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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AJ006646; SV 2; linear; genomic DNA; STD; PRO; 1219 BP.
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AC   AJ006646;
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DT   05-JUN-1998 (Rel. 56, Created)
DT   28-JAN-2009 (Rel. 99, Last updated, Version 9)
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DE   Paenibacillus barcinonensis xynB gene for xylanase B, type strain BP-23T
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KW   .
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OS   Paenibacillus barcinonensis
OC   Bacteria; Firmicutes; Bacillales; Paenibacillaceae; Paenibacillus.
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RN   [1]
RP   1-1219
RA   Pastor F.I.J.;
RT   ;
RL   Submitted (02-JUN-1998) to the EMBL/GenBank/DDBJ databases.
RL   Pastor F.I.J., Departament de Microbiologia, Universitat de Barcelona,
RL   Avgda., Diagonal 645, 08028 Barcelona, SPAIN.
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RN   [2]
RP   1-1219
RA   Pastor F.I.J.;
RT   ;
RL   Submitted (19-DEC-2000) to the EMBL/GenBank/DDBJ databases.
RL   Pastor F.I.J., Departament de Microbiologia, Universitat de Barcelona,
RL   Avgda., Diagonal 645, 08028 Barcelona, SPAIN.
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RN   [3]
RX   DOI; 10.1099/ijs.0.63383-0
RX   PUBMED; 15774688.
RA   Sanchez M.M., Fritze D., Blanco A., Sproeer C., Tindall B., Schumann P.,
RA   Kroppenstedt R.M., Diaz P., Pastor J.I.V.;
RT   "Paenibacillus barcinonensis sp. nov., a xylanase-producing bacterium
RT   isolated from a rice field in the Ebro River delta";
RL   Int. J. Syst. Evol. Microbiol. 55(Pt 2):935-939(2005).
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FH   Key             Location/Qualifiers
FH
FT   source          1..1219
FT                   /organism="Paenibacillus barcinonensis"
FT                   /strain="type strain: BP-23"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:198119"
FT   CDS             122..1120
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynB"
FT                   /product="endo-1,4-beta-xylanase"
FT                   /function="degrades xylan and aryl xylosides"
FT                   /EC_number="3.2.1.8"
FT                   /db_xref="GOA:O69231"
FT                   /db_xref="HSSP:1HIZ"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/Swiss-Prot:O69231"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAA07174.1"
FT                   /translation="MSTEIPSLSASYANSFKIGAAVHTRMLQTEGEFIAKHYNSVTAEN
FT                   QMKFEEVHPREHEYTFEAADEIVDFAVARGIGVRGHTLVWHNQTPAWMFEDASGGTASR
FT                   EMMLSRLKQHIDTVVGRYKDQIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFN
FT                   MAHEADPNALLFYNDYNETDPVKREKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDE
FT                   IRQAIERYASLDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREY
FT                   RSNITSVTFWGVADNYTWLDNFPVRGRKNWPFVFDTELQPKDSFWRIIGQD"
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SQ   Sequence 1219 BP; 318 A; 238 C; 329 G; 334 T; 0 other;
     gaattcgtct gcttgtgatg aaattggtag aatttcaggg ggcaaaacgt ttattttgtt        60
     catggaaagc gcattcatta ttcgatatga tgaaaaaaag aacctgtgag gaggaaccag       120
     gatgtctacc gaaattccgt ccctatctgc atcttatgcc aattcgttca aaataggtgc       180
     ggcagtgcat acgagaatgc tgcagactga aggcgaattc attgcaaagc attataatag       240
     cgtcaccgcg gagaatcaga tgaagtttga agaggttcat ccacgagagc atgaatatac       300
     gtttgaggcg gcagatgaga ttgttgattt tgctgtggct cgtggtattg gtgtaagggg       360
     gcacactctg gtatggcaca atcagacgcc ggcttggatg tttgaagatg cttccggggg       420
     aacggcttcc agagagatga tgctgtcccg actgaagcag catattgata cggtggtggg       480
     ccgttacaaa gaccagattt atgcctggga tgtcgtaaat gaggcgattg aagacaagac       540
     ggatctgatt atgcgtgata caaaatggct gcgtttgctc ggagaggatt atctggttca       600
     ggcattcaat atggctcatg aagcagatcc gaatgccttg ttattctaca acgattataa       660
     tgagacggac ccggttaaac gggagaaaat ttataatctg gttcgttctt tattggatca       720
     gggcgctcct gttcatggca ttggtatgca gggacactgg aatattcacg gtccttctat       780
     ggatgagatt cgtcaggcca tcgagcgtta tgcttcgttg gatgtacagc ttcatgtgac       840
     tgaactggat ctgtctgtgt ttcgtcacga ggatcagcgt accgatctga ccgagccaac       900
     ggcagagatg gcagagctgc agcagaagcg atacgaggat atttttggtc tgttccgtga       960
     atatcgctcc aatatcactt ccgtaacgtt ctggggagtc gctgacaact acacatggct      1020
     ggacaatttc ccggtgcgtg gccgcaaaaa ctggccgttt gtatttgata cagagcttca      1080
     gcccaaggat tccttctggc gtattatcgg gcaagactag aattatataa gtcaaactaa      1140
     agatgtttac acactccgct ggatttcccg gatttaatgc cttgcatgca gcccttgatt      1200
     aagggatagc ttgttaggc                                                   1219
//
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