EBI Dbfetch

ID   AJ002686; SV 1; linear; mRNA; STD; INV; 1848 BP.
XX
AC   AJ002686;
XX
DT   27-JAN-1998 (Rel. 54, Created)
DT   17-NOV-2004 (Rel. 81, Last updated, Version 3)
XX
DE   Caenorhabditis elegans mRNA for alkyl-dihydroxyacetonephosphate synthase
XX
KW   alkyl-dihydroxyacetonephosphate synthase.
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
XX
RN   [1]
RP   1-1848
RA   de Vet E.C.J.M.;
RT   ;
RL   Submitted (11-NOV-1997) to the EMBL/GenBank/DDBJ databases.
RL   de Vet E.C.J.M., Biochemistry of lipids, Institute for biomembranes,
RL   Padualaan 8, Utrecht, 3584 CH, NETHERLANDS.
XX
RN   [2]
RX   DOI; 10.1006/bbrc.1997.7950
RX   PUBMED; 9446784.
RA   de Vet E.C.J.M., Prinsen H.C.M.T., van den Bosch H.;
RT   "Nucleotide sequence of a cDNA clone encoding a Caenorhabditis elegans
RT   homolog of mammalian alkyl-dihydroxyacetonephosphate synthase: evolutionary
RT   switching of peroxisomal targeting signals";
RL   Biochem. Biophys. Res. Commun. 242(2):277-281(1998).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1848
FT                   /organism="Caenorhabditis elegans"
FT                   /strain="CB1489 him-8(e1489)"
FT                   /mol_type="mRNA"
FT                   /sex="Hermaphrodite, male"
FT                   /tissue_type="whole animal"
FT                   /db_xref="taxon:6239"
FT   CDS             21..1814
FT                   /product="alkyl-dihydroxyacetonephosphate synthase"
FT                   /EC_number="2.5.1.26"
FT                   /db_xref="GOA:O45218"
FT                   /db_xref="InterPro:IPR004113"
FT                   /db_xref="InterPro:IPR006094"
FT                   /db_xref="InterPro:IPR016164"
FT                   /db_xref="InterPro:IPR016166"
FT                   /db_xref="InterPro:IPR016167"
FT                   /db_xref="InterPro:IPR016168"
FT                   /db_xref="UniProtKB/Swiss-Prot:O45218"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAA05690.1"
FT                   /translation="MSASYQTIEHDVPQSYRDKILKWNGWGYSDSQFAINKDGHVTFTG
FT                   DKYEISGKVMPHFRPWFENYLGIDLGFVSPAQKLSDVIIDAPVENEDIIEFLQENKISF
FT                   SNEARIRLMRGHGHTVHDMINLREGKIPRLPDIVVWPKSEHEIVKIIEGAMSHNCAIIP
FT                   IGGGTSVTNALDTPETEKRAVISMDMALLDKILWIDRENLTCRAQAGIVGQSLERQLNK
FT                   KGFTCGHEPDSIEFSTLGGWVSTRASGMKKNKYGNIEDLVVHLNFVCPKGIIQKQCQVP
FT                   RMSSGPDIHQIILGSEGTLGVVSEVTIKIFPIPEVKRFGSFVFPNFESGVNFFREVAIQ
FT                   RCQPASLRLMDNDQFVMGQALKVASDSWWADLKSSVSKMYITSWKGFKVDEICAATCVY
FT                   EGNREEVDQHEERLNKLAEQFHGVVGGAENGQYGYRLTFAIAYLRDLGMNHGVLGESFE
FT                   TSVPWDKVLSLCRNVKELMKREAKAQGVTHPVLANCRVTQVYDAGACVYFYFGFNARGL
FT                   KNGLEVYDRIETAARDEIIACGGSISHHHGVGKIRKQWMLTTNGAVGIALLKAIKSELD
FT                   PANIFASANLIDIIGSPHCKL"
FT   5'UTR           <1..20
FT   3'UTR           1816..>1848
XX
SQ   Sequence 1848 BP; 510 A; 408 C; 488 G; 442 T; 0 other;
     cgccactcga cttgcaataa atgtcggcgt cctatcaaac aatcgagcac gacgtgccgc        60
     aatcttatcg cgacaaaatc ctcaagtgga atggctgggg gtacagcgat tcacagtttg       120
     cgattaacaa ggacggacat gtcactttta ccggggataa atacgaaatc tccggaaaag       180
     tgatgccaca cttccgcccg tggttcgaga actacttggg catcgatcta ggcttcgtaa       240
     gcccagccca gaagctttcg gacgtgatca tcgatgcccc tgtcgaaaat gaggatatca       300
     ttgagttcct gcaggaaaac aagatttcct tctcgaatga ggcaagaatc agattgatga       360
     gaggtcatgg gcatacagtt cacgacatga tcaatttgag agagggaaag atcccgagac       420
     ttccggatat cgttgtctgg ccgaaaagcg agcatgagat tgttaagatc atcgaaggag       480
     caatgagcca taactgcgcg atcatcccaa tcggaggtgg tacctctgtc acaaacgctc       540
     tggatacccc agaaaccgaa aaacgagctg tgatctctat ggatatggca cttcttgaca       600
     agattctctg gattgatcga gagaatttga cttgccgagc tcaagctgga attgtcgggc       660
     aatcgttgga gcgtcagttg aacaagaagg gattcacatg tggacatgaa ccggattcca       720
     tcgaattttc tactctcgga ggatgggttt cgactagagc cagtggaatg aagaagaaca       780
     aatacggaaa catcgaagac cttgtcgtcc atctgaactt cgtctgtcca aaaggaatca       840
     tccagaagca atgccaagtc ccaagaatgt catccggacc agacatccat caaatcattc       900
     tggggtccga gggaacgttg ggagtggtgt ccgaagtcac aatcaagatc ttcccaatcc       960
     cagaggtcaa gagattcgga agcttcgtgt tcccgaactt cgagagcgga gtcaacttct      1020
     tccgcgaggt tgccattcaa cgctgtcaac cagcatccct tcgtcttatg gacaacgatc      1080
     aattcgttat gggacaagcg ttgaaggtgg cttcagattc ttggtgggct gacttgaaga      1140
     gctccgtgag caagatgtac atcacatcgt ggaagggttt caaggtcgac gagatttgtg      1200
     cggccacgtg tgtctatgag ggaaatcgcg aagaagtcga tcagcatgag gagaggctga      1260
     ataaattggc cgagcagttc cacggagttg tcggaggcgc cgagaatggt caatatggat      1320
     atcggcttac ttttgctatc gcctacttga gagaccttgg aatgaaccat ggtgtgctcg      1380
     gcgagtcgtt cgaaacctca gttccatggg ataaggttct cagcctttgc aggaatgtca      1440
     aggagctgat gaaacgcgag gcaaaagctc agggagtcac gcatccagtt ttagcgaact      1500
     gcagagtcac ccaggtttac gatgccggag cctgtgtgta cttctatttc ggattcaacg      1560
     ccagaggatt gaaaaatggc ctagaagttt atgatcgtat tgagacagcc gcccgtgacg      1620
     agatcatcgc ttgcggtgga agcatctcac atcaccacgg agtcggaaag atcagaaaac      1680
     aatggatgct gaccacgaac ggagcagtcg gaattgcgtt gttgaaggct atcaagagtg      1740
     agctggatcc ggcgaacatc ttcgccagtg ctaacttaat tgatattatt ggatcaccgc      1800
     attgcaagtt gtagataatc attgtttcgt tttttattat tattggat                   1848
//