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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF490900; SV 1; linear; genomic DNA; STD; FUN; 496 BP.
XX
AC   AF490900;
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DT   12-SEP-2002 (Rel. 73, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 5)
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DE   Gibberella pulicaris isolate 10 Cbh-C (Cbh-C) gene, partial cds.
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KW   .
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OS   Gibberella pulicaris
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC   Hypocreomycetidae; Hypocreales; Nectriaceae; Gibberella.
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RN   [1]
RP   1-496
RX   DOI; 10.1111/j.1574-6968.2002.tb11313.x
RX   PUBMED; 12167545.
RA   Hatsch D., Phalip V., Jeltsch J.M.;
RT   "Development of a bipartite method for Fusarium identification based on
RT   cellobiohydrolase-C: CAPS and Western blot analysis";
RL   FEMS Microbiol. Lett. 213(2):245-249(2002).
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RN   [2]
RP   1-496
RA   Hatsch D., Phalip V., Jeltsch J.M.;
RT   ;
RL   Submitted (11-MAR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Phytopathologie, Ecole Superieure de Biotechnologie de Strasbourg -
RL   UMR7100, Boulevard Sebastien Brant, Illkirch-Graffenstaden F-67400, France
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FH   Key             Location/Qualifiers
FH
FT   source          1..496
FT                   /organism="Gibberella pulicaris"
FT                   /isolate="10"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:5128"
FT   mRNA            join(<1..283,338..>496)
FT                   /gene="Cbh-C"
FT                   /product="Cbh-C"
FT   CDS             join(<1..283,338..>496)
FT                   /codon_start=2
FT                   /gene="Cbh-C"
FT                   /product="Cbh-C"
FT                   /note="similar to Fusarium oxysporum GuxC presented in
FT                   SwissProt Accession Number P46238"
FT                   /db_xref="GOA:Q8J145"
FT                   /db_xref="HSSP:1GPI"
FT                   /db_xref="InterPro:IPR001722"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="UniProtKB/TrEMBL:Q8J145"
FT                   /protein_id="AAN07159.1"
FT                   /translation="VDTTKKVTVVTQFHKGSNGRLSEITRLYVQNGKVIANSESKIAGV
FT                   PGSSLTPEFCTAQKKVFGDTDDFAKKGAWSGMSDALEAPMVLVMSLWHDHHSNMLWLDS
FT                   TYPTDSTKLGAQRGSCSTSSGVPADLEKNVPNSKVAFFNIKFG"
XX
SQ   Sequence 496 BP; 114 A; 152 C; 110 G; 120 T; 0 other;
     cgtcgacacc accaagaagg ttactgtcgt cacccagttc cacaagggca gcaacggccg        60
     tctctctgag attactcgtc tctacgtcca gaacggcaag gtcatcgcca actctgagtc       120
     caagatcgct ggagttcccg gaagctctct cacccctgaa ttctgcactg cccagaagaa       180
     ggtctttggc gacaccgatg actttgcgaa gaagggtgct tggagcggta tgagcgatgc       240
     tcttgaggct cccatggttc ttgttatgtc tctctggcac gatgtaagtg ctaccaaact       300
     ccaaattcac catgtaacat gatactgacc tatacagcac cactccaaca tgctctggct       360
     cgactctacc taccccactg actctactaa gctcggtgct cagcgaggat cttgctccac       420
     atcctctggt gtgcctgccg accttgagaa gaacgttccc aactccaagg ttgccttctt       480
     caacatcaag ttcggt                                                       496
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