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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF490902; SV 1; linear; genomic DNA; STD; FUN; 500 BP.
XX
AC   AF490902;
XX
DT   12-SEP-2002 (Rel. 73, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 6)
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DE   Gibberella avenacea Cbh-C (Cbh-C) gene, partial cds.
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KW   .
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OS   Gibberella avenacea
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC   Hypocreomycetidae; Hypocreales; Nectriaceae; Gibberella.
XX
RN   [1]
RP   1-500
RX   DOI; 10.1111/j.1574-6968.2002.tb11313.x
RX   PUBMED; 12167545.
RA   Hatsch D., Phalip V., Jeltsch J.M.;
RT   "Development of a bipartite method for Fusarium identification based on
RT   cellobiohydrolase-C: CAPS and Western blot analysis";
RL   FEMS Microbiol. Lett. 213(2):245-249(2002).
XX
RN   [2]
RP   1-500
RA   Hatsch D., Phalip V., Jeltsch J.M.;
RT   ;
RL   Submitted (11-MAR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Phytopathologie, Ecole Superieure de Biotechnologie de Strasbourg -
RL   UMR7100, Boulevard Sebastien Brant, Illkirch-Graffenstaden F-67400, France
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FH   Key             Location/Qualifiers
FH
FT   source          1..500
FT                   /organism="Gibberella avenacea"
FT                   /isolate="12"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:40199"
FT   mRNA            join(<1..283,342..>500)
FT                   /gene="Cbh-C"
FT                   /product="Cbh-C"
FT   CDS             join(<1..283,342..>500)
FT                   /codon_start=2
FT                   /gene="Cbh-C"
FT                   /product="Cbh-C"
FT                   /note="similar to Fusarium oxysporum GuxC presented in
FT                   SwissProt Accession Number P46238"
FT                   /db_xref="GOA:Q8J144"
FT                   /db_xref="HSSP:1GPI"
FT                   /db_xref="InterPro:IPR001722"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="UniProtKB/TrEMBL:Q8J144"
FT                   /protein_id="AAN07161.1"
FT                   /translation="VDTTKKVTVVTQFKKGSNGRLSEITRLYVQNGKVIANSESKIPGN
FT                   SGSSLTADFCSKQKSVFGDIDDFSKKGGWSGMSDALESPMVLVMSLWHDHHSNMLWLDS
FT                   TYPTDSTKLGAQRGSCATTSGVPSDLERDVPNSKASFSNIKFG"
XX
SQ   Sequence 500 BP; 107 A; 169 C; 110 G; 114 T; 0 other;
     cgtcgacacc accaagaagg tgactgtcgt cacccagttc aagaagggca gcaacggccg        60
     tctctccgag atcactcgcc tgtacgttca gaacggcaag gtcatcgcca actccgagtc       120
     caagattccc ggaaactccg gcagctctct taccgccgac ttctgctcca agcagaagag       180
     cgtctttggc gacatcgatg acttctccaa gaagggtggc tggagcggta tgagcgacgc       240
     tcttgaatcc cccatggttc tcgttatgtc tctctggcac gacgtaagtt cacgcacatc       300
     tgtctccctg catttaccat gatactgact cttatacgca gcaccactcc aacatgctct       360
     ggctcgactc tacttacccc accgattcca ccaagctcgg tgctcagcga ggctcttgcg       420
     ctaccacctc tggcgttccc tccgacctcg agcgagacgt ccctaactcc aaggcttcct       480
     tctccaacat taagttcggt                                                   500
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