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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF352050; SV 1; linear; genomic DNA; STD; PRO; 726 BP.
XX
AC   AF352050;
XX
DT   26-APR-2001 (Rel. 67, Created)
DT   31-AUG-2001 (Rel. 69, Last updated, Version 3)
XX
DE   Prochlorococcus marinus phycocyanobilin:ferredoxin oxidoreductase (pcyA)
DE   gene, complete cds.
XX
KW   .
XX
OS   Prochlorococcus marinus
OC   Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.
XX
RN   [1]
RP   1-726
RX   DOI; 10.1105/tpc.13.4.965
RX   PUBMED; 11283349.
RA   Frankenberg N., Mukougawa K., Kohchi T., Lagarias J.C.;
RT   "Functional genomic analysis of the HY2 family of ferredoxin-dependent
RT   bilin reductases from oxygenic photosynthetic organisms";
RL   Plant Cell 13(4):965-978(2001).
XX
RN   [2]
RP   1-726
RA   Lagarias J.C., Frankenberg N.;
RT   ;
RL   Submitted (21-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL   Section of Molecular & Cellular Biology, University of California Davis,
RL   One Shields Avenue, Davis, CA 95616, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..726
FT                   /organism="Prochlorococcus marinus"
FT                   /map="on JGI contig 26"
FT                   /strain="MED4"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1219"
FT   CDS             1..726
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pcyA"
FT                   /product="phycocyanobilin:ferredoxin oxidoreductase"
FT                   /db_xref="GOA:Q93TL5"
FT                   /db_xref="InterPro:IPR009249"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q93TL5"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAK38599.1"
FT                   /translation="MLSKSLTKTKLIDPLILTLLQNIKVQRSKLNDLNCIEVDPKLSNI
FT                   ISNEEGKELYIENEFYKAKGFRKLHIEVAEFSKSLKILHCVFFPDPKYDIPIFGMDLVK
FT                   VNELVSAAIVDLSPSSKNQNLKYDHLLSHIDKSVFKSKREIPIWGNIFSKNVFFASLKN
FT                   ESEKNAFCKIVDNYLSVLIQLSQSTSPDSDYEIIEERINYQKNYCVQQMKNEKTSLVLL
FT                   KYFDKVWVDEYIKKVLFDF"
XX
SQ   Sequence 726 BP; 279 A; 81 C; 106 G; 260 T; 0 other;
     ttgttgtcta aatctttaac caaaactaaa ttaattgacc cacttatttt gactttattg        60
     caaaatataa aggttcaaag gtctaagctt aatgacctca attgcataga ggtagatcct       120
     aagctttcaa atataatttc caatgaagaa ggtaaggagc tatatataga aaatgaattt       180
     tataaagcaa aaggatttag aaagttacat attgaagtgg ctgaattttc aaaaagtcta       240
     aagattctac attgcgtatt tttcccagac ccaaagtatg atattccaat atttggaatg       300
     gatttagtta aagttaatga actagtttca gcagctattg ttgatttatc tccttcatcg       360
     aagaaccaaa atttaaaata tgatcattta ttgtctcata ttgataaaag tgtttttaaa       420
     tctaaaaggg aaattccaat ctggggaaat attttctcta aaaatgtttt ttttgcttcc       480
     ttaaaaaatg aaagtgaaaa aaatgctttt tgtaaaatag ttgataatta tctttctgtt       540
     ttaattcaat taagtcaaag cactagtcct gattctgatt atgaaataat tgaagaaaga       600
     attaattatc aaaaaaatta ttgtgttcag caaatgaaaa acgaaaaaac aagtttagtt       660
     ttgcttaaat attttgataa agtatgggta gatgaatata tcaaaaaagt attatttgat       720
     ttttga                                                                  726
//
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