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EBI Dbfetch

ID   AJ002527; SV 1; linear; genomic DNA; STD; PRO; 3987 BP.
XX
AC   AJ002527;
XX
DT   31-OCT-1997 (Rel. 53, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Clostridium beijerinckii glucitol transport gene system
XX
KW   glucitol-6-phosphate dehydrogenase; gutA1 gene; gutA2 gene; gutB gene;
KW   gutD gene; orfX; transaldolase.
XX
OS   Clostridium beijerinckii
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium.
XX
RN   [1]
RP   1-3987
RA   Elmore M.J.;
RT   ;
RL   Submitted (29-OCT-1997) to the EMBL/GenBank/DDBJ databases.
RL   Elmore M.J., Pathogen Microbiology, Centre for Applied Microbiology and
RL   Research, Porton Down, Salisbury, Wiltshire, SP4 0JG, U.K..
XX
RN   [2]
RX   PUBMED; 9572925.
RA   Tangney M., Brehm J.K., Minton N.P., Mitchell W.J.;
RT   "A gene system for glucitol transport and metabolism in Clostridium
RT   beijerinckii NCIMB 8052";
RL   Appl. Environ. Microbiol. 64(5):1612-1619(1998).
XX
DR   CABRI; NCIMB 8052.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3987
FT                   /organism="Clostridium beijerinckii"
FT                   /strain="NCIMB 8052"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1520"
FT   CDS             140..688
FT                   /transl_table=11
FT                   /gene="gutA1"
FT                   /product="GutA1"
FT                   /function="Enzyme IIBCgut of the glucitol PTS. Polypeptide
FT                   1"
FT                   /db_xref="GOA:O32332"
FT                   /db_xref="InterPro:IPR004699"
FT                   /db_xref="UniProtKB/Swiss-Prot:O32332"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAA05513.1"
FT                   /translation="MDAIVYFAKGFMYLFEVGGNTFVSWVTGIIPKVLLLLVFMNSIIA
FT                   FIGQDKVDRFAKFASRNVILAYGVLPFLSAFMLGNPMALSMGKFLPERMKPSYYASASY
FT                   HCHTNSGIFPHINVGEIFIYLGIANGITTLGLDPTALGLRYLLVGLVMNFFAGWVTDFT
FT                   TKIVMRQQGIELSNQLKAN"
FT   CDS             706..1716
FT                   /transl_table=11
FT                   /gene="gutA2"
FT                   /product="GutA2"
FT                   /function="Enzyme IIBCgut of the glucitol PTS. Polypeptide
FT                   2"
FT                   /db_xref="GOA:O32333"
FT                   /db_xref="InterPro:IPR004702"
FT                   /db_xref="InterPro:IPR011618"
FT                   /db_xref="InterPro:IPR011638"
FT                   /db_xref="UniProtKB/Swiss-Prot:O32333"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAA05514.1"
FT                   /translation="MEKYNAIKIVKGSGGFGGPLTVKPEEGKDTLLYITGGGAEPEIVE
FT                   KIVNLTGCKAVNGFKTSVPEEQIFLVIIDCGGTLRCGIYPQKRIPTINVMPVGKSGPLA
FT                   KFITEDIYVSAVGLNQISLADSSAEPIKSTKVPEEGKREFKYSADKKVSQSLAENSKSS
FT                   IVQKIGMGAGKVVNTLYQAGRDAVQSMITTILPFMAFVAMLIGIIQGSGFGNWFAKILV
FT                   PLAGNGIGLMILGFICSIPLLSALLGPGAVIAQIVGTLIGVEIGKGTIPPSLALPALFA
FT                   INTQCACDFIPVGLGLAEAEPETVEVGVPSVLYSRFMIGVPRVAVAWVASIGLYQ"
FT   CDS             2578..2946
FT                   /transl_table=11
FT                   /gene="gutB"
FT                   /product="GutB"
FT                   /function="Enzyme IIAgut"
FT                   /db_xref="GOA:O32334"
FT                   /db_xref="InterPro:IPR004716"
FT                   /db_xref="InterPro:IPR018454"
FT                   /db_xref="UniProtKB/TrEMBL:O32334"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAA05515.1"
FT                   /translation="MSSKIIYENKVKDLGDLAETFLEEGMIIFFGDNAPDTLADYCYSI
FT                   NIKEVKETIKPGQVFMIDGIAFEITAVGDVAEKNLVSLGHITVAFNGSKVPTLSGTICV
FT                   EKKEIPKLKIGSELSILA"
FT   CDS             1833..2513
FT                   /transl_table=11
FT                   /gene="orfX"
FT                   /product="OrfX"
FT                   /function="putative transaldolase (37.4% identity to talC
FT                   of E.coli)"
FT                   /db_xref="GOA:O32335"
FT                   /db_xref="HSSP:1L6W"
FT                   /db_xref="InterPro:IPR001585"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="InterPro:IPR018225"
FT                   /db_xref="UniProtKB/TrEMBL:O32335"
FT                   /protein_id="CAA05516.1"
FT                   /translation="MKLIIDDVNIEKIKDVFSIFQIDGVTSNPSILHKYGKQPYEILIK
FT                   IREFIGENSELHVQVISESSEGMLKEAHKIIKELGKNTYVKIPVTRDGLKAIKILRKEE
FT                   INVTATAIYTQMQAYLAGKAGAQYAAPYVNRIDNLGANGVQVAKDIHDIFEKNNFKTEV
FT                   LAASFKNSQQVLELCKYGIGAATISPDVIEGLIKNDCVDVAVENFKKDFEILCGQGNTM
FT                   LNCR"
FT   CDS             3029..3844
FT                   /transl_table=11
FT                   /gene="gutD"
FT                   /product="glucitol-6-phosphate dehydrogenase"
FT                   /db_xref="GOA:O32336"
FT                   /db_xref="HSSP:1AE1"
FT                   /db_xref="InterPro:IPR002198"
FT                   /db_xref="InterPro:IPR002347"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:O32336"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAA05517.1"
FT                   /translation="MKNTWLNLEGKTAIVTGGASGIGKAVAQEFLNNGANVVVCDMNPN
FT                   KPEFDDHNGHMEYIVTNVADRDSVEKMIEKAKEITGTIDIIVNNAGINIPRLLVDKKEP
FT                   KGKFELDENVWDKVMNVNVKGVFLCAQVAAREMASQGKGVIINMSSESGLEGSEGQSVY
FT                   AASKNAVNSLTRSWAKELGKLGIRVIGVAPGILEATGLRTLEYETALAYTRGITVEELR
FT                   AGYSKTSTTPLGRSGKLSEVADLVCYLASDRASYIHGVTYNIAGGKTRG"
XX
SQ   Sequence 3987 BP; 1478 A; 474 C; 816 G; 1219 T; 0 other;
     agtactagaa gcctcttcca attataacgt tattatgggc ggtggcgaag ttgtagaatc        60
     tcaaagtcca ttacaaagat taggtaatat ttttacagct aaaaaattaa aagctcacaa       120
     ttagaaagga gatattaata tggacgcaat tgtttatttt gcaaaaggat ttatgtattt       180
     atttgaagtt ggtggaaata catttgttag ttgggtaacg ggaattatcc caaaggtatt       240
     attactttta gtttttatga attcaataat tgcttttatt ggacaagata aagttgatag       300
     atttgcaaag tttgcatcta gaaatgttat attagcttat ggagttttac cattcctatc       360
     agcctttatg ttaggtaatc caatggcatt atcaatggga aaatttcttc ctgaaagaat       420
     gaaaccaagc tactatgcat cagcatcgta tcattgtcat acaaacagcg gtatttttcc       480
     tcacattaat gtaggtgaaa tattcattta cctaggtatt gcaaatggta ttacaactct       540
     tggccttgat ccaacagctt taggacttcg ttatttatta gtaggtttag taatgaattt       600
     ctttgcagga tgggtaactg attttactac aaagattgtt atgagacaac aaggtattga       660
     attaagtaat caacttaagg caaattagtt taggagggta ttcatatgga aaaatataat       720
     gcaattaaaa ttgtaaaagg tagtggaggc tttggcggtc cacttacagt aaaacctgaa       780
     gaaggaaaag atacattatt atatattaca ggtggtggag ctgaacctga aattgtagaa       840
     aagattgtta acttaacagg atgtaaagcg gtaaatggat ttaaaacatc tgtaccagag       900
     gaacaaattt tcttagttat tattgattgt ggtggaacac ttcgctgtgg aatataccca       960
     caaaagagaa ttccgacaat aaatgttatg ccagtaggta aaagtgggcc tttagcaaaa      1020
     ttcattacag aagacattta tgtatctgca gttggcttaa atcaaatttc tttagctgat      1080
     tcaagtgcag agcctataaa gagcacaaaa gtgcctgaag aaggaaaaag agaatttaaa      1140
     tatagtgctg ataagaaagt atcacaaagt ttggctgaaa acagtaaatc tagtattgtc      1200
     caaaaaattg gtatgggagc aggtaaagtt gtaaatacac tataccaagc aggccgtgat      1260
     gcagttcaat caatgattac aacaatatta ccattcatgg catttgttgc aatgctaata      1320
     ggaattatac aaggttcggg atttggtaat tggttcgcta aaatattagt accattagca      1380
     ggaaacggaa ttggacttat gattcttgga ttcatatgct ctattcctct attatcagca      1440
     ttacttggac caggtgctgt tatagcacaa atcgtaggta ctttaattgg tgttgaaata      1500
     ggtaaaggga ctattcctcc aagcttagca ttaccagcat tattcgctat taatacacaa      1560
     tgtgcatgtg actttattcc agtaggttta ggtctagctg aagcagaacc agaaacagta      1620
     gaggttggtg ttccatctgt attgtattca cgtttcatga ttggtgtacc tagagtagca      1680
     gttgcatggg ttgcaagtat aggattgtat caataaacta tgaaatttat ttaattgcga      1740
     ttgagtggtt cttatgaatc gctcaattgc accaaggaaa atatattgtt gatttagatg      1800
     caaggagtgg aataaaagga ggtttatcca tagtgaaact aattattgat gatgtaaata      1860
     ttgaaaaaat aaaagatgtt ttcagcatat tccaaattga tggggtaact agtaatccga      1920
     gtattttgca taagtatgga aaacagccgt atgaaatatt aataaaaata cgtgaattta      1980
     ttggggaaaa ctcggaatta catgtacagg tgatttctga aagttcagaa ggtatgctta      2040
     aagaagcaca taaaattatt aaagagctag gtaaaaatac ttatgtgaag atacctgtaa      2100
     ctagagatgg attaaaggct ataaaaattc ttagaaaaga agaaattaat gttactgcta      2160
     ctgctatata tactcaaatg caagcatatc tagctggaaa agcaggtgct caatatgctg      2220
     ctccatatgt aaaccgaatt gataatttgg gagcaaatgg tgttcaagtg gcaaaagaca      2280
     ttcacgatat ttttgagaaa aataatttta aaacagaagt attagcagct agttttaaga      2340
     attcacaaca agtattagaa ttatgcaagt atggaattgg agcggctaca atttcacctg      2400
     atgtaataga aggtttaatt aaaaacgatt gcgtggatgt agctgtagag aactttaaaa      2460
     aagattttga gatattatgt ggtcaaggta ataccatgtt aaattgccga taatctaagt      2520
     agcttagaat aaataataat tttagaaaga aatatatttg aagggatgaa agcatctatg      2580
     agtagtaaga taatctatga aaataaagta aaagacttag gagatttagc agaaacattc      2640
     ttagaagaag gaatgataat attttttgga gataatgcac cagatacact agcagattac      2700
     tgttactcta ttaatataaa ggaagttaaa gaaacaatta aacctggaca agtatttatg      2760
     attgatggaa tagcttttga aataacagct gttggagatg tggcagagaa gaatctagtg      2820
     agtttaggac atataactgt tgcgtttaat ggttctaaag tacctacttt atcaggaaca      2880
     atttgtgtgg agaaaaaaga aattcctaaa cttaaaatag gaagtgaact atctatatta      2940
     gcataattat atctaaaatt tatatgaaat cgaaatgaat aataaaatgg cattaaataa      3000
     tgaagttaaa taatcaggag gaatttttat gaaaaataca tggcttaact tagaaggaaa      3060
     aacagcgatt gtaacagggg gagcatctgg tattggtaag gcagttgctc aagagttttt      3120
     aaataatggt gcaaatgtag ttgtttgtga tatgaatcca aacaaacctg aatttgatga      3180
     tcataatgga catatggaat atatagttac taatgttgca gatagagata gcgtagaaaa      3240
     aatgattgag aaggctaaag agattactgg aaccattgat ataattgtaa ataatgcagg      3300
     tattaatatt cctagattac tagttgataa aaaagaacca aaaggaaaat ttgagctaga      3360
     tgaaaatgtt tgggataaag ttatgaatgt aaatgtaaaa ggtgtatttc tatgtgctca      3420
     agtagctgcc agagagatgg caagtcaagg aaaaggggtt attataaata tgtcttctga      3480
     aagcggattg gaaggatcag aggggcaaag tgtctatgca gcaagtaaga atgcagtaaa      3540
     ttctttaacc cgctcatggg caaaggagct aggaaaatta ggtataagag ttatcggagt      3600
     tgcgccagga attctagaag ctacaggact cagaacttta gaatatgaga cagcgctagc      3660
     ttatacgaga ggaattactg tagaagagtt aagagcagga tatagtaaaa cttcaacaac      3720
     tccattagga agatcaggca agctttcaga agttgcagac ttagtttgct atttagctag      3780
     tgatagagca agttatattc atggagttac ttacaatatt gctgggggaa aaacaagagg      3840
     ttaaataaaa aaagatatta gtatagaata aatttaatta tttggccaat tagcacagaa      3900
     taaagttaaa aaattaacaa agttatctgg attttaataa ttgaaaaata tataatttat      3960
     attttataaa gagaaaactt agtttca                                          3987
//


  
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