EBI Dbfetch

ID   AF319168; SV 1; linear; mRNA; STD; PLN; 1980 BP.
XX
AC   AF319168;
XX
DT   05-DEC-2001 (Rel. 70, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Brassica napus putative chloroplast-targeted beta-amylase (bmy) mRNA,
DE   complete cds.
XX
KW   .
XX
OS   Brassica napus (rape)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Brassica.
XX
RN   [1]
RP   1-1980
RA   Shin S.C., Kang Y.H., Lee S.Y.;
RT   "A novel beta-amylase gene of Brassica napus inducible by dehydration
RT   stress";
RL   Unpublished.
XX
RN   [2]
RP   1-1980
RA   Shin S.C., Kang Y.H., Lee S.Y.;
RT   ;
RL   Submitted (03-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Lab. of Biochemistry, Graduate School of Biotechnology, Korea University,
RL   1, 5-ka Anam-dong, Sungbuk-ku, Seoul 136-701, Rep. of Korea
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1980
FT                   /organism="Brassica napus"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:3708"
FT   CDS             90..1799
FT                   /codon_start=1
FT                   /gene="bmy"
FT                   /product="putative chloroplast-targeted beta-amylase"
FT                   /note="dehydration stress-inducible protein"
FT                   /db_xref="GOA:Q8W2D8"
FT                   /db_xref="HSSP:1B1Y"
FT                   /db_xref="InterPro:IPR001371"
FT                   /db_xref="InterPro:IPR001554"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="InterPro:IPR018238"
FT                   /db_xref="UniProtKB/TrEMBL:Q8W2D8"
FT                   /protein_id="AAL37169.1"
FT                   /translation="MAFNLTHQLGALAGTPIKSGEMTAPSAESSLSVSPPSARMPISMN
FT                   MNYTSNRNVSPPMSPVLGSRRADLSVACKAFAVETVEEQRTYKEGGIGGEKGKGGVPVF
FT                   VMIPLDSVTIGNTVNRRKAMRASLQALKSAGVEGIMIDVWWGLVEREAPGAYNWGGYNE
FT                   LLEMAKKVGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHE
FT                   HISLGADTLPVLKGRTPVQCYSDFMRAFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYP
FT                   EQDGHEVPRDWSLPVLRQDSLSSLKAAAEAYGKPEWGGTGPTDAGHYNNWPEDTQFFKK
FT                   EDGGWNTEYGDFFLTWYSQMLLDHGERILSSAKSIFQDTGVKISVKVAGIHWHYGTRSH
FT                   APELTAGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVA
FT                   LATLAAEVPLAGENALPRYEDYAHEQILKASALSFDQNSEGENREMCAFTYLRMNPELF
FT                   KADNWGKFVGFVKKMGEGRDSDRCREEVEREAEHFVHVTQPLVQEAAVALTH"
XX
SQ   Sequence 1980 BP; 528 A; 410 C; 571 G; 471 T; 0 other;
     taaaactcaa agcttctgaa tcaaatagag ggaaccaatt tgttatcgta acgatcgttt        60
     ttattttctc gagaaaattc gcagaagaaa tggcgtttaa tctaacgcat cagctcggag       120
     ctctcgccgg aactccgatc aagtcaggcg aaatgaccgc accatcggcc gaatcgtcgc       180
     tatccgtttc tccaccgtcg gcgaggatgc ctatatcgat gaacatgaat tacacctcga       240
     acagaaacgt atctccgccg atgagtccgg tcttgggatc gaggcgagcg gatctgtccg       300
     tggcgtgtaa agccttcgcg gtggagacag tggaggagca gaggacgtac aaggaaggag       360
     ggatcggagg agagaaaggg aagggaggag ttcctgtgtt cgtgatgata ccgcttgata       420
     gcgtgacgat agggaacact gtgaaccgga ggaaggcgat gagagcgagt ctccaggcgt       480
     tgaagagtgc tggtgttgaa gggatcatga tcgatgtgtg gtggggtttg gtggagaggg       540
     aggctcctgg ggcttataac tggggaggtt ataatgaact gcttgagatg gcgaagaagg       600
     ttggacttaa ggtgcaggct gttatgtcgt ttcatcagtg tggtggtaac gttggtgact       660
     ctgtcactat tcctttgcct cagtgggttg ttgaagaggt tgacaaggat ccagaccttg       720
     catatactga tcagtgggga agaaggaacc acgaacatat atcacttggc gctgatacac       780
     tcccagttct caaaggtaga acacccgtgc aatgctattc cgatttcatg cgtgctttca       840
     gagacaactt caagcatctt cttggagaca ccattgtgga aatccaagtg ggaatgggac       900
     cagcaggaga gctgcgttac ccttcatacc ccgagcaaga cggacatgag gttcccaggg       960
     attggagcct tccagtgcta cgacaagact cattaagcag cttgaaagca gcagctgaag      1020
     cttatgggaa gccagagtgg ggtggcactg gcccaaccga tgctggtcac tacaataact      1080
     ggccagaaga cactcagttc ttcaaaaaag aagacggtgg ttggaacaca gaatatggag      1140
     atttcttcct cacatggtat tcccagatgt tgctggatca tggcgagcgt atcctttcct      1200
     cagccaaatc gatattccaa gacacgggtg tcaaaatatc agtcaaagtc gctggaatcc      1260
     actggcatta cgggacacgc tctcacgccc ctgagctcac agcaggatac tacaacacta      1320
     ggttcagaga cggatacctt ccgatcgctc aaatgctagc cagacacaac gccatattca      1380
     acttcacctg tatcgagatg agagaccacg agcagcctca agatgcgctt tgtgcaccag      1440
     agaagctagt gaaccaggtg gctctagcta ctctagctgc agaagttcct ctagctggtg      1500
     aaaacgcatt gcctaggtat gaagactacg cgcacgagca gatcctcaag gcgtctgcgc      1560
     tgagctttga tcagaacagc gagggagaaa acagagagat gtgtgcgttt acttacctga      1620
     ggatgaatcc ggagctgttt aaggcggaca attgggggaa gtttgtaggg tttgtgaaga      1680
     aaatgggtga agggagagac tctgataggt gtcgggaaga agtggagcgt gaagctgaac      1740
     actttgtgca tgttactcag ccgctggttc aagaagctgc agtggctctc actcactaga      1800
     aagagcgcgc gattatggta tggttccacc ccatggttta tgttcgtaag cgatgtaatg      1860
     taaggattat tatgatgatg ccgaaaagat gtttaggcta aggttgtgta tgtatcggcg      1920
     gtataaaaaa tgatatgggc catagctgtg gttttttttg gtcagggttg tggcgtttgt      1980
//