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EBI DbfetchID AF450326; SV 1; linear; genomic DNA; STD; PRO; 6720 BP. XX AC AF450326; XX DT 19-DEC-2001 (Rel. 70, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Azospirillum brasilense chemotaxis gene cluster, complete sequence. XX KW . XX OS Azospirillum brasilense OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Rhodospirillaceae; Azospirillum. XX RN [1] RP 1-6720 RX PUBMED; 11934495. RA Hauwaerts D., Alexandre G., Das S.K., Vanderleyden J., Zhulin I.B.; RT "A major chemotaxis gene cluster in Azospirillum brasilense and RT relationships between chemotaxis operons in alpha-proteobacteria"; RL FEMS Microbiol. Lett. 208(1):61-67(2002). XX RN [2] RP 1-6720 RA Hauwaerts D., Das S.K., Alexandre G.; RT ; RL Submitted (21-NOV-2001) to the EMBL/GenBank/DDBJ databases. RL School of Biology, Georgia Institute of Technology, 310 Ferst Drive, RL Atlanta, GA 30332-0230, USA XX DR StrainInfo; 30667; ATCC 29145. XX FH Key Location/Qualifiers FH FT source 1..6720 FT /organism="Azospirillum brasilense" FT /strain="ATCC 29145; Sp7" FT /mol_type="genomic DNA" FT /db_xref="taxon:192" FT CDS 241..3630 FT /codon_start=1 FT /transl_table=11 FT /gene="cheA" FT /product="chemotaxis histidine kinase" FT /note="CheA; hybrid; contains a response regulator domain" FT /db_xref="GOA:Q8VL11" FT /db_xref="HSSP:1I59" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR002545" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR004105" FT /db_xref="InterPro:IPR004254" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR008207" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q8VL11" FT /protein_id="AAL47021.1" FT /translation="MKPDSCFEFPVHTAGERAADAVIHAIGVIAGLIGASWVLAVTAGH FT ASATEMVSLAAYGAGLVGMLSASAAYNMSPPGRRKAVLRRLDHAMIYVMIAGSYTPFTL FT NRLDGAAGLALGIGVWVVALGGVALKLFASWRYERLGFVLYLGLGWAILSVAEPLWRSL FT SPVTLLLLAVGGIVYTVGAFIHTLDRLPYNIPVWHALVIVAAACHFAAVAREFLTETNE FT NLSVLDVELVRLEQNPNNPELLSNIFRLVHTIKGTCGFLGLPRLEKVAHASENVLGKFR FT DGELTINPEAVSLILQALDTIKSLLAVLEATEAEPPGDDLPLIERLNLCAEGKLGAAAA FT PAKPAAAPEPPPAPAVAAAEVAPASSGNLTLDELEAIWNATPGPTSTALAPVAAEPAEE FT PAPSHDLVVPDPDPVPAAAKMPAPAAEAASGAGAGGEAATKESAVAAQTIRVNVDLLEN FT LMTMVSELVLTRNQLLQILRSQKESEFAAPLQRLNHVTSELQEGVMKTRMQPIGNAWAK FT LPRLVRDLSHELGKKIDLQMLGADTELDRQVLELIKDPLTHMVRNSADHGLEVPADRVR FT AGKSETGRITLNAYHEGGHIIIEIQDDGKGLAIDRIKQKAIQNGMASEGELAAMSDQQI FT IQFIMKPGFSTAAKVTNVSGRGVGMDVVKTNIEKIGGTIEIKSQQGKGSTFVIKIPLTL FT AIVSALIVECAGERFAIPQISVVELVRAAADSEHTIERLKGTPVLRLRNRLLPLVSLQE FT LLRLDDQEGGEKKTDETFIVVTQVGTYTFGIMVDRVFDTEEIVVKPVAPILRHIEMFSG FT NTIFGDGSVIMILDPNGIASATGEMAMGETASKEATSVQATRQEDKMALLLFRAGAGAP FT KGVPLSLVARLEDVDLASVESSNGMPVVQYRGKLMPLVPIDPGFMIGQEGRQPVLVFAD FT GDRSMGLIVDEIVDIVEERLVEQLTADRPGLMGSAIIAGKATDVLDAGFFLTQAYKDWF FT GSSSTDAYEEERALQRVLLVDDSPFFRNLLTPLLSVAGYDVTAVENANEALALCEAGED FT FDVIVSDIEMPGMSGFDFAEAVRQGGTRWSGTPMVALSSHASPRDLDRGRQAGFTDYVA FT KFDRDALLYALQQTLSEQKGAA" FT CDS 3627..4127 FT /codon_start=1 FT /transl_table=11 FT /gene="cheW" FT /product="transducer coupling protein" FT /note="CheW; chemotaxis CheA" FT /db_xref="GOA:Q8VL10" FT /db_xref="InterPro:IPR002545" FT /db_xref="UniProtKB/TrEMBL:Q8VL10" FT /protein_id="AAL47022.1" FT /translation="MSNAKLPATTKKSKGDEITSGGSQDYVTMTIADQLFGIPVLQVQD FT VLGHQRITRIPLAPPEVAGSLNLRGRIVTAIDVRLRLGLTSRPKDKPGMSIVVDLRGEL FT YSLMVDSVGEVLSLSNDDFERNPATLDPRWREVSTGIYRLNGQLMVVLDVPRLLNFTTM FT EAA" FT CDS 4176..4541 FT /codon_start=1 FT /transl_table=11 FT /gene="cheY" FT /product="chemotaxis response regulator protein" FT /note="CheY" FT /db_xref="GOA:Q8VL09" FT /db_xref="HSSP:1JBE" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q8VL09" FT /protein_id="AAL47023.1" FT /translation="MKVCLVVDDSRVVRKVARKILEELHFACTEAEDGRQAMEACAQKM FT PDAILLDWNMPVMTGIEFLRRLRKMSGGDIPKVVFCTTENDLAHIQEALSAGANEYIMK FT PFDSDIIQTKFEQVGLL" FT CDS 4597..5781 FT /codon_start=1 FT /transl_table=11 FT /gene="cheB" FT /product="chemotaxis methylesterase" FT /note="CheB" FT /db_xref="GOA:Q8VL08" FT /db_xref="InterPro:IPR000673" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR008248" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/Swiss-Prot:Q8VL08" FT /protein_id="AAL47024.1" FT /translation="MSDGFGRPPPPAPAGHPTGAAGGDPVRVMVVDDSAVIRGLLTRAL FT EGDTEIRVVASVGDGQMAVNALQRNSLDVIVLDIEMPVMDGLTAIPKLLAVAPQVKIIM FT ASTLTLRGADISMRCLSAGAADYIPKPTSTREIGGADAFKRELVSKVKALGAAARRAGS FT RTRGELRPLNPVPAAFLKREPPPVTLRPAPAVGSVGQVKPDVIAIGSSTGGPQALFEVL FT AHLKTGVTQPILITQHMPATFTTILAEHITRQCGMNAQEAKDGEPVVPGRCYIAPGDFH FT MLVTQRAGANVISLTKDPPENFCRPAVDPMMRSILRAFGGRKVLACILTGMGQDGLKGC FT TEVVNAGGTLIAQDEASSVVWGMPGAVAQAGICSAVLPLKEIGPYIRKFASRAA" FT CDS 5778..6623 FT /codon_start=1 FT /transl_table=11 FT /gene="cheR" FT /product="chemotaxis methyltransferase" FT /note="CheR" FT /db_xref="GOA:Q8VL07" FT /db_xref="HSSP:1AF7" FT /db_xref="InterPro:IPR000780" FT /db_xref="UniProtKB/TrEMBL:Q8VL07" FT /protein_id="AAL47025.1" FT /translation="MRVEDFDMFSTLLKQRSGLVLTRDKAYLLESRLMPVARKWNMKGL FT EELASTVRTRKDEALLRDITEAMTTNESSFFRDQKPFDQFKQIVLPKLMEARSAKRSIR FT IWSAACSSGQEAYSLAMLLSEDAAKLAGWRIEIVGTDISAEMVERSKSGIYTQFEVQRG FT LPIQMLVKHFKQQGDKWQISLQLRQMASFREFNLLGDLSGLGQFDIVFCRNVLIYFDQP FT TKTKVLEAIARQMPQDGVLYLGGADTVLGITDPFKPVEGQRGLYSLGGFQVPSGLRAAV FT " XX SQ Sequence 6720 BP; 1100 A; 2260 C; 2283 G; 1077 T; 0 other; ggcgccggcg gcgaagctgg atagtctggt catgatcgtt ctgaaacgtg ttgtcgaacc 60 ggtccgtgga accgcgtcgg gctgcggacc atagcgctgc gacgcccggc ctgcccgcct 120 tttattgtcc gggagacaag tccattcgcc ccacccaacc ctgcggggtt aacgattccg 180 atggggtgga gtgccggggg agagctttcc atccgcccgc ctttccggca ggctggtccc 240 atgaaacccg attcctgctt cgagtttccc gtccacacgg cgggggagcg tgcggcggac 300 gcggtcatcc acgccatcgg cgtgatcgcc ggcctgatcg gcgcgtcctg ggtgttggcc 360 gtgacggcgg gccacgcctc cgcgaccgag atggtgtcgc tggcggccta cggcgccggg 420 ctggtcggca tgctgagcgc gtcggccgcc tacaacatgt ccccgccggg ccggcgcaag 480 gccgtgctgc ggcggcttga ccacgcgatg atctatgtga tgatcgccgg cagctacacc 540 cccttcaccc tgaaccggct ggacggcgcc gccgggctcg cgctggggat cggggtgtgg 600 gtggtggcgc tgggcggggt ggcgctgaag ctgttcgcct cgtggcggta cgaacggctt 660 ggcttcgtgc tttatctcgg gctcggctgg gccatcctgt cggtggccga accgctgtgg 720 cggtcgctgt ccccggtgac gctgcttctg ctggcggtgg gcgggattgt ctacacggtc 780 ggcgccttca tccacacgct cgaccgcctg ccctacaaca tcccggtctg gcacgcgctg 840 gtcatcgtgg cggccgcctg ccacttcgcc gcggtcgcgc gggaattcct gacggaaacc 900 aacgagaacc tgtcggttct cgacgtggaa ctggtccgtc tggagcagaa tcccaacaat 960 ccggaacttc tgtcgaacat cttccgtctg gtgcacacca tcaagggcac ctgcggcttc 1020 ctcggcctgc cgcgcctgga aaaggtcgcg cacgcttcgg aaaacgtgtt gggcaagttc 1080 cgcgatgggg aactgaccat caaccccgaa gcggtctcgc tgatccttca ggcgctggac 1140 accatcaaga gcctgctggc ggtgctggag gcgacggagg cggagccgcc gggcgacgac 1200 ctgccgctga tcgagcgcct gaacctgtgc gccgaaggca agctgggtgc tgccgctgcc 1260 ccggccaagc ccgccgcggc cccggagccc ccgccggccc ccgcggtggc ggcggcggag 1320 gtggctccgg cttcctcggg caatctcacg ctggacgagc ttgaggcgat ttggaacgcc 1380 acccccggcc cgaccagcac cgcgctggcc ccggtcgccg cggagccggc ggaagagccc 1440 gccccctcgc acgatctggt ggtcccggac cccgatccgg tccccgctgc cgccaagatg 1500 cccgctcccg ccgcggaggc cgcgtcgggc gccggtgcgg gcggcgaggc cgcgaccaag 1560 gaatcggcgg tcgccgcgca gaccatccgc gtcaacgtgg acctgctcga aaacctgatg 1620 accatggtgt ctgagctggt gctgacccgc aaccagctgc tccagatcct gcggtcgcag 1680 aaggagagcg agttcgccgc cccgctgcag cgcctgaatc acgtgacgtc ggagctgcag 1740 gaaggcgtca tgaagacgcg catgcagccc atcggcaacg cctgggccaa gctgccgcgt 1800 ctggtgcgcg acctgtcgca cgaactgggc aagaagatcg atctccagat gctcggcgcc 1860 gacaccgagc tggaccgcca ggtgctggag ttgatcaagg acccgctgac gcacatggtg 1920 cgcaactccg ccgaccacgg cctggaggtg cccgccgacc gtgtgcgcgc gggcaagtcg 1980 gagaccggcc gcatcacgct gaacgcctat cacgagggcg gccacatcat catcgagatc 2040 caggacgatg gtaagggcct ggcgatcgac cgcatcaagc agaaggcgat ccagaacggg 2100 atggcctcgg aaggcgagct ggcggcgatg tccgaccagc agatcatcca gttcatcatg 2160 aagcccggct tctcgaccgc ggcgaaggtt accaacgtgt cgggccgcgg cgtcggaatg 2220 gacgtggtca agaccaacat cgagaagatc ggcggcacga tcgagatcaa gtcccagcag 2280 ggcaagggct cgaccttcgt catcaagatc ccgctgacgc tggccatcgt ctccgccctg 2340 atcgtggagt gcgccggcga gcgcttcgcc atcccgcaga tcagcgtggt cgagctggtg 2400 cgcgccgccg ccgacagcga gcacaccatc gagcggctga agggcacgcc ggtcctgcgt 2460 ctgcgcaacc gcctgctgcc gctggtctcg ctgcaggagc tgctgcggct ggacgaccag 2520 gaaggcgggg agaagaagac cgacgagacc ttcatcgtgg tcacgcaggt cggcacctac 2580 accttcggca tcatggtcga ccgcgtgttc gacaccgagg aaatcgtggt gaagccggtg 2640 gcgccgatcc tgcgccacat cgaaatgttc tcgggcaaca ccatcttcgg cgacggctcg 2700 gtcatcatga tcctcgaccc gaacggcatc gcgtcggcga ccggcgagat ggccatgggc 2760 gagaccgcgt cgaaggaggc cacttccgtc caggcgaccc gccaggagga caagatggcc 2820 ctcctgctgt tccgcgccgg ggccggcgcg ccgaaggggg tgccgctgtc gctggtcgcc 2880 cgcctggagg atgtggacct cgccagcgtc gaatcgtcca acggcatgcc ggtggtccag 2940 taccgcggca agctgatgcc gctggtgccg atcgatccgg gcttcatgat cggccaggaa 3000 ggccgccagc cggtgttggt tttcgccgac ggcgaccggt cgatggggct gatcgtcgac 3060 gagatcgtcg acatcgtgga ggagcgtctg gtggagcagc tcaccgccga ccgtccgggc 3120 ctgatgggct cggcgatcat cgccggcaag gcgacggacg tgctcgacgc gggcttcttc 3180 ctgacccagg cctacaagga ttggttcggc tcgtcctcga ccgatgcgta cgaggaggag 3240 agggcgctcc agcgcgtgct gttggtcgac gacagcccct tcttccgcaa cctgctgacc 3300 ccgctgctgt cggtcgccgg ctacgacgtc accgccgtgg agaacgccaa cgaggcgctg 3360 gcgctgtgcg aggcgggcga ggacttcgac gtcatcgtct ccgacatcga gatgccgggg 3420 atgagcggct tcgacttcgc cgaggcggtc cgccagggcg gcacccgctg gagcggcacg 3480 ccgatggtcg ccctgtccag ccacgcttcc ccgcgcgacc tcgaccgcgg ccgtcaggcc 3540 gggttcaccg attatgtcgc caagttcgac cgtgacgctc tgctgtacgc gctgcagcag 3600 accctgtccg agcagaaagg tgccgcatga gcaacgccaa gctgcccgcc accaccaaga 3660 agtccaaggg tgacgagatc acctccggtg gcagccagga ctatgtgacc atgacgatcg 3720 ccgaccagct gttcggcatc ccggtcctgc aggtccagga cgtgctgggg caccagcgga 3780 tcacccgcat ccccctggcc ccgccggagg tcgccggctc gctgaacctg cgcgggcgca 3840 tcgtcaccgc catcgacgtg cgcctgcggc tcggcctgac gtcgcgcccc aaggacaagc 3900 cgggcatgtc catcgtggtg gacctgcgcg gcgaactcta cagcctgatg gtcgattcgg 3960 tgggggaggt gctgagcctc tccaacgatg acttcgagcg caacccggcc accctcgacc 4020 cgcgctggcg cgaggtgtcc acgggcatct atcgcctgaa cggtcagctc atggtggtcc 4080 tggacgtgcc gcgtctgctg aacttcacca cgatggaagc ggcctgaggc gaaaccccgg 4140 tcggtgtgca aagcgaagcc tgaggcccgt tcaccatgaa agtttgtctg gtcgtcgacg 4200 acagccgcgt ggtccgcaag gtcgcgcgga agatcctgga agagctgcac ttcgcctgca 4260 ccgaggcgga ggacggcagg caggccatgg aagcctgcgc gcagaagatg ccggacgcca 4320 tcctgctgga ctggaacatg ccggtgatga ccggcatcga gttcctgcgc cgcctgcgca 4380 agatgagcgg cggggacatt cccaaggtcg tcttctgcac gacggagaac gacctcgccc 4440 acatccagga ggcgctgtcc gccggggcga acgagtacat catgaagccg ttcgacagcg 4500 acatcatcca gaccaagttc gagcaggtcg ggctgctgtg acgggcggga ccaccgcacc 4560 gcgcaccgtt ccgaccctga aaggtctgat tgcgttatgt ccgatggttt cggcagacct 4620 cctccccccg cgccggcggg gcatccgacc ggtgcggccg gcggcgatcc cgtccgggtg 4680 atggtggtcg acgattccgc cgtcattcgt ggccttctga cccgcgcgct ggaaggcgat 4740 accgaaatcc gcgtggttgc gtcggtcggc gacggccaga tggcggtcaa cgctctgcag 4800 cgcaactcgc ttgacgtcat cgttctcgac atcgagatgc cggtgatgga cgggctgacg 4860 gccattccga agctgctggc ggtggcgccg caggtgaaga tcatcatggc ctccacgctg 4920 acgctgcgcg gggccgacat ctccatgcgc tgcctgtccg cgggggccgc cgactacatc 4980 cccaagccga cctccacccg tgagatcggc ggagcggacg ccttcaagcg cgagctggtg 5040 tcgaaggtca aggcgctggg cgccgcggcc cgccgcgccg ggtcccgcac ccgcggcgag 5100 ctgcgcccgc tgaatccggt gcccgccgcc ttcctgaagc gcgagccgcc gcccgtcacg 5160 ttgcgcccgg cgcccgccgt cggctccgtc ggccaggtca agccggacgt gatcgccatc 5220 ggcagctcca cgggcggccc gcaggcgctg ttcgaggtgc tggcccattt gaagaccggc 5280 gtcacccagc cgatcctgat cacccagcac atgccggcga ccttcaccac catcctggcc 5340 gagcacatca cccgccagtg cgggatgaac gcccaggagg cgaaggacgg cgagccggtc 5400 gtgccggggc gttgctacat cgcgccgggc gacttccaca tgctggtgac ccagcgcgcg 5460 ggcgccaacg tgatttcgct gaccaaggac ccgcccgaaa atttctgccg cccggcggtt 5520 gacccgatga tgcggtccat cctccgtgcc ttcggcgggc gcaaggtcct ggcctgcatc 5580 ctgaccggca tggggcagga cgggctgaag ggctgcaccg aggtggtgaa cgccggcggc 5640 accctgatcg cgcaggacga ggcgtccagc gtcgtgtggg gcatgccggg cgccgtcgcc 5700 caggcgggca tctgctccgc ggtgctgccg ctcaaggaaa tcggtcccta catccgcaag 5760 ttcgcatcga gggcagcatg agagtcgaag atttcgacat gttctccacg ctgctcaagc 5820 agcgttccgg cttggttctg acccgggaca aggcctacct gctcgaatcc cggctgatgc 5880 cggtggcgcg caagtggaac atgaaggggc tggaggaact ggcttccacc gtgcggacgc 5940 gcaaggacga agcgttgctg cgcgacatca cggaggcgat gaccaccaac gagtcgtcct 6000 tcttccgcga ccagaagccc ttcgaccagt tcaagcagat cgtcctgccg aagctgatgg 6060 aggcgcggtc ggcgaagcgg tcgatccgca tctggtcggc ggcctgctcg tccgggcagg 6120 aggcctactc gctggccatg ctgctgagcg aggacgcggc gaagctggcc ggctggcgga 6180 tcgagatcgt cggcaccgac atctccgcgg agatggtgga gcgctccaag tcgggcatct 6240 acacccagtt cgaggtgcag cgcggcctgc cgattcaaat gctggtgaag catttcaagc 6300 agcagggcga caagtggcag atcagcctgc agcttcgcca gatggcctcc ttccgcgaat 6360 tcaacctgct gggcgacctg tcagggctcg ggcagttcga catcgtgttc tgccgcaatg 6420 tgctgatcta tttcgaccag ccgaccaaga ccaaggtgct ggaggcgatc gcccgccaga 6480 tgccgcagga cggcgtgctc tatctgggcg gtgcggacac cgtgctgggc atcaccgacc 6540 cgttcaagcc ggtggagggc cagcgcggcc tctacagcct gggcggcttc caggtgccga 6600 gcgggctccg ggcggccgtc taaccaggac cgtctgatta cggcggtgtg acggtgaggc 6660 ggtccgccgg cccccttctc catgatcagc ggcggaaccc ggcgaccttt gggcccggtc 6720 // |
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