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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF526879; SV 1; linear; mRNA; STD; MAM; 1600 BP.
XX
AC   AF526879;
XX
DT   06-AUG-2002 (Rel. 72, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 5)
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DE   Sus scrofa quinoid dihydropteridine reductase mRNA, complete cds.
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KW   .
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OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-1600
RX   DOI; 10.1046/j.1365-2052.2002.00938_6.x
RX   PUBMED; 12464030.
RA   Kim J.G., Nonneman D., Vallet J.L., Rohrer G.A., Christenson R.K.;
RT   "Linkage mapping of a single nucleotide polymorphism (SNP) in the porcine
RT   QDPR gene to chromosome 8";
RL   Anim. Genet. 33(6):474-474(2002).
XX
RN   [2]
RP   1-1600
RA   Kim J.G., Vallet J.L., Christenson R.K.;
RT   ;
RL   Submitted (03-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL   Reproduction Research Unit, USDA, ARS, U.S. Meat Animal Research Center,
RL   P.O. Box 166, Clay Center, NE 68933, USA.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1600
FT                   /organism="Sus scrofa"
FT                   /chromosome="8"
FT                   /map="25.7 cM on MARC swine chromosome 8 linkage map"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:9823"
FT   CDS             53..784
FT                   /codon_start=1
FT                   /product="quinoid dihydropteridine reductase"
FT                   /note="QDPR"
FT                   /db_xref="GOA:Q8MJ30"
FT                   /db_xref="InterPro:IPR002198"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8MJ30"
FT                   /protein_id="AAM91996.1"
FT                   /translation="MAAAAAGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE
FT                   EASANVVVKMTDSFTEQADQVTAEVGKLLGTEKVDAILCVAGGWAGGNAKSKSLFKNCD
FT                   LMWKQSMWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSL
FT                   AGKDSGMPSGAAAIAVLPVTLDTPLNRKSMPHADFSSWTPLEFLVETFHDWIIEKNRPS
FT                   SGSLIQVVTTQGKTELTPAYF"
FT   variation       1075
FT                   /replace="a"
XX
SQ   Sequence 1600 BP; 356 A; 406 C; 453 G; 385 T; 0 other;
     cccacgcgta cgcggacgcg tgggcggacg cgtggggagc cggaggagcg ggatggcggc        60
     ggcagctgcg ggcgaggcgc gccgggtgct ggtgtacggc ggccggggcg ccctgggctc       120
     ccgatgcgtg caggcgttcc gggcccgcaa ctggtgggtc gccagcatcg acgtggtgga       180
     gaatgaagag gccagtgcca atgtcgtcgt taaaatgaca gactcgttta cggagcaggc       240
     cgaccaggtg actgctgagg tcggaaagct cttgggtaca gagaaggtgg acgccatcct       300
     ttgtgtggcc ggaggatggg ccgggggcaa tgccaagtcc aagtctctct ttaaaaactg       360
     tgacctgatg tggaagcaga gcatgtggac gtcaaccatc tccagccacc tggccaccaa       420
     gcatctcaag gaaggaggcc tcctgacctt ggccggggcc aaggccgccc tggatgggac       480
     gcccgggatg atcggctatg gcatggccaa gggcgccgtc caccagctct gccagagcct       540
     ggccgggaag gacagcggca tgccatccgg ggctgccgcc atcgccgtgc tcccggtcac       600
     cctggacacg cccttgaaca ggaagtcgat gccccacgcg gacttcagct cctggacgcc       660
     cttagaattc ctggtcgaaa ccttccacga ctggatcata gaaaaaaacc gaccaagctc       720
     aggcagcctc atccaggtgg tgaccacgca gggaaagaca gagctcaccc cggcgtattt       780
     ttaagcttca ttttgttgtc tgtgaggggc ctgtcagaga agtcattaat ccatccgtgg       840
     ggccccgcct ggccctgcct tttctgtaat cctgttcgtg gtaggagata gtcctatttg       900
     tctcccacct catgtgcatt tgttctccca ggacagtggc aaaggtttaa gtgaaataaa       960
     aacacgtgag gcccacagca cggtcagttg gtgtcaacca cgtaattgag gcctcaggac      1020
     ggccccctct gtgtccacgt tgaattgcat ttgtgatgct gtttatgtgt ccccgatggt      1080
     ggccgtccac ctgtctaggt cagagatttg ctgggatggg ggaggtttgg agcttgagtt      1140
     atttttgaat gttatgttca tgtgactgat gtagtttttg gagcttcgaa gtaaactgcc      1200
     ttaaaacgcc tcctgtgctg taagccaaac cctgtggact ctgttaagat atctttttcc      1260
     cgtgcagtcg ccacgtgctc aagagaacta cttgtgattg tttggaattt aacttcctaa      1320
     taaatgccct tcatttatta tgttgtcgtc tctaattaaa atgcatctta taaacagtca      1380
     cagatgaatg tacaaggatt atgttcatgt gactgatgta gtttttggag cttcgaagta      1440
     aactgcctta aaacgcctcc tgtgctgtaa gccaaaccct gtggactctg ttaagatatc      1500
     tttttcccgt gcagtcgcca cgtgctcaag agaactactt gtgattgttt ggaatttaac      1560
     ttcctaataa atgcccttca tttaaaaaaa aaaaaaaaaa                            1600
//
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