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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ006780; SV 1; linear; mRNA; STD; PLN; 1516 BP.
XX
AC   AJ006780;
XX
DT   07-JAN-1999 (Rel. 58, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Daucus carota mRNA for carrot chalcone synthase 2
XX
KW   carrot chalcone synthase 2; CHS2 gene; naringenin-chalcone synthase.
XX
OS   Daucus carota (carrot)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae;
OC   Daucus.
XX
RN   [1]
RP   1-1516
RA   Hirner A.A.;
RT   ;
RL   Submitted (09-JUN-1998) to the EMBL/GenBank/DDBJ databases.
RL   Plant Physiology, University of Tuebingen, Auf der Morgenstelle 1,
RL   Tuebingen 72076, Germany.
XX
RN   [2]
RA   Hirner A.A., Seitz H.U.;
RT   "Cloning of two different chalcone synthase isoforms from Daucus carota L.
RT   and their differential expression in organs from european wild carrot and
RT   in UV-A irradiated cell cultures";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1516
FT                   /organism="Daucus carota"
FT                   /mol_type="mRNA"
FT                   /cell_line="anthocyanin accumulating (DCb) cells"
FT                   /cell_line="none accumulating (DCs) cells"
FT                   /db_xref="taxon:4039"
FT   CDS             73..1266
FT                   /gene="chs2"
FT                   /product="carrot chalcone synthase 2"
FT                   /product="naringenin-chalcone synthase"
FT                   /db_xref="GOA:Q9ZS40"
FT                   /db_xref="InterPro:IPR001099"
FT                   /db_xref="InterPro:IPR011141"
FT                   /db_xref="InterPro:IPR012328"
FT                   /db_xref="InterPro:IPR016038"
FT                   /db_xref="InterPro:IPR016039"
FT                   /db_xref="InterPro:IPR018088"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9ZS40"
FT                   /protein_id="CAA07245.1"
FT                   /translation="MANHNAEIEEIRKRQRAQGPANILAIGTATPSNCVYQADYPDYYF
FT                   RITNSEHMSDLKLKFKRMCEKSMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVV
FT                   EVPRLGKEAAAKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMM
FT                   YQQGCFAGGTVLRLAKDLAENNTGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDG
FT                   AAAVIVGSDPDLSVERPLFQLISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISK
FT                   NIEKSLKEAFGPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGN
FT                   MSSACVLFILDEMRKKSIEEGKATTGDGLDWGVLFGFGPGLTVETVVLHSVPATITH"
XX
SQ   Sequence 1516 BP; 366 A; 387 C; 386 G; 377 T; 0 other;
     gaaacctaac aacacaaatc atcctcagcg atctatcttc ttaccggttt agagagatcg        60
     ggattgttga gaatggcgaa ccataatgcg gaaattgagg agatcaggaa aaggcagagg       120
     gctcagggtc cggcgaatat tctagctatc ggcaccgcca cgccttccaa ctgcgtctac       180
     caggctgatt atcctgatta ctattttcgg atcaccaatt ccgagcatat gagcgatctc       240
     aaactcaaat tcaagcgaat gtgtgaaaaa tctatgataa gaaagcgtta catgcacata       300
     acagaagaat atctaaaaga aaaccctaat gtgtgcgcct acgaggcgcc gtctctggac       360
     gcgcgccagg acctggtggt ggtggaggtg ccgaggctag gtaaagaagc tgcagccaaa       420
     gcgatcaaag agtggggcca ccccaaatcc aagatcactc acctcatttt ctgcaccact       480
     tctggtgtag acatgcccgg ggcagactac cagctgacca agctcctcgg gctccgcccc       540
     tccgtgaagc gcttcatgat gtatcagcag ggctgcttcg ccggcggcac ggtgctccgt       600
     ctcgccaagg acctggccga gaacaatacc ggcgcgcgag tcctcgtcgt ttgctccgag       660
     atcaccgccg tcactttccg cggcccttct gattcccacc tggactcttt agttggccag       720
     gcgctgttcg gtgacggcgc ggcggccgtc attgtcgggt cggatccgga tctgtccgtg       780
     gagcgcccgc tcttccagct catctccgcg gcccagacga ttctacccga ctccgacggg       840
     gccatcgacg ggcatctccg tgaagtgggg ctcaccttcc atctcctcaa agacgtcccc       900
     ggcttgatct ccaagaacat agagaagtcg ttgaaggaag cgttcgggcc tatcggcata       960
     tcggactgga actccttgtt ctggatagcc catccgggcg gcccggctat cttggaccag      1020
     gtagagctca agttgggcct gaaagaagag aaaatgcggg cgacccgaca ggtgttgagt      1080
     gattatggga acatgtcaag cgcatgtgtg ctctttattc ttgacgaaat gaggaagaag      1140
     tccattgaag aagggaaagc caccactgga gatgggttgg actggggcgt tcttttcggg      1200
     ttcgggccgg gtcttactgt cgaaaccgtt gtgttgcata gcgtacccgc gactattact      1260
     cactgaagtt gcttcatatg atttgtgttg catatacata ctatatggta cgtgtttgtt      1320
     attttgttgc ttcagctctg cgtgctcatg catctcgtgt taagtttacc ctgcttttca      1380
     aatatgtatt gtcggttgtt caataaagat cgatattctt ttcctcgctt gtaacgtatt      1440
     tacaaaattt catatgtatt ccttaaattc ctctttaatg atataaacct cgtcgattaa      1500
     aaaaaaaaaa aaaaaa                                                      1516
//
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