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EBI DbfetchID AF370128; SV 1; linear; mRNA; STD; PLN; 2121 BP. XX AC AF370128; XX DT 01-MAY-2001 (Rel. 67, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Arabidopsis thaliana unknown protein (At5g43710) mRNA, complete cds. XX KW FLI_CDNA. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RP 1-2121 RA Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., RA Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., RA Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., RA Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., RA Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT "Arabidopsis Full Length cDNA Clones"; RL Unpublished. XX RN [2] RP 1-2121 RA Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., RA Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., RA Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., RA Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., RA Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.; RT ; RL Submitted (18-APR-2001) to the EMBL/GenBank/DDBJ databases. RL Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA XX CC RIKEN Genomic Sciences Center (GSC) members carried out the CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., CC Hayashizaki,Y. and Shinozaki,K. CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the CC sequencing and annotation of the RAFL cDNAs: Yamada,K., Liu,S.X., CC Sakano,H., Pham,P.K., Banh,J., Chung,M.K., Goldsmith,A.D., CC Lee,J.M., Quach,H.L., Toriumi,M., Yu,G., Bowser,L., Chen,H., CC Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., Lam,B., Lin,J., CC Miranda,M., Nguyen,M., Palm,C.J., Shinn,P., Southwick,A., CC Davis,R.W., Ecker,J.R. and Theologis,A. CC Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to CC this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) CC contributed equally to this work as PIs. CC Annotation is based on the January 2002 version of the Arabidopsis CC genome submitted to Genbank. XX FH Key Location/Qualifiers FH FT source 1..2121 FT /organism="Arabidopsis thaliana" FT /chromosome="5" FT /mol_type="mRNA" FT /clone="RAFL09-17-G20 (R09215)" FT /note="This clone is in a modified pBluescript vector FT (FLC-1) as a BamHI/XhoI insert. ecotype: Columbia" FT /db_xref="taxon:3702" FT 5'UTR 1..106 FT /gene="At5g43710" FT CDS 107..1981 FT /codon_start=1 FT /gene="At5g43710" FT /product="unknown protein" FT /db_xref="GOA:Q9FG93" FT /db_xref="HSSP:1FMI" FT /db_xref="InterPro:IPR001382" FT /db_xref="UniProtKB/TrEMBL:Q9FG93" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAK43943.1" FT /translation="MDSNFKWLLFAILISLTFSGFVLHHGVLAESVKPDEAKQLRDEVR FT GMFYHAFDGYMNNAFPLDELRPLSCQGEDTLGGYALTLIDSLDTLALLGDRERFTSSVE FT WIGKNLQFNINKTVSVFETTIRVLGGLLSAHLIASDYATGMRIPSYNNELLVLAENLAR FT RMLPAFDTPTGIPFGSVNLMYGVDKHESKITSTAGGGTLSLEFGVLSRLTNDPVFEQVA FT KNAVRGLWARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYILFGDEEYL FT YIFQEAYRSAMQYLHKDPWYVEVNMDSAAIVWPVFNSLQAFWPGLQVLAGDVDPAIRTH FT TAFFSVWKRYGFTPEGFNLATLSVQYGQKSYPLRPELIESTYWLYKATRDPRYLDAGRD FT FVASLQYGAKCPCGYCHITDVELHKQEDHMESFFLAETVKYLWLLFDLAVDSDNLVDNG FT PYKYIFSTEGHLLPITPQISLAREHCSYFGGYCPSNSTKLEQEVLGEDSSNDDHSNDYP FT YHESFPVTGLIKGLCPGLTHAQKYGFSYVLPEKTDREDVNQPKPVVTSSSIVLISDQTV FT EKRPQEEEGFTSQSEPIMTISGGSSNDQTGQELTLLESETDDQRSYSS" FT 3'UTR 1982..2121 FT /gene="At5g43710" FT misc_difference 2104 FT /gene="At5g43710" FT /note="not present in genomic sequence" XX SQ Sequence 2121 BP; 629 A; 407 C; 454 G; 631 T; 0 other; agttgaaaaa ctcaagaatc tcctcggaca agagcagaga tccagagtga tgtctgagaa 60 gattcattca acacattaac gaaactcccc aaaatagctt ttattgatgg actcaaattt 120 caagtggctt ttgtttgcca tcttgatctc tctgacattt tcgggttttg ttcttcacca 180 tggagttctc gctgaaagtg ttaagcctga tgaagctaaa cagcttagag acgaggtacg 240 tgggatgttt tatcatgcct ttgatggata tatgaacaat gcgtttccac tcgatgaatt 300 gagaccgtta tcttgccaag gagaagatac tcttggaggc tatgcgttga ctctgattga 360 ctcgttggat acattagctt tacttggtga ccgagagcgc ttcacttctt ctgttgaatg 420 gattggtaaa aatcttcagt ttaatataaa taaaacagtc tctgtgtttg agacaactat 480 ccgagtcctt ggggggttac tatctgctca tctgattgca agtgattatg caacgggcat 540 gagaattcca tcttacaaca atgaattact agttttggct gagaatttgg cacggagaat 600 gcttcctgca tttgatacac cgactggaat cccatttgga tctgtgaatt tgatgtacgg 660 tgttgacaaa catgaaagca agataacatc aactgccggt ggtggtactt tgtctttaga 720 gtttggcgtg cttagtcgtt taacaaatga tcctgttttc gaacaagttg caaagaatgc 780 ggtgagggga ctatgggcac gtcgttcaaa tctcgacttg gttggtgctc acatcaatgt 840 ctttacaggt gaatggacac agaaggatgc tggtatagga acaagcattg attccttcta 900 tgagtatcta ctcaaggctt atatactatt tggggatgag gaatatctat acatttttca 960 agaagcttat agatctgcaa tgcagtacct tcacaaggat ccttggtatg tagaagtcaa 1020 tatggattcc gcagctattg tctggccagt atttaacagc cttcaagctt tctggccagg 1080 acttcaggtt ttagctggag acgttgatcc agcaataaga actcacactg ccttctttag 1140 cgtctggaaa cgatatggtt tcacccctga gggttttaat cttgctacac ttagtgtcca 1200 gtatgggcaa aagagttatc ccttaaggcc ggaattaatc gagagtacat actggttgta 1260 caaagctacc agagatccca ggtatcttga tgcaggacgt gactttgtgg ctagtttgca 1320 atacggggca aaatgtcctt gcggttattg tcacatcaca gatgtagaac tgcataaaca 1380 agaagatcac atggagagct tcttcctcgc agaaacggtg aagtacttat ggctactctt 1440 tgacttagct gttgactcgg ataacctcgt agacaatggc ccttacaagt acatcttcag 1500 tactgagggt catctcttac caataacacc acaaatatct ctagctcggg aacattgctc 1560 ttactttggt ggatactgtc caagcaattc cacaaaacta gaacaagaag tccttggaga 1620 agacagtagt aacgatgatc acagtaacga ttatccttac cacgaatctt ttccagttac 1680 cggtttgata aagggtttat gtccaggact aacacatgct cagaaatatg gtttttcgta 1740 tgttctaccg gagaagacag atcgtgaaga tgttaatcaa cctaaaccgg tagttacaag 1800 cagttcaatt gtgttaatct cggatcaaac agtggagaag agaccacagg aagaagaagg 1860 atttacttct cagtctgaac caataatgac aatctctggt ggtagtagca acgaccaaac 1920 aggtcaagag ctaaccttgt tagagtcaga aactgatgat caaagatcat actcttctta 1980 aatctctcat ttatatatat gttccacaga agaagattac aaaaactttt gttagaaata 2040 tagattcagt tttccaatct catcaagaat cttgaatcct tcttttgttg atcgattgtt 2100 gtccaaaaaa aaaaaaaaaa a 2121 // |
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