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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF363792; SV 1; linear; mRNA; STD; VRT; 1722 BP.
XX
AC   AF363792;
XX
DT   17-APR-2001 (Rel. 67, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Caiman crocodilus apaporiensis L-lactate dehydrogenase A (LDH-A) mRNA,
DE   complete cds.
XX
KW   .
XX
OS   Caiman crocodilus apaporiensis
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Crocodylidae; Alligatorinae; Caiman.
XX
RN   [1]
RP   1-1722
RX   DOI; 10.1016/S0378-1119(01)00746-6
RX   PUBMED; 11722846.
RA   Liao C.H., Ho W.Z., Huang H.W., Kuo C.H., Lee S.C., Li S.S.;
RT   "Lactate dehydrogenase genes of caiman and Chinese soft-shelled turtle,
RT   with emphasis on the molecular phylogenetics and evolution of reptiles";
RL   Gene 279(1):63-67(2001).
XX
RN   [2]
RP   1-1722
RA   Liao C.-H., Ho W.-Z., Huang H.-W., Kuo C.-H., Lee S.-C., Li S.S.-L.;
RT   ;
RL   Submitted (26-MAR-2001) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Biomedical Sciences, National Sun Yat-Sen University, 70
RL   Lien-hai Rd., Kaohsiung 804, Taiwan
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1722
FT                   /organism="Caiman crocodilus apaporiensis"
FT                   /sub_species="apaporiensis"
FT                   /mol_type="mRNA"
FT                   /tissue_type="muscle"
FT                   /db_xref="taxon:157164"
FT   5'UTR           1..78
FT                   /gene="LDH-A"
FT   CDS             79..1077
FT                   /codon_start=1
FT                   /gene="LDH-A"
FT                   /product="L-lactate dehydrogenase A"
FT                   /db_xref="GOA:Q98SL2"
FT                   /db_xref="InterPro:IPR001236"
FT                   /db_xref="InterPro:IPR001557"
FT                   /db_xref="InterPro:IPR011304"
FT                   /db_xref="InterPro:IPR015955"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="InterPro:IPR018177"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q98SL2"
FT                   /protein_id="AAK37570.1"
FT                   /translation="MSVKEHLIHNVHKEEHGHAHNKITVVGVGAVGMACAISILMKDLA
FT                   DELALVDVVEDKLRGEMLDLQHGSLFLRTPKIVSGKDYSVTANSKLVIITAGARQQEGE
FT                   SRLNLVQRNVNIFKFIIPNVVKHSPDCKLLVVSNPVDILTYVAWKISGFPKHRVIGSGC
FT                   NLDSARFRYLMGERLGIHPLSCHGWIVGEHGDSSVPVWSGVNVAGVSLKALHPELGTDA
FT                   DKEHWKEVHKEVVDSAYEVIKLKGYTSWAIGLSVADLAETVMKNLRRVHPISTMVKGMY
FT                   GIKDDVFLSVPCVLGYHGITDVVMMTLKSEEEEKIRKSADTLWGIQKELQF"
FT   3'UTR           1078..1722
FT                   /gene="LDH-A"
FT   polyA_signal    1704..1708
FT                   /gene="LDH-A"
XX
SQ   Sequence 1722 BP; 476 A; 369 C; 412 G; 464 T; 1 other;
     cggtactgca gcagcggagg caccggctac aagagcacag cccgacccga cccgacccga        60
     cccgacccgc tttacacaat gtctgtcaag gagcatctga ttcacaatgt tcacaaggaa       120
     gagcatggtc atgcccacaa caagattact gttgttgggg ttggtgcagt tggcatggct       180
     tgtgcaatca gcatcctgat gaaggatttg gctgatgaac tggctcttgt tgatgttgtg       240
     gaggacaagc tgagaggaga gatgctggat ctccagcatg gcagcctttt tctaaggaca       300
     ccaaagatag tgtctggcaa agactacagt gtgactgcaa actccaagct ggttatcatc       360
     acagctggtg ctcgtcagca ggaaggggaa agtcgcctta acctggtcca gcgcaatgtg       420
     aacatcttca aattcatcat tcccaatgtt gttaaacaca gccctgactg caaactactc       480
     gttgtctcaa atccagtgga tattttgacc tacgtggctt ggaaaatcag cggctttccc       540
     aaacatcgtg ttatcggtag tggctgcaac ctggattctg ctcgtttccg ctatctcatg       600
     ggagaaagac tgggcatcca tcctctgagc tgccatgggt ggattgttgg agagcatggt       660
     gactctagtg tacctgtctg gagtggggtg aatgttgctg gtgtttccct gaaggctttg       720
     caccctgagt tgggaactga tgcagacaag gaacactgga aggaggttca caaggaggtg       780
     gtggacagtg cttatgaggt aatcaagttg aagggataca cgtcatgggc tattggactc       840
     tctgtagcag acttggctga aactgttatg aagaacctaa gaagggtgca cccaatttct       900
     accatggtta agggcatgta tggaataaaa gatgatgtct tcctaagtgt cccttgtgtg       960
     ttgggatacc atggtattac agatgtagtg atgatgactc tgaagagcga ggaggaggag      1020
     aagataagga agagtgcaga tacactttgg ggaatccaga aggaactgca gttttaaatc      1080
     taatgtccta gcacttaact attaacagtc taatgggttt agtgaattaa tctatgttgc      1140
     actgcgagta tgtcagctcc ttttatgtac tgattagaaa cgcacagaga gctaaactcc      1200
     tatttgagtt ggaagctgta ttctagggtt tttctgttca ccaaagccca ggtttatagc      1260
     cagaggtgga tcacaaccta gtcctataca gttaagtgtt gtaaagtaaa tccagcactc      1320
     tgtaaagcag cactgccctg tcaaacacct taccttgcct tttttcccct cacctaagag      1380
     cttaatgtca gttcagaaga atacacaact tgttacacaa ctgcaaagcc aaagaatatt      1440
     ctcttgtaat caaaaagcat tggcaagcag actctgacca acctttcctg ctgactggta      1500
     gcttcctggt ttttcctgtt agcaggtatt ctcaacacat gcagagtttt tgtgcgtatt      1560
     cttcctagag aactttattt ttgtgtacaa tagcagagta gttataaaca tttcctagat      1620
     atgtaataaa ataaaaccca ggacttctgt atgcaaccaa ggcagcctca aatatccagc      1680
     tgtngtacca gcctacacac caaaataaac tacaaactcc tt                         1722
//
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