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EBI DbfetchID AF435978; SV 1; linear; genomic DNA; STD; PRO; 8737 BP. XX AC AF435978; XX DT 04-OCT-2002 (Rel. 73, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Clostridium cellulovorans hypothetical protein gene, complete cds; dxylA DE pseudogene, complete sequence; and xylanase (xynA) gene, complete cds. XX KW . XX OS Clostridium cellulovorans OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-8737 RX DOI; 10.1128/AEM.68.12.6399-6402.2002 RX PUBMED; 12450866. RA Kosugi A., Murashima K., Doi R.H.; RT "Xylanase and acetyl xylan esterase activities of XynA, a key subunit of RT the Clostridium cellulovorans cellulosome for xylan degradation"; RL Appl. Environ. Microbiol. 68(12):6399-6402(2002). XX RN [2] RP 1-8737 RA Kosugi A., Murashima K., Doi R.H.; RT ; RL Submitted (18-OCT-2001) to the EMBL/GenBank/DDBJ databases. RL MCB, University of California Davis, One Shields Avenue, Davis, CA 95616, RL USA XX FH Key Location/Qualifiers FH FT source 1..8737 FT /organism="Clostridium cellulovorans" FT /mol_type="genomic DNA" FT /db_xref="taxon:1493" FT CDS 228..2501 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="GOA:Q8GH60" FT /db_xref="InterPro:IPR002052" FT /db_xref="UniProtKB/TrEMBL:Q8GH60" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAN32824.1" FT /translation="MDMWQEEFENSVRHQVMIMIDEKLKSKKNQVNNERYYKSHNRNSF FT FNDIFRKYGAVYSIIFRQGLAKTNIQYAELFSLLKNCLPESCTSVEFMGDKGYIDKINS FT LIECFFNDNYISNIIEIRSYDHKKFKEMLDERITAFSELYSSLFKNLVSVTFLYNSCIL FT FLPSAIEIDDLTMKKICALSGYIHSIGRSIFVRNLNNVNEDFFYSKLRTYLKNIYGNLN FT NIQEKEEKIRFIPFAYEDFLDDELSKSHSELDALKFHMEKLYLGKKRITEVLEDIEKDE FT QFKKTIKVGTPYNGVDGDVKQEHCIWMCMDCTPEYNINQSTNIVDTPVKSKNKYLICYD FT QFICNKNEYYIFNENMPGWYDNVTIPHTLMAAMINLTGINRLNNSNRKINILDPFVGAG FT TSYFQAAKFQNINFTGFDKNSTAIDALRFNKNFFEMDTQKIDRFIRLLYKLLIILNNNQ FT EFNVSSLFNMKSIEENELWSDIMDDKNQRSFSEELLSYCEKYYSFFNKYGKNLIIDNLE FT LIVKNVEEHFSYIFNRSNTLKILKFLTLKAVRRHGIPISRNRYDSKKALYIETKLLIKS FT IYRYRIAIENRNNCDGEAFEKLGLGLMTNKYSLSTHISENYNYNPIFQVGDCRKCIDSY FT SNMKYDLIITDPPYGFNTDEDIIYMSNLYKDIIKRMIEKLNRNGQIIMCLPATSYTGRN FT IEYFTQANIVPMQVIDICKNLNNPRSLKNDAHLNLPPKNFFKPPYYWESGKSLRRHILH FT FTFD" FT CDS 4302..5948 FT /pseudo FT /codon_start=1 FT /transl_table=11 FT /gene="dxylA" FT /note="putative beta-xylosidase-like protein; member of FT glycosyl hydrolase family 5/39" FT CDS 6337..7899 FT /codon_start=1 FT /transl_table=11 FT /gene="xynA" FT /product="xylanase" FT /db_xref="GOA:Q8GH59" FT /db_xref="HSSP:1F5J" FT /db_xref="InterPro:IPR018208" FT /db_xref="UniProtKB/TrEMBL:Q8GH59" FT /protein_id="AAN32825.1" FT /translation="MKQKMRIVFSMLMCITILLASSAVGVLAATKTITSNETGNFEGYD FT YEYWKDNGTGTMTLTGGGTFSCSWSNINNILFRTGKKLGSTKTYKDYGKISINYDCNYQ FT PNGNSYMAVYGWTEDPLVEYYIIDSYGTWNPGSNSTLKGTTTVDGRTYQIYQNSRTGPS FT IKGNNTTFQQYWSICTSKRTSGTITVSDHFKAWENLGMKMGKMYEVSMVVEGYQSSGKA FT DMTKMDLIMGDTPPVIVDQPTPEKLLGDVDNNGTVNALDLAIYKKFLLGMIPSLPATGD FT VDQNGRMNAIDFAMIKQHLLGIIKLGKLPTTSEDPNKKLVALTFDDGPSSQTGLVLDKL FT KKYNAKATFMVIGNKISSADAIMKRIVSEGHEIGNHGWSYDSMANMSASQITQEINQCN FT SAIKQYTGSDPKFFRPANLATSQTLFQTVKLPFVQGVIAQDWNGASATTAEARAQLVLN FT GTQDGSIVLMHCTQPGYHPTPEALDIIIPQLQQQGYSFVTLSDLFKLKGKTPQLGTMLN FT GAF" XX SQ Sequence 8737 BP; 3253 A; 1167 C; 1511 G; 2806 T; 0 other; gaattcatat attgaggacg tctacatata tgtatatata aagtttaata ttgtactagg 60 tatagaattg aattagaaaa atataatgta ttatgaatca ttcaaaacca tataatgtaa 120 aatttgaatt tgaatgagag atgctaattt ttttgagaat aaaaacatta catcaaagct 180 gattttaagc tgaacacatt agaattttgt taaatttgga ggaatgtatg gatatgtggc 240 aagaggaatt tgaaaatagt gtaagacatc aagttatgat tatgatcgat gaaaaattaa 300 aatctaagaa aaaccaagta aataatgaga gatattataa aagtcataac agaaattctt 360 tttttaatga tatttttcga aaatatggtg ctgtctattc tataatattt aggcaaggat 420 tagctaaaac aaacatacag tatgctgaac ttttctcatt acttaaaaat tgtttacctg 480 aatcatgtac aagtgttgaa tttatggggg ataagggata tatagataaa ataaattcat 540 taatagaatg cttttttaat gataattata tatcaaatat tatagaaatt aggagctatg 600 atcataaaaa gtttaaggaa atgctagatg aaagaattac tgctttctca gaattatatt 660 cttcattatt taaaaatctt gtatcagtaa catttttata taatagttgc atattatttt 720 taccaagtgc aatagaaatt gatgatttaa caatgaaaaa aatttgtgca ttatcaggat 780 atatacattc tatcggaaga agtatttttg ttagaaatct taataatgta aatgaagatt 840 tcttttattc aaagttgcga acttatttaa aaaatatata tggtaatcta aataatattc 900 aagaaaaaga agaaaaaata agatttattc ctttcgcata tgaagatttc ttagatgatg 960 aattaagtaa gagccattcg gagcttgatg cgttaaagtt tcatatggaa aaattgtatt 1020 taggtaaaaa gcgtataact gaagtactag aggatattga gaaagatgag caatttaaaa 1080 agactattaa agttggaact ccatataatg gagttgatgg agatgtaaaa caagaacatt 1140 gtatctggat gtgtatggat tgtactccag agtataacat taatcaaagt actaatatag 1200 tagatacacc tgtaaaaagt aaaaataaat atttaatatg ctatgatcaa tttatatgta 1260 ataaaaatga atattatatt tttaatgaaa atatgcctgg ttggtatgat aatgttacta 1320 tcccacatac cctaatggct gctatgatta atcttacggg cattaataga ttaaataatt 1380 caaatagaaa aataaatatt ttagatccgt tcgttggagc aggaacgagc tattttcaag 1440 ctgcaaaatt tcaaaatatt aattttactg gatttgataa aaatagtaca gcaatagatg 1500 ctttaagatt caataaaaat ttttttgaga tggatacaca aaaaatagat agatttatta 1560 gactattata taaacttttg attatactta acaacaatca agagtttaat gtctcaagtt 1620 tatttaatat gaaaagtatt gaagagaatg aactttggtc agatataatg gatgataaaa 1680 atcaaaggtc attttcggaa gaattactaa gttattgtga aaaatattat agcttcttta 1740 acaagtatgg taaaaacctc attatagaca atttggagtt gatcgtaaaa aacgtagaag 1800 aacatttttc ctatattttc aatagaagca atactctgaa aattcttaag tttttgactt 1860 taaaagcggt tcgaagacat ggcattccaa tatctagaaa tagatatgat agtaaaaaag 1920 cgttatatat tgaaactaag ttattgatta agtcaatata cagatataga attgctattg 1980 agaatagaaa caattgtgat ggagaagcat ttgagaagct tggtttagga ttaatgacaa 2040 ataaatattc acttagtaca cacatatcag aaaactataa ttataaccca atttttcagg 2100 tgggtgattg cagaaaatgt atagatagct actcaaatat gaaatatgat ttaattataa 2160 ctgatccccc gtacgggttt aacactgatg aagatataat ttatatgtct aatttataca 2220 aagatataat aaaaagaatg atagagaaac ttaacagaaa tggacaaata attatgtgcc 2280 ttccagcgac ttcgtacacc ggaaggaata ttgaatattt tacacaagcc aatattgtac 2340 caatgcaagt aattgatata tgtaaaaatc tcaataatcc tagaagctta aaaaatgatg 2400 cccatttaaa tcttccacct aaaaattttt ttaagccacc atactattgg gaatctggca 2460 aatcattgag aagacatatt ttacatttta cgttcgacta aataaatgta gaaaatttct 2520 aacaatttat cagagttatt ttaattaaaa gtataaataa aagtagtata tattattttg 2580 tatccatagt agtaatatct gttttctaat gaaaattata taataataga ccttttaagc 2640 aagagtctat ctatagacgc tgtagttcct aatgacaatt gtcatggacc taagttacat 2700 gatttagtca ctctaggcgg ttatatcacg gattttactg taacagccac aaatatattg 2760 atgagagaga acttacgagt aattcagagt ttgacatact tatagataat aaaaattata 2820 taggttgaaa agttgtttcg taattaaaag caacaagata tattaatctt ttaacgataa 2880 atcgcaacaa tagctgaacc aatcttttaa aaccaattaa acagttggag ttcaaagttt 2940 gtagtatagt agaaattaat taaatataca gagatttttt gcaaaatcaa ctaggggctt 3000 tgccgcaaga gtatcaaata aaatctttga tattttgcga atgaaatttt gaatatagat 3060 atagaaatat aaaagattag agtgttagta tttgaatatt aacttaaaaa attagtacat 3120 tagccaatag gattaatccg tctaagttta tggcataaag atccttctaa gaaaagctta 3180 tatgttatcg tagcgattaa tttaagcagt aattaaacat taaatggtca taattgacag 3240 atatatttaa gataaaattg atataaaagt ccgtattctg ggcttttatt tttatctatt 3300 caacgaaaaa gttgtgtttg actatatact gcatatatta gtatttaccc ttattttctt 3360 tcaaaaactg aaatcttatt tgttgccttg cttcaattct tcctatttta tccgtaatct 3420 tcacattatt catattcact tatccatcta taaaaagaat tataacgtat agatagtttt 3480 tggctacata taccatctta aagaactaat tttacagcag caattttaaa ctgtttatga 3540 taacttcttc ccataagtag atcaccgttc attattttct cttaacttag tgtctacttt 3600 agtataccaa ttccaaaagt aactcatgta gcaaaagaaa ttagggttat cgaagctatc 3660 gtaagaagac gggtaaaaga atatggaacc tatagagata atgcatttct tcgtaaggga 3720 aagttaaaac cagatgatga gaaattaaga ttgctaaaaa agaaaatagc tggtttaaag 3780 gcggaaaata caatcctaaa aaaaagatat atgcatcttc acaaattctt tggaattatt 3840 tacaataata aatataaatt ccatatgaaa aagatgtgcg tgattttaga aataaaaaga 3900 aatctttagt atgctttgct aaagagacca gaactcaaga aaaaatggaa tgaattgtag 3960 aaaaaataca gtttcaagat taatgaatga aaataacatt catctaaagc agaagtcaga 4020 acagctattg ttgaatatat aaaattattc tacaatttaa caagattaca tttaatttta 4080 gcttataatt caccaagata gttcaaatat aatacataag aataacgatt tataagattc 4140 taagaaaatg aaaaaaatat acttttcata tgtttatttt agtcaaaaca ctcgatgttt 4200 ttgtagcttc tttacgatgg acaagctgaa tatggtggga gatataatta aagccttaaa 4260 aaatgaaagg aggtgaattt tgaaatcaaa agagatacaa catgatttta gaattgagta 4320 aatcttacat tttagcaaaa acaaagaatt acggggaggt atgtattatg aaaaaagttt 4380 tatcaatagc gatatgttta tgtacaatgg tagtaatgtc tctagcttca aaagtattgg 4440 cagtgtcagc cagttctatg actgtagact gtgcaagtgt gcttagagat gcaacacatt 4500 gtgcaagtgg ttcactttat ggaatcactg aaactaaacc agcggatgtt aacggtctcg 4560 tagcaccgct taaatcatat gtaatgagaa atccggctcg aggtggctat ggaaatcagc 4620 atggctttgg tgctgcaata cctgtttctc aaaagcttgc ctcagttcaa agtgctaaag 4680 tatcaattga tctggcagat atgcttccag gctggccata caaatggcca ggtatgacaa 4740 gttggtttaa tcaggttaat tcatttatct ctgataagaa agcatctggt cgtaacaatt 4800 attatggtta tgaaatttgg aatgaacctg atggtactta gaactctgct aacggaaatt 4860 tcaatgatat gtggaagcag acttacaatg ttattcgtgc aaatgatcct ggtgctaaaa 4920 tcataggtcc ttgctacagc tactataatc gtactacatt gagtaatttt ctaagctttt 4980 gtagaacgaa caactgtatt cctgatataa tgagttggca tgaactttgc ggaatagaat 5040 gggtatcacg aaatttaaga gattataggc aattggaaaa atccttgggg ataagcgcgt 5100 tgccgattag tataaacgaa tattgtgatg ctgaccataa ctttgaaggg cagccaggat 5160 catcagcaca gtttatagga aaatttgagc gttataaggt agaaagtgca tgtatatcct 5220 ggtggtttgt tccgtctcca ggcagattag gaagtcttct tgctactgac acgcaaaagg 5280 gtccaggctg gtatttctat aaatggtatg gagatatgac tggaaaaatg gttaatgtca 5340 caccaccaaa tgatgacagt aagcttgtag atggagctgc atgtgttgat tcgagtagca 5400 agtctatcag ttttattttt ggtggatcaa atgacggtac cataagtaca acattcaaaa 5460 acctcccatc ctttatagga tccacagcat cagttaaggt agaaaaaatt gattgggtaa 5520 gtaaggatac tgtatcctat ggaccatcta caatttcaac ctcaaattat tcagtggtga 5580 acggacagat tacagtaaca ttaacaggtt gcaacaatag ttcaggatat cgtatctata 5640 ttaccccagg aactggcagt agtgtgtttg gaggaacata taagttgatc aaccgtgaaa 5700 gcggaaaggc tttggatgtt tacaataatt caacagaaaa cggagctgac gtcatacagt 5760 ggagtgataa tggacaggaa aatcagaggt ggaatattgt agatttgggg aatggatatt 5820 acaatgttgt aaatgtacat agcggcaaat ttttggatgt tgataataag tcaacagcag 5880 atggtgctaa tgtgctacag tggagcagta acggtggtta caaccaacag tggcagattg 5940 taacttcata attcagaaat aaatatttaa gtgtacccca aatgttatat gaactttttc 6000 accagaatac caattaagtc agaaggttct tgtaagtatg gtggagaatt tacttcagta 6060 atatattata taagtgaaaa aataagtaat aaaaagcagt ggatatttta gtaaattatt 6120 attttatcca ctgctttttt atatcttgct gaaaaatcaa aatgcattta gttaggatga 6180 gcctttctgc taaaagactg acttaacctt tgttataata ttaaatattt tactattagt 6240 attaaatatt ctactaatta ccttagtgat atatccaaac ttgaataaag tagttataat 6300 gtatataaaa ataaatttta gaaaggatag tataaaatga aacaaaaaat gaggatagtt 6360 ttttcaatgt taatgtgtat taccattttg ttagcctctt ctgcagtagg cgtacttgct 6420 gcaacaaaaa cgatcacctc aaatgagact ggtaactttg aaggctacga ctatgaatac 6480 tggaaggata acggaaccgg aaccatgact ctcactggtg gtggcacgtt cagctgttcg 6540 tggagtaata tcaataatat attattccgt accggcaaga aacttggctc gacaaagaca 6600 tacaaagatt atgggaaaat atcaataaac tacgattgca actaccaacc aaacggcaat 6660 tcgtatatgg ctgtctatgg atggactgaa gatccacttg tagaatatta catcattgat 6720 agctatggca cttggaatcc aggaagtaat agtacattaa agggcaccac taccgttgat 6780 ggacgtacat atcaaatata tcagaactcg cgaacaggtc cttctattaa gggtaataat 6840 acaacttttc agcagtattg gagcatctgt acatctaaaa gaacaagtgg aaccataact 6900 gttagcgacc actttaaggc ttgggaaaat ctaggaatga agatgggcaa gatgtatgaa 6960 gtctcaatgg tagtagaggg atatcaaagt agtggtaaag ctgatatgac taaaatggat 7020 cttattatgg gggacacccc acctgttatc gttgaccaac ctaccccaga aaaattactt 7080 ggtgacgttg acaataacgg tactgtaaat gcacttgatc ttgctattta caaaaagttt 7140 ttgttaggaa tgataccttc tttacctgct acaggagatg tagatcaaaa cggtagaatg 7200 aatgctattg actttgctat gataaaacag catcttttag gcattattaa attaggtaaa 7260 ctaccaacta catctgagga tccaaacaaa aaactcgttg ctctcacatt tgatgatggt 7320 ccaagtagtc aaacaggatt agtacttgat aaactaaaaa agtacaatgc taaagcaaca 7380 tttatggtta ttggaaataa gattagtagc gccgatgcaa ttatgaaaag aattgtaagt 7440 gaaggtcatg aaattgggaa ccatggatgg agctatgata gtatggctaa tatgtctgct 7500 tcacaaataa cgcaagaaat taaccagtgt aattctgcga ttaagcagta cacaggttcg 7560 gaccctaaat ttttccgtcc agcaaatctt gcaacaagcc agactttatt ccagactgtt 7620 aagctaccgt ttgtacaagg tgttatagca caagattgga atggagcatc agcaacaaca 7680 gctgaagcaa gggcacaatt agtattaaac ggtactcaag atggttctat tgtgttaatg 7740 cattgtactc aacctgggta tcatccaaca cctgaagcat tagacattat aattccacaa 7800 ctccaacaac agggttatag ttttgtaact ttaagtgatt tatttaaact aaaaggaaaa 7860 acaccacaac ttggtacaat gttaaatggt gcattctaat ttattgtaga gactatgaga 7920 agtttttgtg tttttacaca ttacttctca cagtctctat acccactaaa ataagggttt 7980 catgcggtgg ttgtcaagac ggttgtcgta taatttttag agttatgctt gttatttttt 8040 taacatacac aattacaaaa gacaaggttc ttacaattaa ttaaataggg ggtcacgttc 8100 taacctgtta cttctagttt tggtttaata tcattatttg gattaagtgc taccagttta 8160 ggtaagtccc tttttcttat cactttgtta agcctctgag gatttagaat tttagctgta 8220 gcataaacaa cgtttcgttt attcattatt tcttcagttt tatctttaag tctactcttt 8280 ggggttataa aatttgaaaa tacaggataa gccacaagag ttgatattcc tgaaatttca 8340 gcattaatac ctgaaagtag acatttagat gaataggtaa attgtttcat tgtttttgtg 8400 taaataatat tataccagtt ttttctatgt gtggtttttt aagtggaaga gtactaaaat 8460 cgtactaata ttttgctaaa atcctaaaaa atatcataaa atagatacaa taaatacacc 8520 aagaaacacc acttaacaca tgataataac atacaatcat agaaatatac tgtattaaac 8580 tttaaaacaa ttaaggaaaa ataaaaaata ttagatataa acttcagtaa ataagtatat 8640 ttaagaacta atataaaaga ctgctgaaca aaaagttctg agtatactca gggctttttt 8700 cttacaagaa gcatattact aagaatataa cgcaagg 8737 // |
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