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EBI DbfetchID AF525024; SV 1; linear; genomic DNA; STD; PLN; 2692 BP. XX AC AF525024; XX DT 03-JUN-2003 (Rel. 76, Created) DT 17-JUN-2003 (Rel. 76, Last updated, Version 2) XX DE Hordeum vulgare subsp. vulgare HGA6 (HGA6) gene, complete cds. XX KW . XX OS Hordeum vulgare subsp. vulgare (domesticated barley) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Pooideae; Triticeae; Hordeum. XX RN [1] RP 1-2692 RX PUBMED; 12807788. RA Brunner S., Keller B., Feuillet C.; RT "A large rearrangement involving genes and low-copy DNA interrupts the RT microcollinearity between rice and barley at the Rph7 locus"; RL Genetics 164(2):673-683(2003). XX RN [2] RP 1-2692 RA Brunner S., Keller B., Feuillet C.; RT ; RL Submitted (25-JUN-2002) to the EMBL/GenBank/DDBJ databases. RL Institute of Plant Biology, University of Zurich, Zollikerstr. 107, Zurich RL 8008, Switzerland XX DR GrainGenes; AF525024; AF525024. XX FH Key Location/Qualifiers FH FT source 1..2692 FT /organism="Hordeum vulgare subsp. vulgare" FT /chromosome="3HS" FT /sub_species="vulgare" FT /cultivar="Morex" FT /mol_type="genomic DNA" FT /db_xref="taxon:112509" FT gene <1..>2692 FT /gene="HGA6" FT mRNA join(<1..136,269..427,565..900,1042..1161,1530..>2692) FT /gene="HGA6" FT /product="HGA6" FT CDS join(1..136,269..427,565..900,1042..1161,1530..2692) FT /codon_start=1 FT /gene="HGA6" FT /product="HGA6" FT /note="putative HGA family member" FT /db_xref="GOA:Q7XZU4" FT /db_xref="InterPro:IPR007657" FT /db_xref="UniProtKB/TrEMBL:Q7XZU4" FT /protein_id="AAP49177.1" FT /translation="MKQQGYGGVRFESQRFRLLSIVVGCFLISVTFLLSTRPDSIVFDT FT PPARTAIKTVKPSSSFSSPRGLGRDFLVDIAPKQGDAHGRQPQLSAGEKTETEWVKDTV FT IIQESSAVAAERAEQEEADKATAPTPARRGRYPRYYVHSCAGRTGNVPHDANKSWGARD FT VDVLTELAGATEEVVRDHAAAITARPAVDTTPTPATTTRHDQDQPLPVEEETRKAGGGK FT IKLQAEPAATEPQQLPTPGRLETSEPERRASRDQPPQLLPPLCDFSDRRSDVCDFTGDI FT RMDANASTFFLVVDAATAASHKVRPYPRKGDPTCMGRVPEITMRTTSSSSPPECTRTHG FT VPAVTFSIGGYTGNIFHDFSDVLVPLYNTVHRYRGDVQLVMANVAPWWLVKYDKLLREL FT SRHAPLDLAAVAAKGETHCFRHAVVSLRAHRELIIERDRSPDGLATPDFTRFIRRALSL FT PRDAPTRLADGTGRKPRLLIIARHRTRILLNLGDMMRVAEEAGFEAAVSELDVGDPISR FT VGAEINSADVLVGVHGAGLTNMMSLAPGATMVQVVPWGGLQWFARMDYGDPAEALGLRY FT VQYEIGVDESSLKDKYPRGHKIFTDPTSLHKKGFGFMRRTLMDGQNITIDLGRFRACSS FT RR" XX SQ Sequence 2692 BP; 534 A; 869 C; 803 G; 485 T; 1 other; atgaagcagc agggctacgg cggcgtgcgg ttcgagtcgc agcgattccg gctgctgtcc 60 atcgtcgtcg gctgcttcct catctccgtc accttcctcc tctccacccg ccccgactcc 120 atcgtcttcg acacgcgtga gtacaccctt cttctccgcc ggccatgcac ctttttcctt 180 tgacggccgc tctgagttag tacggacctg aagaaacgat ggtgcgtgca gtgagcccca 240 agatggsgtg gctggaggaa ccgcggagcg ccggcgagga cggccatcaa aaccgtcaag 300 ccctcctcct ccttctcctc gccccgtggc ttgggccggg acttcctggt cgacatcgcg 360 ccaaagcagg gagacgccca tggccggcag ccgcagctga gcgccggcga gaagacagag 420 acggaatgtg cgtagcaccc accggccagc cagcggcaga gcgtcataaa tcatatttcg 480 ccggcggccg gccagactag aacagctact cttgcctgca cgtcgtggat ggagaagttc 540 attttcttct acttgttgtc gcaggggtta aggacacggt gatcatccag gagagcagcg 600 ccgtcgccgc cgagagggca gagcaggagg aggcggacaa ggccacagcg ccgacgccgg 660 cgcggcgagg acgctacccc aggtactacg tacattcgtg cgcgggacga actggaaacg 720 tgccccacga cgcgaataaa tcatggggtg cgcgagacgt tgacgtgtta accgaactgg 780 caggtgcgac ggaggaggtg gtccgcgacc acgcggctgc gatcaccgcg cgtccggccg 840 tggacacgac gccgacgcct gcgacgacga ctcggcacga ccaggaccag ccgctgccag 900 gtaaccaacc aacgaactaa cccgccaaac gaattccaaa cccatcgtgc acgcacggtc 960 ggcacgaatg gagaattcca aagcccaact gacccggtga agtgacaagc ataacgtacg 1020 gtaatttggt tatttcttca gtggaggagg agacgcgcaa ggccggcggc gggaagatca 1080 agctccaggc cgagccggcg gcgacggagc cgcagcagct gccgacgccg gggaggttgg 1140 aaacgtcgga accggaacga cgtacgttgt agcagtcgca ttttattcgt aacatgggcc 1200 acattattat tttgcgaact cgattaagag catggttaat agtatagcta actgctgact 1260 ataagccatc ttataatcca tcttataact atcttatata atagttagct ataaaagaat 1320 actactttta tcatatatta tccaactttc attctcacaa atcacctaga agcacgtgct 1380 agagctagct cttcacgaag agatcgctcc ctttctctct tctcttctct ctcatccaac 1440 tcaacaacaa tatagtattt tagttttaca gctgactgta ccttattgta cttgctctaa 1500 cgaacgtggc gtgcttcatg cttgtacagg tgccagccgg gaccagccgc cgcaacttct 1560 gccgccgctg tgtgacttct ccgaccgtcg cagcgacgtg tgcgacttca ccggtgacat 1620 ccgcatggac gccaacgcgt caaccttctt cctggtagtc gacgccgcca cggccgcgag 1680 tcacaaggtg cggccgtacc cgcgcaaggg cgacccaacg tgcatgggcc gcgtgcccga 1740 gatcaccatg cgcaccacgt cctcctcgtc gccgcctgag tgcaccagga cgcacggcgt 1800 gccggcggtg acgttctcga tcggcgggta cacgggcaac atcttccacg acttctctga 1860 cgtgctcgtc ccgctctaca acacggtgca ccggtaccgc ggcgacgtgc agctggtcat 1920 ggcgaacgtg gcgccctggt ggctggtcaa gtacgacaag ctcctccgcg agctctcccg 1980 ccacgcgccg ctcgacctcg ccgcggtggc cgccaagggg gagacgcact gcttccggca 2040 cgcggtggtg agcctccgcg cgcaccggga gctcatcatc gagcgcgacc gcagcccgga 2100 cggcctcgcc acgccggact tcacccggtt catccgtcgc gcgctctccc tgccccggga 2160 cgcgcccacc cgcctcgccg acggcacggg ccgcaagccc cggctgctca tcatcgcgcg 2220 acaccggacg cgcattctgc tcaacctggg cgacatgatg cgcgtggcgg aggaggccgg 2280 gttcgaggcg gcggtgagcg agttggacgt cggtgacccc atctcccgtg tcggggcgga 2340 gatcaactcc gccgacgtgc tggtgggcgt gcacggcgcc gggctgacca acatgatgtc 2400 cctcgcgccc ggggcgacca tggtgcaggt ggtgccgtgg ggcggcctgc agtggttcgc 2460 gcgcatggac tacggcgacc cggcggaggc cttggggctc cggtacgtgc agtacgagat 2520 cggcgtcgat gagagctcgc tcaaggacaa gtaccccagg ggacacaaga tcttcaccga 2580 cccgacgtcg ctccacaaga aagggttcgg gttcatgcgt cggacgctca tggacggcca 2640 gaacatcaca atcgacctcg gccgcttccg cgcgtgctcc agcaggcgct ag 2692 // |
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