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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF503368; SV 1; linear; genomic DNA; STD; PLN; 1170 BP.
XX
AC   AF503368;
XX
DT   14-MAY-2002 (Rel. 71, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
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DE   Ipomoea batatas beta-amylase gene, partial cds.
XX
KW   .
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OS   Ipomoea batatas (sweet potato)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea.
XX
RN   [1]
RP   1-1170
RX   DOI; 10.1016/S1055-7903(03)00249-5
RX   PUBMED; 15012943.
RA   Rajapakse S., Nilmalgoda S.D., Molnar M., Ballard R.E., Austin D.F.,
RA   Bohac J.R.;
RT   "Phylogenetic relationships of the sweetpotato in Ipomoea series Batatas
RT   (Convolvulaceae) based on nuclear beta-amylase gene sequences";
RL   Mol. Phylogenet. Evol. 30(3):623-632(2004).
XX
RN   [2]
RP   1-1170
RA   Rajapakse S.;
RT   ;
RL   Submitted (17-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, Clemson University, 132 Long Hall, Clemson, SC 29634,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1170
FT                   /organism="Ipomoea batatas"
FT                   /cultivar="Mokuau"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:4120"
FT   mRNA            join(<1..174,931..>1170)
FT                   /product="beta-amylase"
FT   CDS             join(<1..174,931..>1170)
FT                   /codon_start=1
FT                   /product="beta-amylase"
FT                   /db_xref="GOA:Q8LRT8"
FT                   /db_xref="HSSP:1FA2"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q8LRT8"
FT                   /protein_id="AAM27213.1"
FT                   /translation="HAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQP
FT                   AEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKL
FT                   KMSGLTYLRLSDDLLQTDNFELFKKFVKKMHADL"
XX
SQ   Sequence 1170 BP; 342 A; 244 C; 284 G; 300 T; 0 other;
     catgcggcgg agctcaccgc cggattctac aatgtggcgg gaagagacgg ttatcggcct        60
     attgccagga tgctggcaag gcaccatgcc actctgaatt tcacttgcct tgagatgaga       120
     gactccgaac agcctgccga ggccaagagt gctcctcaag aactcgttca acaggtacgt       180
     accataacca aaattctgca acatcaaaat gaatatataa aagaagccta ggagctagca       240
     tagtggttga tcaccctacc tcaagtcata actgaaatcg gaggtagggg ttgattgtgt       300
     tagcctaact tgagcagtag tgatgtagtg aatacatcga aatatacgaa tatgtctaag       360
     tatcgtctag ggttcggtat gcaattcagc ttgagtaaat gtgcgggctt gggagcttta       420
     tatagaggtt ggaggggaca ctaccaaaaa aaagtagtgc cgctttcttt cataacagag       480
     ttgtggttcc cggcacatgt cgcgcttgtc ctttagcata aaaggatgtg taattgaaat       540
     agacattaag gtcggatgtt atagaggttg gaagggacac atgccgagct taccctttag       600
     catacaagta tgtcggatca aaataacccg tctagacatt aaggtccgac gttatagagg       660
     ttggagggga cacatgtcgg acttgtgttt agcatacaag gatgtccgat caaaataacg       720
     ggtcaggcgt tccaactcaa gttcagggta aattgtgctt ccactaagac tcaaatgcac       780
     aacctcccat atgaaagtac agtttagtgt cactaaacca caagatctta gcttgtggtc       840
     ttctttattt aagcccggcc actagctatt taccaacttg gttactttgg acatgttaat       900
     taattaaagt tgagttgaat gattgtgcag gtgttgagca gcggatggaa agagtatatc       960
     gatgtggcag gtgagaatgc actgccaaga tatgatgcca cggcatacaa ccaaatgctt      1020
     ctaaacgtca ggccaaacgg cgtcaacctt aacggccctc ccaagctcaa gatgtccggc      1080
     ttgacatatc tccgtttgtc ggacgatctg ttacagacag acaacttcga actcttcaag      1140
     aaattcgtca agaagatgca cgctgatctg                                       1170
//
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