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EBI DbfetchID AF461795; SV 1; linear; genomic DNA; STD; PRO; 6444 BP. XX AC AF461795; XX DT 22-JAN-2002 (Rel. 70, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Bartonella henselae Omp89 (omp89), LpxD (lpxD), FabZ (fabZ), and LpxA DE (lpxA) genes, complete cds; and unknown genes. XX KW . XX OS Bartonella henselae OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; OC Bartonella. XX RN [1] RP 1-6444 RA Zimmermann R., Augustin K., Schaal K., Sander A.; RT "Cloning, nucleotide sequencing, and expression of a hemin-binding protein RT of Bartonella henselae"; RL Unpublished. XX RN [2] RP 1-6444 RA Zimmermann R., Augustin K., Schaal K., Sander A.; RT ; RL Submitted (20-DEC-2001) to the EMBL/GenBank/DDBJ databases. RL Institute of Med. Microbiology and Hygiene, Herman-Herder-Str. 11, Freiburg RL D-79104, Germany XX FH Key Location/Qualifiers FH FT source 1..6444 FT /organism="Bartonella henselae" FT /mol_type="genomic DNA" FT /db_xref="taxon:38323" FT CDS 53..1129 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF1" FT /db_xref="GOA:Q8VQ25" FT /db_xref="InterPro:IPR001478" FT /db_xref="InterPro:IPR004387" FT /db_xref="InterPro:IPR008915" FT /db_xref="UniProtKB/Swiss-Prot:Q8VQ25" FT /protein_id="AAL66373.1" FT /translation="MIIIFVHEAGHYLIGRWCGIKASVFSLGFGPQIVGYTDKRGTQWR FT LALIPLGGYVKFIGDEEGLHGTSSQSLPIVDGSFGSAHAWKKAATVFAGPLFNVLFTVV FT ILTFFFFTYGRVAIEPVVGSFVKDSPAVQAGLQLGDRFIEMDGQQVESFEDLMNYVTFH FT GGDPIEFKMERSGQVFTTVITPKVVERDDGFGNRVRSGLMGVGVPVDPDNPARLDPAYV FT KHIRYSFGRALREASKRATFIVTQTVFFMGRLLGGKEDHCRLSGPSKTVKIAWQVSETG FT FLSLLNFTAFLSIGVGLINLFPIPPLDGGYLLFHVVEIISGRPISAKIREIIFRLGLCF FT VLLFMFFALFNDYFCWFS" FT misc_binding 1100..1117 FT /gene="omp89" FT /bound_moiety="Fur" FT /note="putative Fur-box" FT CDS 1335..3731 FT /codon_start=1 FT /transl_table=11 FT /gene="omp89" FT /product="Omp89" FT /note="hemin-binding ability; similar to Haemophilus FT influenzae bacterial surface antigen AG15" FT /db_xref="GOA:Q8VQ24" FT /db_xref="InterPro:IPR000184" FT /db_xref="InterPro:IPR010827" FT /db_xref="InterPro:IPR016474" FT /db_xref="UniProtKB/TrEMBL:Q8VQ24" FT /protein_id="AAL66374.1" FT /translation="MTMNSRFLNAASVLVLGMRVIAPTTAFVSIAMVEEVQASVVRSIE FT VHGNKFVSAQVVRDNIDIKVGKSFSSGDVDFAVKRLFALGLFYDVKINQVGDRLVVLVK FT EYEVVNQVLFQGNKSLKDPDLKRFISLKPNEPFNSAKLSADVNVIREAYKTVGRNDIAV FT TIQTINLGKGRVNVVFNIVEGRRTKISNITFKGNHAFGSSRLRDVISTKPSGILSLLLR FT GDVYSEERLAADEEALRRFYYNRGYADFRVISSKAVFDEARNAYEIDFVLDEGVRYKIG FT DVQIESDIDGIDVQSMKGILKTRSGDVYSAENIEQSVAIINNKAADSGYAFAKVEPRGN FT RDLANHTISILYNIEQGPRAYVQRIEIRGNEKTRDYVIRREIDLNEGDAYNQTLVQRAK FT RRLESLGFFKAVNISMVPTDQPDQIILVVDVLEAPTGDLSFSGGYTTGGTSPGVSLEVS FT VTERNLGGRGQYVRLGLGAGQEKSRNYNLSFVDPYFLGYRLSAGVDIFRSTYRADKAYD FT VRQTGGSLRFAVPINDQLSANLAYSYIQEEYDFGKKYDLSKETDIRELYGKYSGAIVQA FT AQHSPWKRSSISYGLTYNTIDDMKNPHDGWYVRVLQEYAGLGGNAKFLKTTGKAMMYKT FT LSDRMDLVGLLSFGGGYIHEIGREGVRIFDMFKINTDMIRGFKYNGIGPRQVSNKGEVY FT FLGGTTYMNATAEVQFPIPVVPEGLGFRGALFADVATLYGSNYKPVFQGETPVTNIKSA FT WRSSAGVSLMWDSPFGPLRFDYAWPIKKQEGDRLQQLNFGISTKF" FT CDS 3798..4844 FT /codon_start=1 FT /transl_table=11 FT /gene="lpxD" FT /product="LpxD" FT /function="putative involvement in lipid A biosynthesis" FT /db_xref="GOA:Q8VQ23" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR007691" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR020573" FT /db_xref="UniProtKB/Swiss-Prot:Q8VQ23" FT /protein_id="AAL66375.1" FT /translation="MADTFFFTPSRRLTVANVAELTGAKLLNPEFSNTVINTLSSLESA FT GKGSLVFVEHRKFSDALVGSSAVAVFCTNEIVFKVPESMAILVTSTPQRDFAQIGRILF FT PDSVKPMPWFGQREISPHAHIHPSAKLAGDVCIEAGAVIGRNVEIGSGSLIASTAVIGE FT NCRIGCDCYIAPKVTVQYSLIGDKVHLYPGACIGQDGFGYIGGASGIEKVPQLGRVIIE FT DGVEIGANTTIDRGTFEDTIIGEGSKIDNLVQIAHNVKIGRYCLIAAQCGIAGSTSIGD FT MSQLGGSVGVADHIVIGKYVQIAAGSGVMNDIPDGEKWGGSPARPFKQWFREVAALRSI FT GKVKKEKR" FT CDS 4846..5313 FT /codon_start=1 FT /transl_table=11 FT /gene="fabZ" FT /product="FabZ" FT /function="putative involvement in fatty acid elongation" FT /db_xref="GOA:Q8VQ22" FT /db_xref="InterPro:IPR010084" FT /db_xref="InterPro:IPR013114" FT /db_xref="UniProtKB/Swiss-Prot:Q8VQ22" FT /protein_id="AAL66376.1" FT /translation="MITTEGTRSLETLDIEKLLSILPHRYPFLLIDRIVEIDGEQEAIG FT IKNITINEPHFVGHFPAKPVMPGVLILEAMAQTAGAISLLRLGNKQTNLVYLMTVDNAK FT FRKPVIPGDQLKIHVRLLKKRSGMRRFSCIAEVKGVRVAEAEIAAMILEKE" FT CDS 5337..6161 FT /codon_start=1 FT /transl_table=11 FT /gene="lpxA" FT /product="LpxA" FT /function="putative involvement lipid A biosynthesis" FT /db_xref="GOA:Q8VQ21" FT /db_xref="HSSP:1LXA" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR010137" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/Swiss-Prot:Q8VQ21" FT /protein_id="AAL66377.1" FT /translation="MSGTKIHPTALVEKGAQLGENVFVGPFCHISSEAVIGDGCSLMSH FT VVIMGKTTLGADSKVFSHAILGAEPQDNKHKGGYTTLSIGKNCTIREGVTMHRGSDSSV FT GMTIVGDNCQFFCYAHIAHDCRVGNNVTFANNVMIAGHVTVGDYVIIGGGAAVHQFVRV FT GHHAFIGGVSALVGDLIPYGTAVGVQAKLAGLNIIGMKRAGLERKDIHALRHAVAMLFD FT HSKPFKERVSDVASFYPASQSVVDVVNFIKEKGKRFYCTPKFEGDRIKENKD" FT CDS 6164..>6444 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF6" FT /db_xref="InterPro:IPR010415" FT /db_xref="UniProtKB/TrEMBL:Q8VQ20" FT /protein_id="AAL66378.1" FT /translation="MSVSGARNFLSGRTAIIAGNGVLPITIAQELEKNGQNPFLVLLRD FT EADALLYRYEHCELSIVELARLVKILKAAEICNIVLAGGVKRRPLLKQ" XX SQ Sequence 6444 BP; 1732 A; 972 C; 1583 G; 2157 T; 0 other; aattgctttg ggcgacgtac ttttgagaag tttgagcgtt ctttttgtca ttatgattat 60 catttttgtt cacgaagctg ggcattatct cattgggcgg tggtgtggta ttaaggcatc 120 ggttttttcg cttgggtttg gaccacaaat agtgggttac acagataagc gtggtacaca 180 atggcgttta gcacttattc ctttgggagg atacgtaaag tttatagggg atgaagaagg 240 attgcatgga acatcttctc aatcacttcc gattgttgac ggttcatttg gtagtgcgca 300 tgcttggaaa aaagcagcga ctgtttttgc tggtcccttg ttcaacgttc tttttaccgt 360 tgttatttta acgttttttt tctttacata tggtcgtgta gccattgaac cagttgttgg 420 ttctttcgta aaagattctc ctgctgttca ggccggtttg caattaggcg accgttttat 480 tgagatggat ggtcaacagg ttgaaagttt tgaagatttg atgaactatg tgacgtttca 540 tggtggagat cctatagaat ttaaaatgga acgtagtggg caggtattta cgacggtgat 600 tacaccaaaa gtagttgaac gagatgatgg atttggtaat cgggttcgaa gtggactgat 660 gggtgtagga gttcctgttg atccagataa tcctgcgcgt ttagatccag cttatgtaaa 720 acatattcgc tatagttttg gcagagcttt gagagaggca tcaaaacgtg ctacgtttat 780 tgttacccaa acagtttttt ttatggggcg tttactcggt gggaaagaag atcattgtcg 840 gctaagtggt ccttctaaga cggttaaaat tgcttggcaa gtgagtgaaa caggttttct 900 ctctttattg aattttacag cttttctttc gataggtgtt ggacttatta atctttttcc 960 aattcctcca cttgatggtg ggtatttgtt atttcatgtt gttgaaatca tttctgggag 1020 gccaatatca gctaaaattc gggagattat ttttcgctta ggcctctgct ttgttcttct 1080 atttatgttt tttgcgcttt ttaatgatta tttttgttgg tttagctaat taaattatgg 1140 aaaacatttt ataaattagg taatagtaga aaaatacaac tgaaaagtcg tttaccatat 1200 ccacaaaata ttgtggcatc atgcgctata atgagtaatt aaggggtgag aagtctcgct 1260 gtgtaaaaga attgttatgg cagttagctt tttgaggcgt tgtgttcagg gaataagata 1320 aggtacaaaa gccaatgact atgaattcaa ggtttttaaa tgcagcatct gtgttggtgt 1380 tagggatgag ggttattgcc ccaacaacag cctttgtatc aattgctatg gttgaagaag 1440 tgcaagcatc tgtggttcgt tccattgagg ttcatggaaa taaatttgta agtgctcagg 1500 tggttcgaga taatatagac attaaagttg gaaagagttt ttccagtggt gatgttgatt 1560 ttgcggtaaa gcgtcttttt gcgttagggt tattttatga tgttaaaata aaccaggtag 1620 gcgataggct ggttgtgctg gtcaaagagt atgaagtcgt taatcaggtg ttatttcaag 1680 gaaataaatc tcttaaagat cctgatctta aacggtttat ttctttaaaa cccaatgagc 1740 ccttcaattc tgccaagctt tcagctgatg ttaatgtgat tcgtgaagct tataaaactg 1800 ttggtcgtaa tgatatcgct gttacgattc aaactattaa tcttggaaaa gggcgcgtaa 1860 atgtggtctt taatattgtt gaaggtcgca ggacaaagat tagcaatatc acttttaagg 1920 ggaatcacgc ttttgggagt agccgtttac gtgatgtgat ttcaacaaag ccttcaggaa 1980 tactttcgtt attgttgaga ggtgatgttt atagtgagga acgcttggct gctgatgaag 2040 aagcgctccg tcgtttttac tataaccgtg gttatgcaga ttttcgcgtt atttcctcta 2100 aagcagtttt tgatgaagcg cgtaatgctt atgaaattga tttcgttctc gatgaaggtg 2160 tgcgctataa aattggtgat gttcagattg aaagtgatat cgatgggatt gatgttcaat 2220 ctatgaaagg aatacttaaa acccgttccg gtgatgttta tagtgcagaa aatattgaac 2280 agtctgttgc aattattaac aataaagctg ctgattcggg atatgctttt gctaaagttg 2340 aaccacgagg aaatcgtgat ttggcaaatc atacaatttc cattttgtat aacattgaac 2400 aaggtcctcg ggcttatgtt cagcgtattg aaatacgtgg taatgaaaag acacgtgatt 2460 atgttattcg ccgtgagatt gatctaaatg aaggtgatgc ttacaatcag accttagtgc 2520 agcgagcaaa acgtcgtcta gagagtttag gcttttttaa agccgttaat atttcaatgg 2580 ttcccaccga tcaacctgat cagattatct tggttgtaga tgtacttgaa gcaccaacgg 2640 gagatctttc tttttctgga gggtatacaa cgggtggtac aagtcctggt gtgtcacttg 2700 aggtatctgt taccgagcgt aatcttggag ggcgtggtca gtatgttcgt ttaggcttag 2760 gtgctggaca agagaaatcc cgtaattaca atttatcgtt tgttgatcct tatttcttag 2820 gttatcgttt atctgctggg gttgatattt ttcgcagtac ttaccgcgct gataaagcat 2880 atgatgtacg acagacgggt ggatcacttc ggtttgcggt acctattaat gaccagttat 2940 ctgctaattt agcttattct tatatacagg aagaatatga tttcggtaaa aaatatgact 3000 taagtaaaga gactgatata agagaattat atgggaaata ttctggtgca attgttcaag 3060 ctgcacagca tagtccctgg aaacgttcat caattagtta tggtctaacc tataatacta 3120 ttgatgatat gaagaatccg catgatgggt ggtatgtgcg tgttcttcag gaatatgcag 3180 ggcttggcgg caatgcaaag ttcttgaaga caactggtaa agcaatgatg tataaaacgc 3240 tttctgatcg gatggatctt gtcggtttac tttcttttgg tggtggttat attcacgaaa 3300 taggccgaga aggagttcgt atcttcgata tgtttaaaat aaatactgat atgatccgtg 3360 gcttcaaata taacggaata ggtccgcgtc aggtatccaa taaaggtgaa gtttatttct 3420 tagggggaac gacgtatatg aacgcgactg ctgaagtaca gtttcccata cctgttgtgc 3480 ctgaagggtt aggatttcgt ggtgcattat ttgcggatgt tgcaacgctt tatggtagta 3540 actataaacc tgtttttcag ggtgaaacgc ctgttacaaa tatcaaaagt gcatggcgtt 3600 cgtccgcagg tgttagtttg atgtgggatt cgccgtttgg tccgctgcgt tttgattatg 3660 cgtggccaat aaaaaagcaa gaaggggatc gtttgcagca attgaacttt ggtatttcta 3720 cgaagttctg atttaaattt tctttagaag aaaaaaataa agagaatggg gtataggctg 3780 ggagagaaag tgttttgatg gcggatacat ttttttttac gccgtcccgg cgattgacgg 3840 ttgctaatgt tgctgagttg acaggtgcaa aacttcttaa tccagagttt tctaacacag 3900 ttataaatac tctttcttcg cttgagagtg ctggaaaagg ttctcttgta tttgtggagc 3960 atcggaagtt ttctgatgct ttagtaggaa gttctgctgt tgctgttttt tgtacaaatg 4020 aaatcgtttt taaagttcct gaatctatgg caattttggt gacgtccaca ccacagcgtg 4080 attttgccca gattggtcgc atcttatttc ccgattctgt taaaccaatg ccttggtttg 4140 gacagagaga gatctctccg catgcgcata ttcatccaag tgctaagctt gcaggtgatg 4200 tatgtattga ggcgggagct gttattggga gaaatgttga gattggttca ggatctctta 4260 ttgcatctac tgctgttatc ggtgaaaact gccgtattgg gtgtgactgc tatattgctc 4320 ctaaggtaac agttcagtat tctttgatag gcgacaaagt tcatctttat cctggtgcct 4380 gcattgggca agacggtttt ggttatatcg gtggtgcttc tggaattgag aaagtcccac 4440 aacttggtcg tgttattatt gaggatggtg tagaaattgg tgctaatacg acaattgatc 4500 gtggaacatt tgaggatacc attattggtg aaggaagcaa aattgataat ttagtgcaga 4560 ttgctcataa tgtgaagatt ggtcgttatt gtcttattgc cgctcaatgt ggaattgctg 4620 gaagtacatc cataggtgat atgtctcagc ttggtgggag tgttggggta gcagatcata 4680 tcgtcatagg taaatatgtt cagattgctg ctggtagtgg tgttatgaat gacattccgg 4740 atggtgaaaa atggggaggt agtcctgcac gaccatttaa acaatggttc cgtgaagtag 4800 cggctttgcg tagtattggc aaagttaaaa aggagaaacg ctaatatgat caccaccgaa 4860 ggaactagaa gtttagagac tttagatatt gaaaaattgc tttcaatatt accgcatcgt 4920 tatccgtttt tattgatcga taggattgtt gaaattgatg gtgagcaaga agctattggt 4980 attaaaaata taaccattaa tgagccgcat tttgtggggc attttcctgc aaaacctgtc 5040 atgcctggcg tgttgatttt ggaagctatg gcacaaacag caggagcaat ttcactttta 5100 agattaggga ataagcaaac aaatttggtt tatttaatga ctgttgataa tgcgaagttt 5160 cgtaagccag ttatacctgg tgatcagcta aagatccatg ttcggctttt aaaaaagcga 5220 tctggcatga ggcgtttttc gtgtattgca gaagtaaagg gtgtccgtgt tgctgaagcg 5280 gaaattgctg cgatgattct cgagaaagag taaacgatat tgatgggaat ttaaaaatgt 5340 ccggtacgaa aatccatcca actgctcttg tggagaaggg agcgcagctt ggtgagaatg 5400 tattcgttgg gccgttttgt catattagtt cagaggctgt tattggtgat ggatgcagct 5460 tgatgagtca tgttgtgata atggggaaaa caacgttagg agccgatagt aaagtatttt 5520 cacatgcaat tttgggagca gaaccgcaag ataataaaca taagggaggt tatacaactc 5580 tctctattgg taaaaattgt acaattcgtg aaggcgtaac aatgcataga ggctctgatt 5640 cgagtgtggg aatgacaatt gtgggtgata attgccaatt tttttgttat gcccatatcg 5700 ctcacgattg ccgtgtgggg aataatgtaa catttgcaaa taatgtgatg atcgctgggc 5760 atgttactgt tggcgattat gttattattg gtggtggtgc tgctgttcac caatttgttc 5820 gtgttggtca tcatgcattt attggtggtg tatcggcact ggttggcgat ttaattccct 5880 atggaacagc tgttggtgtg caggcaaaac ttgcagggtt aaatattatt ggtatgaaac 5940 gcgcaggtct tgagcgtaaa gatattcatg cattacgcca tgcggttgct atgctttttg 6000 atcacagtaa gccgtttaaa gagcgtgtca gcgatgttgc ttctttctat cccgcttctc 6060 agtctgttgt tgatgtagtt aattttatta aagaaaaagg aaaacgtttt tattgtactc 6120 ccaaatttga aggtgataga ataaaagaaa ataaggatta aaaatgtctg tctctggtgc 6180 gagaaatttt ctttccggcc gtactgctat tatagcagga aatggtgttc tacctatcac 6240 tattgctcaa gaacttgaaa aaaatgggca gaatcctttt cttgtacttt tgcgtgatga 6300 agcagatgct ttgctttatc gctatgaaca ttgtgagtta tcaattgtag agttagcgcg 6360 tctcgttaaa atcttaaagg cagctgagat ttgtaatatt gttttggccg gtggtgtgaa 6420 aaggcggcca cttcttaagc aatt 6444 // |
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