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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF368156; SV 1; linear; genomic DNA; STD; MAM; 942 BP.
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AC   AF368156;
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DT   02-SEP-2002 (Rel. 72, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 4)
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DE   Callimico goeldii lysozyme gene, intron 3 and partial cds.
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KW   .
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OS   Callimico goeldii (Goeldi's marmoset)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC   Callitrichinae; Callimico.
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RN   [1]
RP   1-942
RX   DOI; 10.1016/S1055-7903(02)00312-3
RX   PUBMED; 12644406.
RA   Singer S.S., Schmitz J., Schwiegk C., Zischler H.;
RT   "Molecular cladistic markers in New World monkey phylogeny (Platyrrhini,
RT   Primates)";
RL   Mol. Phylogenet. Evol. 26(3):490-501(2003).
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RN   [2]
RP   1-942
RA   Singer S.S., Schmitz J., Schwiegk C., Zischler H.;
RT   ;
RL   Submitted (05-APR-2001) to the EMBL/GenBank/DDBJ databases.
RL   Primate Genetics, German Primate Center, Kellnerweg 4, Goettingen D-37077,
RL   Germany
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FH   Key             Location/Qualifiers
FH
FT   source          1..942
FT                   /organism="Callimico goeldii"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9495"
FT   mRNA            join(<1..59,916..>942)
FT                   /product="lysozyme"
FT   CDS             join(<1..59,916..>942)
FT                   /codon_start=1
FT                   /product="lysozyme"
FT                   /db_xref="HSSP:133L"
FT                   /db_xref="InterPro:IPR001916"
FT                   /db_xref="UniProtKB/TrEMBL:Q8MJP2"
FT                   /protein_id="AAN01100.1"
FT                   /translation="TEAVACAKRVVRDPQGIRAWVAWKAHCQ"
FT   exon            <1..59
FT                   /number=3
FT   intron          60..915
FT                   /number=3
FT   repeat_region   337..352
FT                   /rpt_type=DIRECT
FT                   /note="Alu insertion target sequence"
FT   repeat_region   353..638
FT                   /rpt_family="Alu"
FT                   /rpt_type=DISPERSED
FT   repeat_region   639..654
FT                   /rpt_type=DIRECT
FT                   /note="Alu insertion target sequence"
FT   exon            916..>942
FT                   /number=4
XX
SQ   Sequence 942 BP; 285 A; 166 C; 200 G; 291 T; 0 other;
     actgaagctg tggcctgtgc aaagagggtt gtccgtgatc cacaaggcat tagggcatgg        60
     tatgttttaa gtgttaaaag ggaaaactat tttactctac tgttgatatg tacaatggga       120
     gcagattttc aaagaccgaa gtatgctaat gacacctgaa aattgcagct tttggcttat       180
     gctaaataac atattaccta catccttgaa aaacaatcta ctttaactga tccagaattt       240
     tacttttttt actcttcaat ttattttagg ggatttctag agttttaagg ttcttcacac       300
     tctaccagtt ccttgtcata tcttgaaatt ctttttagaa taagtaaatg tgggcagagc       360
     atagttcacg cctgtaatcc cagcactttg ggaggccaag gcaggtgaat cacctcagtt       420
     tgagaccagc ctggctaaca tggcaaaacc ccatctctac taaaaataca aaaaattagc       480
     tgggtatggt ggcgggtgtc tgtaattcca gctactcagg aggctgagag ggagaattgc       540
     ttgaacctga ggggggaagg ttgcagagat tgtgccattg cactccagcc tgggcaacag       600
     agtgagactc tgtctcaaaa aaaaaaaaaa aaaaagagag aataagtaaa tgtggaattt       660
     actttgcagt tgctgctgta caatgcacat tactcactct ttatgttcag cattctatac       720
     tctactggga gatttaggga ggagtgaaat actttgtgca catagatagc ttcatttaat       780
     aagtagcaat agctgggtct atcttagcat tttatctatt ggcaaaatat tttgtttccc       840
     caaggtgtat gaagtatata tattacagtg aagatatgtg ttaacctttc accatttgct       900
     tcatcttttc tacagggtgg catggaaagc tcattgtcaa aa                          942
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