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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF503336; SV 1; linear; genomic DNA; STD; PRO; 1596 BP.
XX
AC   AF503336;
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DT   06-MAY-2002 (Rel. 71, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Rickettsia typhi signal peptidase I (lepB) gene, complete cds.
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KW   .
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OS   Rickettsia typhi
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC   Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
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RN   [1]
RP   1-1596
RX   DOI; 10.1128/JB.185.15.4578-4584.2003
RX   PUBMED; 12867468.
RA   Rahman M.S., Simser J.A., Macaluso K.R., Azad A.F.;
RT   "Molecular and functional analysis of the lepB gene, encoding a type I
RT   signal peptidase from Rickettsia rickettsii and Rickettsia typhi";
RL   J. Bacteriol. 185(15):4578-4584(2003).
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RN   [2]
RP   1-1596
RA   Rahman M.S., Radulovic S., Azad A.F.;
RT   ;
RL   Submitted (12-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Microbiology and Immunology, University of Maryland School of Medicine, 655
RL   W. Baltimore Street, Baltimore, MD 21201, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1596
FT                   /organism="Rickettsia typhi"
FT                   /isolate="Ethiopian AZ322"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:785"
FT   gene            502..1296
FT                   /gene="lepB"
FT   CDS             502..1296
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="lepB"
FT                   /product="signal peptidase I"
FT                   /note="LepB"
FT                   /db_xref="GOA:Q8L2J7"
FT                   /db_xref="HSSP:1B12"
FT                   /db_xref="InterPro:IPR000223"
FT                   /db_xref="InterPro:IPR011056"
FT                   /db_xref="InterPro:IPR015927"
FT                   /db_xref="InterPro:IPR019757"
FT                   /db_xref="InterPro:IPR019758"
FT                   /db_xref="InterPro:IPR019759"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8L2J7"
FT                   /protein_id="AAM22228.1"
FT                   /translation="MNRDNTKTNKTVKQEFASFTFVICIALVIRILIMEPFTVPTGSMK
FT                   ATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRVFAREPERGDIVVFRPPNDMSVRY
FT                   IKRLIGLPGDKIQLIDDVIYINDKKIERTEVGTYIGEDGIKYLKFKETLPNGRTYFSYK
FT                   LAPIFGIISNDRYSNTGVFYVPEGQYFFLGDNRDRSNDSRVNLGFVPFENFIGKAQFIW
FT                   FSTKITWWDNDIGIINLILKLKPWIESVRLSRIFKNLYNVDE"
XX
SQ   Sequence 1596 BP; 565 A; 188 C; 300 G; 543 T; 0 other;
     tattattgtt atggatagat ctactgacat tatttatgca atagcacgcc tgagtaaatt        60
     ttatatgcat gaatcatgtg ggcaatgtac cccttgccga gagggtactg gttggatgtg       120
     gcgagttatg atgcgcttag ttaatggtaa tgcaaaaaaa accgaaatag aaactttgtt       180
     gaatgttaca aaagaaatag aggggcatac tatttgtgcc ttgggtgatg ctgcagcttg       240
     gccaatccaa gggttgatac gacattttag agatgaaatt gaggagagga tcaagaattt       300
     tggcatagct taaggtctag tactatagag tattccattt agaaactaat actccctata       360
     taacttggta attgcaattt gcataatata ttgtatccta agggataaag tggccatata       420
     acattacgga ttattcgatg cagattttag ctaggaatat aatcgagtac ttacaatata       480
     ctaaataatt taaaaaattt tatgaacaga gataatacaa aaactaataa aacagttaaa       540
     caggagtttg cttcttttac ttttgtaata tgtatcgctt tagttattag aatacttatt       600
     atggaaccat ttacagttcc aaccggttcc atgaaagcaa ctatccttga gaatgattat       660
     atattttcta cgaaatatag ctacggttat agtaattact ctttatcttt ttttgatttt       720
     attcctcttt ttaaagggcg agtatttgca cgtgaaccag agcgtggtga tattgtagtt       780
     ttccgcccac ctaacgatat gagtgttaga tatataaaac gtttaatagg gctaccaggc       840
     gataaaattc aattgattga tgatgtaata tatattaatg acaaaaaaat agaaaggaca       900
     gaggttggga cttatatagg tgaagatgga ataaaatatt taaaatttaa agaaacatta       960
     ccaaatggca gaacatattt ttcttataag cttgcaccta tttttggtat tatatctaat      1020
     gatagatata gtaatactgg tgtgttttat gtgcctgaag gacaatattt ctttttaggt      1080
     gataatagag atcggtcaaa tgatagtaga gtaaatcttg gatttgtacc atttgaaaat      1140
     tttattggta aagcacaatt tatttggttc tcaacaaaaa taacctggtg ggataatgat      1200
     ataggaatta ttaatctaat actcaagtta aagccatgga ttgaatctgt tagattaagt      1260
     cgaatattca agaatcttta taatgtggac gaataatgga atcatttgag aagctagaaa      1320
     cgctacttgg ctatagtttt aaaaataaag agcttttaat agaggcgttg agtcacccat      1380
     ctttaagaca gtatcacgaa tacaagtatg ataaagatta tgaacgatta gaatttttag      1440
     gtgatgccgt attaaattta ttaattacgg aaattttatt taagaatttt gaaaattata      1500
     aagaggggaa tttagctaaa attagatcat atttagtttg taaagaaact atatgtattg      1560
     ttgggacaaa gttagcttta aaagattata taatta                                1596
//
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