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EBI DbfetchID AF401040; SV 1; linear; genomic DNA; STD; PRO; 2417 BP. XX AC AF401040; XX DT 21-AUG-2001 (Rel. 68, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Lactobacillus sakei UDP-galactose 4-epimerase (galE) gene, partial cds; DE galactose 1-phosphate-uridyltransferase (galT) gene, complete cds; and DE mutarotase (galM) gene, partial cds. XX KW . XX OS Lactobacillus sakei OC Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. XX RN [1] RP 1-2417 RX PUBMED; 11832506. RA Dudez A.M., Chaillou S., Hissler L., Stentz R., Champomier-Verges M.C., RA Alpert C.A., Zagorec M.; RT "Physical and genetic map of the Lactobacillus sakei 23K chromosome"; RL Microbiology (Reading, Engl.) 148(Pt 2):421-431(2002). XX RN [2] RP 1-2417 RA Dudez A.-M., Chaillou S., Zagorec M.; RT ; RL Submitted (20-JUL-2001) to the EMBL/GenBank/DDBJ databases. RL Flore Lactique et Environnement Carne, INRA, Domaine de Vilvert, RL Jouy-en-Josas 78350, France XX FH Key Location/Qualifiers FH FT source 1..2417 FT /organism="Lactobacillus sakei" FT /mol_type="genomic DNA" FT /db_xref="taxon:1599" FT CDS <1..678 FT /codon_start=1 FT /transl_table=11 FT /gene="galE" FT /product="UDP-galactose 4-epimerase" FT /note="GalE; similar to GalE of Lactobacillus casei" FT /db_xref="GOA:Q93MM2" FT /db_xref="HSSP:1GY8" FT /db_xref="InterPro:IPR001509" FT /db_xref="UniProtKB/TrEMBL:Q93MM2" FT /protein_id="AAK92517.1" FT /translation="EFGVKRIVFSSTAATYGEPKAIPIKESDPQVPTNPYGESKLMMET FT MMKWADKAYGIKFVALRYFNVVGAKPDGSIGEDHHPETHLLPIVLQVAAGKRDQLSIFG FT DDYDTPDGTNVRDYVHVLDLADAHILAFEYLKDGHDSNAFNLGSSTGFSNMEIVEAARK FT VTGKAIPVTMAPRRAGDPSTLIAASDKARETLGWAPKYDNMEAIIETAWNWHLNHPNGY FT ADR" FT RBS 677..683 FT /gene="galT" FT CDS 689..2185 FT /codon_start=1 FT /transl_table=11 FT /gene="galT" FT /product="galactose 1-phosphate-uridyltransferase" FT /note="GalT; similar to GalT of Lactobacillus casei" FT /db_xref="GOA:Q93MM1" FT /db_xref="InterPro:IPR005849" FT /db_xref="UniProtKB/Swiss-Prot:Q93MM1" FT /protein_id="AAK92518.1" FT /translation="MQARELIQKFITKVSTFPETTYTAEDEQYLFNVVLDLVGEGDETP FT VVAQETTTLIDLKEALVQLAVDHQRIQDLAAERDILGAKLMDLVTPLPSAVNKRFWTLY FT EKDPEKALAYFYELSQANDYIKVAAIAKNIAYDVPTKYGDLEITINLSKPEKDPKQIAL FT AKTMKQTGYPKCQLCLENEGYAGRLDFPARRNHRIVRFDLEQQTWGFQYSPYAYFNEHS FT IFLDGKHEPMVIDQTTFKNLLQIVKQFPGYFAGSNADLPIVGGSILTHEHYQGGRHDFP FT MAKAPISTPLQFAGYDDIQAGIVEWPMSVMRLTGSDAKRIETLAADILTKWQHYSDPEV FT QVLAQEADGTPHHTITPIARMRGDQYEIDLVLRDNQTSPEHPDGIYHPHADVQHIKKEN FT IGLIEVMGLAILPPRLKSEMAEVEKYLCDQPNEMAAYHKTWADQIKADHSAITPANVTT FT LVQNEVGKVFMRVLEDAGVFKRDAKGQAAFIKFTERVNNA" FT RBS 2218..2224 FT /gene="galM" FT CDS 2231..>2417 FT /codon_start=1 FT /transl_table=11 FT /gene="galM" FT /product="mutarotase" FT /note="GalM; similar to GalM of Lactobacillus helveticus" FT /db_xref="GOA:Q93MM0" FT /db_xref="InterPro:IPR014718" FT /db_xref="UniProtKB/TrEMBL:Q93MM0" FT /protein_id="AAK92519.1" FT /translation="MKYWRQEFGTINGQTVWQHWLENSQGYQLAVIDYGATITNLVMPD FT KAGQFKNVVIGYDNLAD" XX SQ Sequence 2417 BP; 749 A; 489 C; 550 G; 629 T; 0 other; gaattcggcg ttaaacggat cgtcttttca tcaacggcgg cgacttatgg ggaacctaag 60 gcaattccaa ttaaggaatc cgacccacaa gtaccaacca atccttacgg tgagagtaag 120 ttgatgatgg aaacaatgat gaagtgggcc gataaagctt acggcatcaa atttgtcgcc 180 ttacgctatt tcaacgttgt tggtgccaaa ccagatgggt caattgggga agatcatcat 240 ccagaaacgc acttgttacc aatcgtgtta caagtcgctg ctggcaaacg tgatcaatta 300 tcaatctttg gtgacgacta cgatacgcca gatggcacaa acgtccgcga ttacgtacac 360 gttttagatt tagcggacgc gcacatcttg gcctttgaat atctcaaaga cggccatgat 420 agcaacgcct ttaacttggg ctcatcaact ggcttttcaa atatggaaat tgtcgaagct 480 gctcgtaaag tgactggcaa ggcaattcct gtgacgatgg ctcctcgtcg tgccggtgat 540 ccaagtacat tgattgccgc aagtgacaaa gcgcgtgaaa cgcttggctg ggcccctaaa 600 tatgacaata tggaagcaat tattgaaacc gcatggaatt ggcacttaaa ccatcctaat 660 ggttatgcag atcggtagag gaaagaatat gcaagcaaga gaattgattc aaaagtttat 720 tacaaaagtc agcacttttc cagaaacaac ttatacggct gaagatgaac aatatttatt 780 taatgttgtc ctcgacttag ttggcgaagg tgatgaaaca ccagttgttg cacaagagac 840 gacaactttg attgacttga aagaagcgtt ggtccaattg gcagttgatc atcagcgtat 900 tcaagattta gcggctgaac gcgatatttt gggcgctaag ttgatggatt tggtgacacc 960 attgccaagt gccgttaaca agcgtttttg gacgttatac gaaaaggatc ccgaaaaggc 1020 gttggcttat ttctacgaat taagccaagc caacgattat atcaaggttg ccgcaatcgc 1080 gaagaatatc gcttatgatg tccccactaa atatggcgat ttagaaatta cgattaacct 1140 ctcaaagcct gaaaaagatc ctaagcaaat tgcgttagct aaaacgatga aacaaacggg 1200 ttatcctaaa tgtcaacttt gtttagaaaa tgaagggtat gcgggtcggt tggatttccc 1260 agcgcggcgt aatcatcgca ttgtgcgctt tgatttagaa caacaaacat ggggcttcca 1320 gtattcgcca tatgcttatt tcaatgaaca ttcaatcttc ttggatggca aacacgaacc 1380 aatggtgatt gatcaaacca cgtttaaaaa cctactacaa attgttaagc agttccctgg 1440 ctactttgcc gggagtaacg ctgatttgcc tatcgtaggg ggctcaattt taacgcatga 1500 acattatcaa ggtggccggc atgattttcc aatggccaaa gcaccaatca gcacaccact 1560 tcaatttgcg ggttatgatg atattcaagc cggaattgtt gaatggccaa tgtcggttat 1620 gcgcttgacg ggtagtgatg ctaaacgcat tgaaacactt gccgctgata ttttgactaa 1680 gtggcaacac tacagtgatc cagaagtcca agtcttagcg caagaagcag acgggacacc 1740 gcatcacacc atcacaccga ttgcgagaat gcgtggggat caatatgaaa ttgatttggt 1800 cttacgtgac aatcaaacat cgccagaaca tccagatggt atttatcatc cacacgcaga 1860 tgtccaacat attaaaaaag aaaatattgg tttaatcgaa gtcatgggtt tagcgattct 1920 accaccacgt ttgaagtctg aaatggcaga agttgaaaaa tacctctgtg atcaaccaaa 1980 tgaaatggcc gcttatcaca aaacatgggc cgaccaaatc aaggctgatc attcagcaat 2040 cacaccagcc aatgttacaa cattggttca aaatgaagtc ggtaaagtct tcatgcgtgt 2100 tttagaagat gcgggtgtct tcaagcgcga tgcaaaagga caagcagcat ttatcaaatt 2160 tacagagcgt gtcaataacg cctaaaaagc gttgctgaca acctgttaaa aatcaattgg 2220 aggtcaagtc atgaaatatt ggcgtcagga atttgggacg attaatggtc agactgtttg 2280 gcaacattgg ttagaaaata gtcagggcta tcaattagca gttatcgatt atggggcaac 2340 catcacgaat ttagtgatgc ccgataaggc gggacaattt aaaaacgtgg tgatcggtta 2400 cgataattta gcggatt 2417 // |
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