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EBI DbfetchID AF426027; SV 2; linear; mRNA; STD; PLN; 3096 BP. XX AC AF426027; XX DT 15-OCT-2001 (Rel. 69, Created) DT 17-NOV-2002 (Rel. 73, Last updated, Version 3) XX DE Chlamydomonas reinhardtii copper target homolog 1 protein (CTH1) mRNA, DE partial cds; nuclear gene for chloroplast product, alternatively spliced. XX KW . XX OS Chlamydomonas reinhardtii OC Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; OC Chlamydomonadaceae; Chlamydomonas. XX RN [1] RP 1-3096 RX DOI; 10.1105/tpc.010420 RX PUBMED; 11910013. RA Moseley J.L., Page M.D., Alder N.P., Eriksson M., Quinn J., Soto F., RA Theg S.M., Hippler M., Merchant S.; RT "Reciprocal expression of two candidate di-iron enzymes affecting RT photosystem I and light-harvesting complex accumulation"; RL Plant Cell 14(3):673-688(2002). XX RN [2] RP 1-3096 RA Moseley J.L., Page M.D., Alder N.P., Eriksson M., Quinn J., Soto F., RA Theg S.M., Hippler M., Merchant S.; RT ; RL Submitted (17-SEP-2001) to the EMBL/GenBank/DDBJ databases. RL Chemistry and Biochemistry, University of California, Los Angeles, 607 RL Charles E. Young Dr. East, Los Angeles, CA 90095-1569, USA XX RN [3] RC Nucleotide and amino acid sequences updated by submitter RP 1-3096 RA Merchant S., Moseley J.L., Kropat J.; RT ; RL Submitted (15-NOV-2002) to the EMBL/GenBank/DDBJ databases. RL Chemistry and Biochemistry, University of California, Los Angeles, 607 RL Charles E. Young Dr. East, Los Angeles, CA 90095-1569, USA XX CC On Nov 15, 2002 this sequence version replaced gi:16119159. XX FH Key Location/Qualifiers FH FT source 1..3096 FT /organism="Chlamydomonas reinhardtii" FT /mol_type="mRNA" FT /db_xref="taxon:3055" FT 5'UTR <1..1058 FT /gene="CTH1" FT /note="contains six short ORFs starting with ATG, likely to FT prevent translation; different from +Cu transcript FT deposited in GenBank Accession Number AF337037" FT CDS 1059..2282 FT /codon_start=1 FT /gene="CTH1" FT /product="copper target homolog 1 protein" FT /note="-Cu or hypoxia transcript; alternatively spliced; FT non-functional transcript; remainder of transcript is like FT +Cu transcript deposited in GenBank Accession Number FT AF337037" FT /db_xref="GOA:Q9AR22" FT /db_xref="InterPro:IPR003251" FT /db_xref="UniProtKB/Swiss-Prot:Q9AR22" FT /protein_id="AAL14712.2" FT /translation="MATMLNKRVTGAFGKQALVRSARVAAVRPSRSSVRVAVTAAPQEV FT EGFKVMRDGIKVASDETLLTPRFYTTDFDEMERLFSLELNKNMDMEEFEAMLNEFKLDY FT NQRHFVRNETFKEAAEKIQGPTRKIFIEFLERSCTAEFSGFLLYKELGRRLKATNPVVA FT EIFTLMSRDEARHAGFLNKAMSDFNLALDLGFLTKNRKYTFFKPKFIFYATYLSEKIGY FT WRYISIYRHLQRNPDNQLYPLFEYFENWCQDENRHGDFFTAVLKARPEMVNDWAAKLWS FT RFFCLSVYITMYLNDHQRDAFYSSLGLNTTQFNQHVIIETNKSTERIFPAVPDVENPEF FT FRRMDLLVKYNAQLVDIGSMNLPSPIKAIMKAPILERMVAEVFQVFIMTPKESGSYDLD FT ANKTALVY" FT 3'UTR 2283..>3096 FT /gene="CTH1" XX SQ Sequence 3096 BP; 581 A; 922 C; 952 G; 641 T; 0 other; gctcagccgg caattcactg cgctggcata tcgcgcaata agctactgaa cacacgtgtc 60 taggtggcct accaggccgg gagcaggtcc gcggagggcg cgcaaacgac gcagctgcgc 120 acgcgattca gggattcgct ctggcctttc gacacgcggg ctagcctgtc acagcagctc 180 ggcctatgtg ctgcgcccag cgcactactg ggccgtgtgg atgatgagcg gaggagcgtg 240 cgagcagaac atgcggagac cctccgggcg ccagctgccg gcgcttgacg cgcaaggctg 300 gcacacatgc gctgcactcg ctgcgctgga ttgtcgggtt ggagtgggct aagttgattc 360 gtcaggagac gactacggac tacattttgc tgctgctggg gcatgcgcca agtttcgtgg 420 tgctaacgct gggtgcccct gcgcaaaagc ccacgatatc ctctccaagg ggggcccagc 480 accccttcac gtcccggcag ccaccgcacc agtggcagcg cagcagcaac agcaatacag 540 catctatact tctctttatc tacgcagcag cacagctcac tggcggccag gctcgccggt 600 gggactctcg gcgactcgct tgcaacaccc atgggtgtgc accggactgc gacttgcgca 660 gatccgtttg gcgctttggg taagcgattc acaacactat taagacaact cagtgcagca 720 gccagcgcta gagcgcgccg gcccaagcac ttgcgggcat cgggctagac ttggggaccc 780 ggcgagcaga ccccggcgag ccaatttcat gcagcagtcg atatccgcgc catcgcgctg 840 gcctgggggc tgctcgcgtt ggggattcgc cggcgatctg cgacgcaatg agactccaga 900 tccttgcatt gacgtgggcg ccccgccccc cagactttct gcgctcggcc catcgcaggg 960 tctgcttaat aggctagctc gctactccta ttcagtctgg tgatctctat acatcaccag 1020 tgcttcattc agtcaattag gtcatttcag cagcagctat ggccaccatg ctgaacaagc 1080 gtgttaccgg cgccttcggc aagcaggcgc tggtgcgctc ggcccgcgtc gccgctgtgc 1140 gccccagccg cagctccgtc cgtgtggctg ttaccgctgc tccccaggag gttgagggct 1200 tcaaggttat gcgcgacggc atcaaggttg cttccgatga gaccctgctc actcctcgct 1260 tctacaccac cgacttcgat gagatggagc gcctgttcag cctggagctg aacaagaaca 1320 tggacatgga ggagttcgag gcgatgctga acgagttcaa gctggactac aaccagcgcc 1380 acttcgtccg caacgagacc ttcaaggagg ccgcggagaa gattcagggc cccacccgca 1440 agattttcat tgagttcctg gagcgctcgt gcactgctga gttctcgggc ttcctgctct 1500 acaaggagct gggtcgccgc ctgaaggcca cgaaccctgt ggtcgcggag atcttcaccc 1560 tgatgtcccg tgacgaggcc cgccacgccg gcttcctgaa caaggccatg tccgacttca 1620 acctggctct ggacctgggt ttcctgacca agaaccgcaa gtacaccttc ttcaagccca 1680 agttcatctt ctacgccact tacctgtcgg agaagattgg ctactggcgc tacatttcta 1740 tctaccgcca cctgcagcgc aaccccgaca accagctgta cccgctgttc gagtacttcg 1800 agaactggtg ccaggacgag aaccgccacg gtgacttctt caccgccgtg ctgaaggcgc 1860 ggccggagat ggtcaacgac tgggctgcca agctgtggtc gcgctttttc tgcctgtcgg 1920 tgtacatcac catgtacctg aacgaccacc agcgcgacgc cttctacagc tctctgggcc 1980 tgaacaccac ccagttcaac cagcacgtga tcatcgagac caacaagtct actgagcgta 2040 tcttccccgc tgtgccggat gtggagaacc ccgagttctt ccgccgcatg gacctgctgg 2100 tcaagtacaa cgcccagctg gtggacatcg gcagcatgaa cctgcccagc cccatcaagg 2160 cgatcatgaa ggcgcccatt ctggagcgca tggtcgctga ggtgttccag gtgttcatca 2220 tgacccctaa ggagtcgggc tcgtacgacc tggatgccaa caagaccgct ctggtctact 2280 aagcggctgg cgtactagcc tgcgggagct gggcggctgg atgtcggagt tttgagagtg 2340 ctttggagct cggcggcgag cagcagctgt gtgtggcagc gtgtgtgtgc agcagcaagt 2400 gtaggtatac agccagtggc gctgctcgct ggcggcgcgg tgtcgtgttg ggcgccgtcc 2460 gacagcgccg cggcggcccg ctgccgtagt cgacgcgggt tggtcactca tccaggagac 2520 gacctctcga gtagctgata gcttgagatg agggttctct atgcgcagac ctggagcggc 2580 gggtgccgca tgcttgggtg ctgcagcggg gcatgtcgct gtgcgtgccg gtgcagccct 2640 ggagtgttac gcaacggagc gggcgcgtga gcgtgaggag cgggcatggc gtaggactcg 2700 gacggcgcgt gctctcccat gtgtgttatg agctgtgcgt cgcgggcttg tctgttttga 2760 ttgtatgata tccctgtcgc gcggcgtttt gcaggacccg gtaattttgg tacgttgccg 2820 tgcctcaacg ctgacgcagg gacctgtgag ggttgactcg aagagctcga gggcccgttt 2880 cttgtgattg tatgttgtct gaacgtttct tcggaacacg cggatgcgaa tgcattggag 2940 aggagaggga gtgaattacc cgtcacatat attgggggcg cctattgcct aggttaggca 3000 aaggtacgaa gccgcggcgt atgcacaacg caatgcggaa attttatgcg gcacgtgacc 3060 acgcagtccg gccgttgtgc aaattgtttg gaatca 3096 // |
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