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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF394924; SV 1; linear; mRNA; STD; MAM; 1565 BP.
XX
AC   AF394924;
XX
DT   24-SEP-2001 (Rel. 69, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 2)
XX
DE   Bos taurus alpha(1-2) fucosyltransferase sec1 (sec1) gene, exon 3 and
DE   complete cds.
XX
KW   .
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RP   1-1565
RX   PUBMED; 11606704.
RA   Saunier K., Barreaud J.P., Eggen A., Oriol R., Leveziel H., Julien R.,
RA   Petit J.-M.;
RT   "Organization of the bovine alpha 2-fucosyltransferase gene cluster
RT   suggests that the Sec1 gene might have been shaped through a nonautonomous
RT   L1-retrotransposition event within the same locus";
RL   Mol. Biol. Evol. 18(11):2083-2091(2001).
XX
RN   [2]
RP   1-1565
RA   Saunier K., Barreaud J.P., Eggen A., Oriol R., Leveziel H., Julien R.,
RA   Petit J.-M.;
RT   ;
RL   Submitted (26-JUN-2001) to the EMBL/GenBank/DDBJ databases.
RL   Unite de Genetique Moleculaire Animale, UR1061, Faculte des Sciences, 123,
RL   Avenue Albert Thomas, Limoges 87060, France
XX
DR   Ensembl-Gn; ENSBTAG00000014514; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000019293; Bos_taurus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1565
FT                   /organism="Bos taurus"
FT                   /chromosome="18"
FT                   /map="18q24"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:9913"
FT   exon            1..1565
FT                   /gene="sec1"
FT                   /number=3
FT   CDS             27..1133
FT                   /codon_start=1
FT                   /gene="sec1"
FT                   /product="alpha(1-2) fucosyltransferase sec1"
FT                   /db_xref="GOA:Q9TTY3"
FT                   /db_xref="InterPro:IPR002516"
FT                   /db_xref="UniProtKB/TrEMBL:Q9TTY3"
FT                   /protein_id="AAL06322.1"
FT                   /translation="MWDMRAVAPQRPAAGHPRAGWPRKLKTAATRFWATCPSSSTVCFL
FT                   FVIFAVSTVFHCHRRLALVPAPWAYAGHVVLFPRHLPRGGVFTINAKGRLGNQMGEYAT
FT                   LYALAKMNGRAAFIPPQMHSTLAPIFRITLPVLHDATARSVPWQNYHLNDWMEEQYRHI
FT                   PGEYVRLTGYPCSWTFYHHLRAEILQEFTLHAHVREEAQNFLRGLRVNGSRPSTYVGVH
FT                   VRRGDYVRVMPTMWKGVLADRGYLQQALDWFRARHHSPLFVITSDDMAWCRRNINSSHR
FT                   DVVFAGSGQQGSPARDFALLTQCNHTVITVGTFGIWAAYLAGGSTVYLANFTLPGSRFR
FT                   MIFKPQAAFLPEWVGIAANLGQARESHP"
XX
SQ   Sequence 1565 BP; 268 A; 528 C; 457 G; 312 T; 0 other;
     ccctggcagc cataccaccc gggacgatgt gggacatgag agccgttgcc ccgcagcggc        60
     ccgcagctgg acatccccga gcaggctggc ccaggaagct caagacagcc gccacgagat       120
     tctgggccac ctgcccttcc tcatccaccg tctgcttcct ctttgtcatc tttgcggtgt       180
     ccactgtttt ccactgccac cggcgcctgg ccctggtgcc cgccccttgg gcctatgcag       240
     gtcacgtggt cttgttcccc agacacctgc cgaggggggg cgtgttcacc atcaacgcca       300
     aaggccgcct ggggaaccag atgggggagt acgccaccct gtacgccctg gccaagatga       360
     acgggcgcgc cgccttcatc ccgccccaga tgcacagcac gctggccccc atcttccgaa       420
     tcacactccc ggtcctgcac gacgccacgg ccaggagcgt cccctggcag aactaccacc       480
     tgaacgactg gatggaggag cagtaccgcc acatcccggg ggagtacgtg cgcctcaccg       540
     gctacccctg ctcctggacc ttctaccacc acctccgcgc cgagatcctc caggagttca       600
     ccctgcacgc ccacgtgcgt gaggaggccc agaacttcct gcggggtctg cgggtgaatg       660
     gcagtcggcc gagcacctac gtgggggtcc acgtgcgccg tggggactat gtccgagtca       720
     tgcccaccat gtggaagggt gtgctggccg accggggcta cctgcagcag gccctggact       780
     ggttccgcgc tcgccaccac agcccgctct ttgtgatcac cagcgacgac atggcctggt       840
     gccggaggaa catcaacagc tcccaccggg acgtggtgtt cgcgggcagc ggccagcagg       900
     gctcgccggc cagggacttc gcgctcctca cgcagtgtaa ccacaccgtc atcactgtgg       960
     gcaccttcgg tatctgggcc gcctacctcg ctggggggag caccgtctac ctggccaact      1020
     tcaccctgcc cggctcccga ttccgcatga tctttaagcc ccaggcggcc ttcctgcccg      1080
     agtgggtggg catcgcagcc aacctggggc aggccagaga gagccacccc tagccccgct      1140
     cgggtccctg ccgccccatc gggcccaaca ggcttggatg ccggagtcta aatccaggct      1200
     gttcagcttc ccagctgggt gaccatggac aagtgactta atctctatgt gtcttagtgt      1260
     tccacctgtg aaacgaacct aacgcaggct ccttctgaga acacgcgttc atgtagttcc      1320
     ttggaaacag gtgtgagggt tggccactca caggtttgtg attggcaggc ctgggccttt      1380
     ggacggcctt gcagtggaca cgtatttttg ccctctcctt ctttatagct ccgggaacat      1440
     ggagcccaaa catttggtac ttgcctcttt ggagggtttg gcaatgacac ttttcctgcc      1500
     ctcgattggg ctgtttgagg cggctaaaaa attcgggctt tgggtttgat ggggccttag      1560
     attgt                                                                  1565
//
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