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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF414081; SV 1; linear; mRNA; STD; PLN; 1714 BP.
XX
AC   AF414081;
XX
DT   21-MAR-2003 (Rel. 75, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Hordeum vulgare subsp. vulgare cultivar Morex endosperm-specific
DE   beta-amylase 1 (bamy1) mRNA, complete cds.
XX
KW   .
XX
OS   Hordeum vulgare subsp. vulgare (domesticated barley)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Pooideae; Triticeae; Hordeum.
XX
RN   [1]
RP   1-1714
RA   Clark S.E., Hayes P.M., Henson C.A.;
RT   "Effects of single nucleotide polymorphisms in beta-amylase1 alleles from
RT   barley on functional properties of the enzymes";
RL   Plant Physiol. Biochem. 41(9):798-804(2003).
XX
RN   [2]
RP   1-1714
RA   Clark S.E., Henson C.A., Chen F., Hayes P.M.;
RT   ;
RL   Submitted (24-AUG-2001) to the EMBL/GenBank/DDBJ databases.
RL   USDA-ARS-Cereal Crops Research Unit, Department of Agronomy, University of
RL   WI-Madison, 1575 Linden Drive, Madison, WI 53706, USA
XX
DR   GrainGenes; AF414081; AF414081.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1714
FT                   /organism="Hordeum vulgare subsp. vulgare"
FT                   /chromosome="4"
FT                   /sub_species="vulgare"
FT                   /cultivar="Morex"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:112509"
FT   gene            1..1714
FT                   /gene="bamy1"
FT   CDS             16..1623
FT                   /codon_start=1
FT                   /gene="bamy1"
FT                   /product="endosperm-specific beta-amylase 1"
FT                   /note="hydrolase"
FT                   /db_xref="GOA:Q84T20"
FT                   /db_xref="HSSP:1B1Y"
FT                   /db_xref="InterPro:IPR001371"
FT                   /db_xref="InterPro:IPR001554"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="InterPro:IPR018238"
FT                   /db_xref="UniProtKB/TrEMBL:Q84T20"
FT                   /protein_id="AAO67355.1"
FT                   /translation="MEVNVKGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGV
FT                   DGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIP
FT                   IPQWVRDVGTCDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENM
FT                   KEFLDAGVIVDIEVGLGPAGEMRYPSYPQSHGWSFPGIGEFICYDKYLQADFKAAAAAV
FT                   GHPEWEFPNDVGQYNDTPERTQFFRDNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANK
FT                   VFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFT
FT                   CAEMRDSEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPH
FT                   GINQSGPPEHKLFGFTYLRLSNQLVEGQNYANFKTFVDRMHANLPRDPYVDPMAPLPRS
FT                   GPEISIEMILQAAQPKLQPFPFQEHTDLPVGPTGGMGGQAEGPTCGMGGQVKGPTGGMG
FT                   GQAEDPTSGMGGELPATM"
XX
SQ   Sequence 1714 BP; 446 A; 421 C; 480 G; 367 T; 0 other;
     tacccagcag ccacaatgga ggtgaacgtg aaaggcaact atgtccaagt ctacgtcatg        60
     ctccctctgg acgccgtgag cgtgaacaac aggttcgaga agggcgacga gctgagggcg       120
     caattgagga agctggtaga ggccggtgtg gatggtgtca tggtagacgt ctggtggggc       180
     ttggtggagg gcaagggccc caaggcgtat gactggtccg cctacaagca gttgtttgag       240
     ctggtgcaga aggctgggct gaagctacag gccatcatgt cgttccacca gtgtggtggc       300
     aacgtcggcg acgccgtcaa catcccaatc ccacagtggg tgcgggacgt cggcacgtgt       360
     gatcccgaca ttttctacac cgacggtcac gggactagga acattgagta cctcactctt       420
     ggagttgata accagcctct cttccatgga agatctgccg tccagatgta tgccgattac       480
     atgacaagct tcagggagaa catgaaagag ttcttggatg ctggtgttat cgtcgacatt       540
     gaagtaggac ttggcccagc tggagagatg aggtacccat catatcctca gagccacgga       600
     tggtcgttcc caggcatcgg agaattcatc tgctatgata aatacctaca agcagacttc       660
     aaagcagcag cagcggcggt tggccatcct gagtgggaat ttcctaacga tgtcgggcag       720
     tacaatgaca ctcccgagag aactcaattc ttcagagaca acgggacata cctaagtgag       780
     aaggggaggt ttttccttgc atggtactcc aacaatctga tcaagcacgg tgacaggatc       840
     ttggatgaag caaacaaggt cttcttggga tacaaggtgc aactggcaat caagatctct       900
     ggcattcact ggtggtacaa ggttccaagc catgcagccg agctcacagc tgggtactac       960
     aacttacatg atagagacgg ctacagaacc atagcacgca tgctcaaaag gcaccgtgct      1020
     agcattaact tcacttgcgc ggagatgagg gattcggagc aaagctcgca ggcgatgagc      1080
     gcaccagaag aactagtcca acaggtgttg agtgctggat ggagagaggg cctaaatgtg      1140
     gcatgcgaaa acgcgcttcc acgatatgat ccaactgctt acaacaccat actcaggaat      1200
     gcgaggcctc atggaatcaa ccagagcggc cctcctgagc acaagctgtt tggattcacc      1260
     taccttcggc tgtcgaatca gctggtggag ggacaaaact atgccaattt caagaccttt      1320
     gtcgacagaa tgcatgccaa cctgcctcgt gacccatatg ttgatccaat ggcgcctttg      1380
     ccaagatcag ggccagaaat atcgattgag atgatcctac aagcagcaca gccaaaactg      1440
     cagccattcc ccttccagga gcacaccgac ctgccagtag gccctactgg tggcatgggt      1500
     gggcaggctg aaggccccac ctgtggcatg ggtgggcaag ttaaaggccc tactggtggc      1560
     atgggtgggc aggctgaaga ccctactagt ggcatgggtg gggagctccc tgccaccatg      1620
     taatggaacc tttatgattt actacccttt atgttgtgtg tgagtgtgac agagaaacct      1680
     ttctctgcct tattaataat aaataaagca catc                                  1714
//
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