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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF452100; SV 1; linear; mRNA; STD; ROD; 1145 BP.
XX
AC   AF452100;
XX
DT   22-JAN-2002 (Rel. 70, Created)
DT   23-SEP-2008 (Rel. 97, Last updated, Version 3)
XX
DE   Rattus norvegicus peroxisomal thioesterase 1 mRNA, complete cds.
XX
KW   .
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
XX
RN   [1]
RP   1-1145
RA   Ofman R., el Mrabet L., Wanders R.J.A.;
RT   "Demonstration of dimethylnonaoyl-CoA thioesterase activity in peroxisomes
RT   and identification of PTE1 as the enzyme involved";
RL   Unpublished.
XX
RN   [2]
RP   1-1145
RA   Ofman R., el Mrabet L., Wanders R.J.A.;
RT   ;
RL   Submitted (22-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL   Dept. of Clinical Chemistry and Div. Emma Children's Hospital, University
RL   of Amsterdam Academic Medical Centre, Meibergdreef 9, Amsterdam 1105 Az, NL
XX
DR   ASTD; TRAN00000025427.
DR   Ensembl-Gn; ENSRNOG00000015187; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000020740; Rattus_norvegicus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1145
FT                   /organism="Rattus norvegicus"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:10116"
FT   CDS             43..1005
FT                   /codon_start=1
FT                   /product="peroxisomal thioesterase 1"
FT                   /note="pTE1"
FT                   /db_xref="GOA:Q8VHK0"
FT                   /db_xref="InterPro:IPR003703"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8VHK0"
FT                   /protein_id="AAL66289.1"
FT                   /translation="MSKPEDLGDANGDADRGDLSGDLRSVLVTSVLNLEPLDEDLYRGR
FT                   HYWVPTSQRLFGGQIVGQALVAAAKSVSEDVHVHSLHCYFVRAGDPKVPVLYHVERTRT
FT                   GASFSVRAVKAVQHGKAIFICQASFQQMQPSPLQHQFSMPTVPPPEELLDHEALIDQYL
FT                   RDPNLHEKYRVGLNRIAAREVPIEIKLVNPPALNQLQTLEPKQMFWVRARGYIGEGDIK
FT                   MHCCVAAYISDYAFLGTALLPHQSKYKVNFMVSLDHSMWFHAPFRADHWMLYECESPWA
FT                   GGSRGLVHGRLWRRDGVLAVTCAQEGVIRSKPRVSESKL"
XX
SQ   Sequence 1145 BP; 250 A; 318 C; 329 G; 248 T; 0 other;
     gataagtttc cgcgtttctc tcatctgcag caagcagtga aaatgtcaaa gccagaggac        60
     ctaggagatg ctaatggcga cgccgaccgc ggcgaccttt ccggggacct gcgtagtgtg       120
     ctggtcacca gcgtgctcaa cctcgagcct ctagatgaag atctctacag aggaaggcat       180
     tactgggtac ctacctccca gcggctcttt gggggtcaga ttgtgggcca ggctctggtg       240
     gctgcagcca agtccgtgag tgaagacgtc cacgtgcact ccctgcactg ctactttgtc       300
     cgggcagggg acccaaaggt gccagtgctg taccatgtgg agaggacacg aacaggagca       360
     agcttctcag tgcgtgcagt gaaggctgtg cagcatggca aggccatctt catctgccag       420
     gcctccttcc agcagatgca gcccagcccc ctgcagcacc agttctccat gcccactgtg       480
     ccccccccag aggagctgct ggaccatgag gcccttattg accagtactt aagggatcct       540
     aaccttcatg agaaatatcg agtggggctg aaccgaattg ctgcccgaga ggtgcctatt       600
     gagatcaagc tggtgaaccc acccgccctg aaccagctgc agacactgga gcccaaacag       660
     atgttctggg tgcgagcccg gggctatatt ggggaaggcg acatcaagat gcactgctgt       720
     gtggctgctt acatctctga ctacgccttc ctggggacgg cactgctgcc tcaccagtcc       780
     aagtataaag tgaacttcat ggtctcgctg gaccactcca tgtggttcca cgccccattc       840
     cgtgctgacc actggatgct ctacgagtgt gagagcccct gggctggtgg ctctcgaggg       900
     ctggtacatg ggcggctgtg gcgtcgggat ggggtccttg ctgtgacctg tgcccaggag       960
     ggtgtgatcc gatcgaagcc tcgggtatcc gagagtaaac tatagttgga gattaactcg      1020
     ctcgcctggg gctctaagga ctctttctgc tgccattcct ttggcagagg tcacagttga      1080
     gctgggcttc ctgcctctta catccaataa agagattgct aacactggaa aaaaaaaaaa      1140
     aaaaa                                                                  1145
//
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