product="threonine dehydratase"
FT                   /EC_number="4.2.1.16"
FT                   /db_xref="GOA:Q9XBI2"
FT                   /db_xref="HSSP:1TDJ"
FT                   /db_xref="InterPro:IPR001721"
FT                   /db_xref="InterPro:IPR001926"
FT                   /db_xref="InterPro:IPR011820"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XBI2"
FT                   /protein_id="CAB40616.1"
FT                   /translation="MVQKVKERVKIEDILMAHNCMKDIVIKTPLQRDTVLSEKYDCDVY
FT                   VKREDLQLIRSFKIRGAYNLIQSLPKEQLQNGVVCASAGNHAQGVAFTCNLLKIPSKIF
FT                   MPTTTPKQKVSQVQFFGGDFAEIVLVGDTFDSSFQEAQRYCEENRMTFVHPFDDPYVVA
FT                   GQGTVAVEIMHDMEKPVDYIFTAIGGGGLASGVGTYVKGVSPATKVIGVEPMGAASMKE
FT                   AFLQNDNVALEKIDSFVDGAAVKKVGKLTFETCKDVIDDIVLVPEGKVCTTILELYKKN
FT                   AIVAEPAGALSIAALDLYKDEIQGKTVVCTLSGGNNDIDRMQEMKERSLIYEGLKHYFI
FT                   IEFPQRSGALREFLDKGLGPEDDITRFEYIKKHNKENGPALVGVELKHKEDYAQLITRF
FT                   KENNIQFMELNKNPVLFDLLI"
FT   terminator      2402..2444
FT                   /gene="ilvA"
FT   repeat_region   2689..2710
FT                   /gene="capA"
FT                   /rpt_type=INVERTED
FT   CDS             complement(2729..3832)
FT                   /transl_table=11
FT                   /gene="capA"
FT                   /note="related sequence M24150"
FT                   /db_xref="InterPro:IPR019079"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XBI1"
FT                   /protein_id="CAB40617.1"
FT                   /translation="MKTLLKRFLLIAFCITPIVVLINHSFTSKAKDKPDFQNKSSKTAS
FT                   TSEKKIENPEITLTFSGDTMFDWQLRPVIEKNGADYPFQHVKEEITKADISFVNLESAF
FT                   TTREKKAPGQLFWIKSDPSTLQAIKNTGYDIVNIGNNHTLDYGQDGLLDTISHVEKLKF
FT                   PYIGAGKNAKDAYTAREMTVKGKKFKFLSFVRFMPDTNWVAGDNKPGVANGYDLNLVTK
FT                   TIKEQKKDADYLIVYMHWGVEKSNRPVEYQKQYVPKMVEAGADAIVGSHPHWLQGFEYY
FT                   NKVPIAYSLGNFLFPSYVNGKSAETGVLTLTFKGKDVQMSFNPYIIRNNQVSPVNEEEK
FT                   RKALQYLQTISTDVDIDDTGNIKNKRN"
FT   RBS             complement(3838..3844)
FT                   /gene="capA"
FT   RBS             4035..4040
FT                   /gene="bc299d"
FT                   /note="orf4"
FT   CDS             4045..4761
FT                   /transl_table=11
FT                   /gene="bc299d"
FT                   /product="hypothetical protein"
FT                   /note="orf4"
FT                   /note="related sequences ydfK gene, AB001488l and ydgA
FT                   gene, D90800"
FT                   /db_xref="InterPro:IPR007563"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XBI0"
FT                   /protein_id="CAB40618.1"
FT                   /translation="MVILGAVVNGICIICGTLLGKLFSRIPESMKGTIMHAIGLAVTVL
FT                   GLQMALKSENFLVVILSLVIGTVIGEWLQLEGKLKQLGDWLENKVGSKGKGSISEGFVT
FT                   ATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPVILY
FT                   EGGIAVFATQINSLVPKELMNQFIVEMTATGGIMIAAIGLNLLSIIKIKVANLLPGILI
FT                   VGIIVSLIYGYGLIVK"
FT   RBS             4760..4765
FT                   /gene="bc299e"
FT                   /note="orf5"
FT   CDS             4768..5631
FT                   /transl_table=11
FT                   /gene="bc299e"
FT                   /product="hypothetical protein"
FT                   /note="orf5"
FT                   /db_xref="GOA:Q9XBH9"
FT                   /db_xref="InterPro:IPR000182"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XBH9"
FT                   /protein_id="CAB40619.1"
FT                   /translation="MKVHMEEFQFTKRVHNILKIAAEEGESNIIQPVHLFIGMCKEGTG
FT                   VCSELYMYLFRNVGTDFLEKLSLRKQDDLTDQEYEKIGQYKVSYKVLEILQIAKKRMER
FT                   FQQVLMNEGHVIYALFRADTFIENPQIQKEILRIVEEPRDLAVDLKCFVPAYTHLTCHV
FT                   RKANSSDFGKLVSFVSEEFGERWLHSIEYGFRTYKENVPIYIAEQKEVIVGFACYDVVR
FT                   GKKGLFGPMGTAKQNRVKSVGKQLLHCSLHSMKQDGYEYAIIGQAGPVEFYERCCNARL
FT                   IPIMDY"
FT   terminator      5630..5657
FT                   /gene="bc299e"
FT                   /note="orf5"
FT   RBS             5787..5792
FT                   /gene="bc299f"
FT                   /note="orf6"
FT   CDS             5800..>6006
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="bc299f"
FT                   /function="hypothetical protein"
FT                   /note="orf6"
FT                   /note="related sequences yceE gene, AB000617 and msyB gene,
FT                   U64313"
FT                   /db_xref="InterPro:IPR016196"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XBH8"
FT                   /protein_id="CAB40620.1"
FT                   /translation="MASWKRNLMICWLGCFTTAAGMSLVIPFLSFYIEELGVTGTSSIA
FT                   QWSGLAFGVTFLMGAIVSPIWGKL"
XX
SQ   Sequence 6006 BP; 1961 A; 829 C; 1313 G; 1903 T; 0 other;
     tatgaattgt ttatgtgaag tattaggttt agctcttcct ggtaacggta gtattttagc        60
     tattgatcca agacgcgaag aattaattaa acaagcagca gagaaattaa agattttaat       120
     tgaaagagat attaaaccga gagacatcgt aacagaagaa gcaattgatg atgcgttcgc       180
     gcttgatatg gcgatgggcg gttcaacaaa tacagtgtta catacattag cactcgcaca       240
     tgaggcagga ctagattatg atatgagccg tattgatgcc gtttcaaggc gtgtaccaca       300
     tttatgtaaa gtaagccctg cttccaattg gcatatggaa gatattgatc gtgcaggcgg       360
     gattagtgca attttgaaag agatgagccg aaaagaagga gtacttcatt tagatcgtat       420
     tactgctacg gggcaaacat taagagaaaa tattgctcat gcagagatta aagataagga       480
     agttattcat tctcttgaaa accctcatag tgaagaaggg ggattacgta tattaaaagg       540
     aaacctcgcg aaagatggag cagttattaa aagcggagca actgaagtaa aacgatttga       600
     aggaccatgc gttattttta attcacaaga tgaggctctt gcgggtatta tgcttgggaa       660
     agtgaagaaa ggagatgtag ttgttattcg ttatgaagga ccaagaggcg gtcctggtat       720
     gccggaaatg ttagcaccaa cgtcagcaat tgctggcatg ggattaggtg cagatgttgc       780
     gctattaacg gatggtcgtt tctctggtgc ttcacgtggt atttcggtag ggcatatttc       840
     accagaagca gctgcgggcg ggacgattgc acttcttgaa caaggggata tcgtttgtat       900
     cgatgttgag gaaaggttgt tagaagtaag agtgagtgac gaagaattag ataagcgtaa       960
     aaaagaatgg aaacgaccag aaccgaaagt gaaaacgggc tggcttgggc gttatgcaca      1020
     aatggtaaca tcggcgaata caggtgcagt cttaaaagtc ccgaattttg attgagctaa      1080
     ttaaaaagag ataaggatga tatgaaatgg tgcaaaaggt aaaggagaga gtgaaaattg      1140
     aagatatctt aatggctcat aattgcatga aagatatcgt tattaaaaca ccgttacaac      1200
     gtgatacagt tttatctgag aaatatgatt gtgacgttta tgtaaaacga gaagatttac      1260
     aattgattcg ctctttcaaa attcgtggtg cgtacaattt aattcaaagc ttaccgaaag      1320
     aacaattaca aaacggtgtt gtttgcgcaa gcgctggtaa tcacgcacaa ggggtagctt      1380
     ttacgtgtaa tttattgaag attccgtcaa aaatctttat gccaacaacg acgccgaaac      1440
     aaaaagtatc gcaagtacaa tttttcggtg gtgatttcgc agagattgta ttagttggtg      1500
     atacattcga tagctctttt caagaagcac agcgttattg tgaagaaaat agaatgacgt      1560
     ttgttcatcc atttgatgat ccgtatgtgg ttgctggtca aggaacagtg gcagttgaaa      1620
     ttatgcatga tatggagaaa ccagtggatt atatctttac agcaattggc ggcggtggat      1680
     tagcatcagg tgttggtaca tatgtgaaag gtgttagtcc tgctacaaag gttattgggg      1740
     tagagccaat gggagcagca tctatgaaag aggcttttct tcaaaacgat aatgtcgcat      1800
     tggagaaaat agatagtttt gttgatggag cagcagttaa aaaggtagga aagttaacat      1860
     ttgaaacgtg taaagatgta attgatgaca tcgttttagt accagaagga aaggtttgta      1920
     cgacgatttt agaactgtat aagaaaaatg cgattgtagc agagcctgct ggtgcacttt      1980
     ctattgccgc acttgatcta tacaaggatg aaattcaagg taaaacagtt gtatgcacat      2040
     taagcggtgg aaataacgat attgatagaa tgcaagagat gaaagaacgt tctctcattt      2100
     acgaaggatt aaaacattat ttcatcattg aattcccgca gcgttcaggt gcgctaagag      2160
     aatttcttga taaaggatta ggaccagaag atgatattac gcgctttgag tatattaaga      2220
     aacataataa ggaaaatggt ccagcgttag tcggagtaga gttaaaacat aaagaagatt      2280
     acgcgcagtt aattacccgt tttaaagaaa ataacattca atttatggag cttaataaaa      2340
     atcctgtttt gtttgattta cttatttaat agaaagaaag agttagcatc caaataaaaa      2400
     agatagatac aagcaatgga aatgctgctt gttctatctt ttttatagtt aaactatata      2460
     ctttccatat tcaagaagga taaagctagt taaccaaaag agtatcgcaa tgcgaataat      2520
     tacatacata gtaaattcaa aggtagtaag ttttcgctcg cgttttattt tttttagaag      2580
     tctaacagag aaaaatgaac ataaaagtag aacggctata gatattttat aaatgttttc      2640
     taacaaactt acattttcta ataaatcttt cagcatgttc atcacctatt ctgtaaagta      2700
     tgttacagag aaatagatct tgcgttgtct agtttcgttt gttttttatg ttccctgtat      2760
     catcaatgtc tacatcagtt gaaattgttt gtaagtattg tagagctttt ctcttttctt      2820
     cctcatttac aggggaaact tgattgttac ggatgatata aggattgaat gacatttgga      2880
     catcctttcc tttaaaagtt aaagttaata cgccagtttc ggcacttttt ccgttcacat      2940
     aacttgggaa taaaaagtta cctaatgaat aagcgatagg aactttatta taatactcaa      3000
     atccttgtaa ccaatgcggg tgactcccga caatcgcgtc agcccctgct tcaaccattt      3060
     taggtacata ttgtttttgg tattctacag gacgatttga tttctcaacg ccccaatgca      3120
     tatagacgat taaatagtct gcgtctttct tttgttcttt aattgttttt gttacgagat      3180
     ttaaatcata cccattcgca acaccaggtt tattgtcacc agctacccaa ttcgtatcag      3240
     gcataaatcg aacgaaggaa agaaatttga atttttttcc ttttacagtc atttctcgtg      3300
     ctgtatatgc atcttttgca ttttttccgg ctccgatata agggaacttt aatttttcta      3360
     catgagagat tgtatctaat aatccatctt gcccataatc aagtgtatgg ttattcccga      3420
     tatttacgat gtcataaccg gtgtttttta tagcttgaag cgtggatgga tcacttttaa      3480
     tccaaaacag ttgtcctgga gctttctttt ctctcgttgt aaatgctgac tctaaattaa      3540
     cgaaagaaat atcagctttt gttatttctt cttttacatg ttggaatgga taatcagccc      3600
     cgtttttttc gattaccgga cgtaattgcc aatcgaacat tgtatcacca gaaaaggtga      3660
     gggtaatttc cgggttttct attttcttct cgctcgttga agcagttttg ctagatttgt      3720
     tttggaaatc gggtttgtct ttcgcttttg aagtaaaaga gtggttaatt aatacaacaa      3780
     ttggcgtaat gcaaaaggct attaacaaaa atcgttttag taaagttttc ataaatacct      3840
     tcccttttga gtttatcccg caattcaatt agcaatgagt ctacaaaaaa gtaattggtt      3900
     tatgtacaga tataaaaaat gcggtttatg cagtggaaaa catttgttaa tattctcaat      3960
     attaagttaa catatagata acctgtaaat caatgaataa accaaaatat agaaataaag      4020
     aatttgaagg gtgaagaatg agaaatggtt atattaggag cagttgtaaa tggaatttgc      4080
     attatatgtg gtactttact aggtaaatta tttagtagaa ttccagaaag tatgaaggga      4140
     acaattatgc atgcaatcgg tttagcggtt actgtacttg gacttcaaat ggcattgaaa      4200
     agtgaaaatt ttcttgttgt catactaagt ttagtaattg gtaccgttat cggggaatgg      4260
     ttacaattag agggaaagtt aaaacagtta ggagattggc tagaaaataa agttggatcg      4320
     aaagggaaag ggagtatatc agaaggtttt gtaacagcta ctttaatatt tgcaattggt      4380
     gcgatgggta tacttggtgc actcgacagt gggattcgcg gaaatcacga tattttattt      4440
     acaaaggcaa ttatcgatgg atttatttct attatattaa cgacaactct agggattggc      4500
     gtagtatttt cagcgattcc agtaatttta tatgaaggtg gcatcgcagt ttttgcaaca      4560
     caaattaata gtttggtccc gaaagaatta atgaatcaat ttatagtaga aatgacagct      4620
     acaggtggta ttatgatagc cgctatcgga ttgaacttac ttagtattat taaaattaaa      4680
     gtggcaaatt tactgccagg tatattgata gttggaatca ttgtttcact tatttatggt      4740
     tacggtttaa tagtaaagta gtaggggatg aaggtacata tggaggaatt tcaatttaca      4800
     aaacgtgttc ataacatatt gaagattgca gcagaagagg gagaaagtaa tatcattcaa      4860
     ccagttcatt tatttattgg catgtgtaaa gaaggtactg gcgtatgcag cgagttgtat      4920
     atgtatttgt ttcgtaacgt ggggacggat tttttagaaa aactttcatt acgaaaacaa      4980
     gacgatttaa cggatcaaga gtatgaaaaa atagggcaat ataaggtatc ttataaggtg      5040
     ctagaaattt tacaaatagc gaagaaacgt atggaacgtt ttcagcaagt attaatgaac      5100
     gaaggacatg ttatatatgc actctttcgc gcggatacgt ttattgaaaa tccacaaata      5160
     caaaaagaga tattacgtat tgtagaagag ccaagagatt tagcggttga tttaaaatgt      5220
     tttgttcctg cttatactca tttaacttgt catgttagaa aggctaactc ttctgatttt      5280
     gggaaattag taagttttgt tagtgaggaa tttggtgaac gttggttaca ttcgatagag      5340
     tacggatttc gtacatataa agaaaatgta cctatttata tagcagaaca aaaagaagtg      5400
     atagtaggtt tcgcttgtta tgacgtagtg agaggaaaga aaggattgtt tggtccaatg      5460
     ggcacggcga aacaaaatcg tgtgaaaagt gtagggaagc aattgttaca ttgtagtctg      5520
     catagtatga agcaagatgg atatgaatat gcaattattg gacaagcagg tccggtagag      5580
     ttttatgaga gatgttgtaa tgcgcgttta ataccaatca tggattatta accaacttca      5640
     tttaggtgga gttggtttta ttatgaaaat aatgtagaga tgtagtgatt cttattagaa      5700
     aatagcgggt tttgtagtaa attttacata taaagcaaat tactaaactt tttacaagaa      5760
     agggtgtaga atgggtatct aaagaaagaa ggtgtgaaaa tggccagctg gaaacgaaat      5820
     ttaatgattt gttggctagg ttgttttacc actgcagccg gtatgagttt agtaattcct      5880
     tttttatctt tttatattga ggaattaggt gtgactggca cttctagtat tgcacagtgg      5940
     tcgggacttg catttggtgt aacattttta atgggtgcga tcgtatcacc aatatgggga      6000
     aagctt                                                                 6006
//


  
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