EBI Dbfetch

ID   AF442517; SV 1; linear; genomic DNA; STD; PRO; 1594 BP.
XX
AC   AF442517;
XX
DT   12-FEB-2002 (Rel. 70, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Magnetospirillum magnetotacticum ribulose-1,5-bisphosphate
DE   carboxylase/oxygenase form II (cbbM) gene, complete cds.
XX
KW   .
XX
OS   Magnetospirillum magnetotacticum
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC   Rhodospirillaceae; Magnetospirillum.
XX
RN   [1]
RP   1-1594
RX   DOI; 10.1007/s00203-004-0716-y
RX   PUBMED; 15338111.
RA   Bazylinski D.A., Dean A.J., Williams T.J., Long L.K., Middleton S.L.,
RA   Dubbels B.L.;
RT   "Chemolithoautotrophy in the marine, magnetotactic bacterial strains MV-1
RT   and MV-2";
RL   Arch. Microbiol. 182(5):373-387(2004).
XX
RN   [2]
RP   1-1594
RA   Dubbels B.L., Bazylinski D.A.;
RT   ;
RL   Submitted (01-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL   Microbiology, Iowa State University, 207 Science I, Ames, IA 50011, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1594
FT                   /organism="Magnetospirillum magnetotacticum"
FT                   /strain="MS-1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:188"
FT   gene            88..1467
FT                   /gene="cbbM"
FT   CDS             88..1467
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="cbbM"
FT                   /product="ribulose-1,5-bisphosphate carboxylase/oxygenase
FT                   form II"
FT                   /function="CO2 fixation in Calvin-Benson-Bassham cycle"
FT                   /note="RubisCO"
FT                   /db_xref="GOA:Q8RTI2"
FT                   /db_xref="HSSP:1RBA"
FT                   /db_xref="InterPro:IPR017444"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8RTI2"
FT                   /protein_id="AAL76920.1"
FT                   /translation="MDQSKRYVNLALSEADLIKGGRHVLCAYRMRPRPGHGYVETAAHF
FT                   AAESSTGTNVEVCTTDDFTRGVDALVYEVDEAEGLMKIAYPVDLFDRNIIDGKAMIASF
FT                   LTLTVGNNQGMSDVENAKMEDFYVPPEFLKLFDGPACNISHMWKVLGRPEVNGGMVVGT
FT                   IIKPKLGLRPKPFADACHQFWLGGDFIKNDEPQGNQVFAPLKETMRLVADAMRRAQDET
FT                   GVPKLLSANITADDPAEMIARGNFILETFGENASHVAFLVDGFVAGPTAVTTCRRNFPD
FT                   TFLHYHRAGHGAITSRQSKRGYTVLVHMKMARLLGASGIHTGTMGYGKMEGAPDEKMVA
FT                   YMLERQIAEGPYYRQDWGGMASCTPIISGGMSALRLPGFFDNLGHSNVIQTSGGGAFGH
FT                   KDGAIAGALSLRQAHEAWLKKIDLVDYAQTHAELRGAFESFASDADRLYPGWRDRLRIA
FT                   A"
XX
SQ   Sequence 1594 BP; 309 A; 486 C; 504 G; 295 T; 0 other;
     gtgttccgga gccatgtcgt cacggccata gtagcgtcca cgaatacaag ggcgaatgcc        60
     cggaactcac tgggagacgt cgggaccatg gaccagtcga agcgttatgt gaacttggcc       120
     ctgagcgagg ctgatctgat caagggcggc cgccatgtgc tgtgcgccta ccgtatgcgg       180
     cccaggcccg gtcacggcta tgtggagacg gcggcccatt tcgccgctga atcgtctacc       240
     ggcaccaatg ttgaggtctg taccaccgac gacttcaccc gcggcgtcga tgccctggtc       300
     tatgaggtgg acgaggcgga ggggttgatg aagatcgcct atccggtgga tctgttcgac       360
     cgcaatatca tcgacggcaa ggcgatgatc gcctcgtttt tgacgctgac cgtgggcaac       420
     aaccagggca tgagcgacgt ggaaaacgcc aagatggagg atttctacgt tcccccagag       480
     tttctgaaac tgttcgacgg cccggcttgc aacatctccc atatgtggaa ggttctgggg       540
     cggcccgaag tgaatggcgg catggtggtg gggaccatca tcaagccaaa gctgggactg       600
     cgccccaagc ccttcgccga tgcctgccac cagttctggc tgggcggcga tttcatcaag       660
     aacgacgaac cccagggcaa tcaggtcttc gcgccgctca aggagaccat gcggctggtg       720
     gccgatgcca tgcgccgcgc ccaggacgag acgggcgtgc ccaagctgtt gtccgccaac       780
     atcaccgctg acgatcccgc cgagatgatc gcgcgcggca atttcatcct ggagaccttc       840
     ggcgagaacg cctcccatgt ggctttcctg gtggatggct tcgtggccgg gccgacggcg       900
     gtcaccacct gccgccggaa ctttcccgac accttcttgc actaccatcg ggccggtcac       960
     ggtgccatca cctcgcggca gtcgaagcgc ggctataccg tgctggtcca tatgaagatg      1020
     gcccggctgt tgggggccag cggtatccac accggcacca tgggctatgg caagatggag      1080
     ggcgcccccg acgaaaagat ggtggcctat atgctggaac gccagatagc cgaggggccc      1140
     tattatcgcc aggactgggg cggcatggcg tcttgcaccc ccatcatatc gggtggcatg      1200
     agcgcccttc gcctgcccgg cttcttcgat aatctgggcc attccaacgt gatccagacc      1260
     tcgggcggcg gcgccttcgg ccataaggac ggagccatcg ccggtgccct gtcgctgcgc      1320
     caggcccacg aggcatggct gaagaaaatc gatctggtgg attacgccca aacacatgcg      1380
     gaactgagag gtgccttcga atcctttgcg tccgacgccg atcggctgta tcccggctgg      1440
     cgcgatcgcc tgcgcatcgc ggcataaggg gaatcaagat gtccaggaaa catccggtca      1500
     tcgccgttac cggctcgtcg ggggcgggga ccagcacggt caaggaatcc ttcgaacata      1560
     tgttccgccg cgagggcatc aaaccggcgg tgat                                  1594
//