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EBI DbfetchID AF317474; SV 1; linear; genomic DNA; STD; PRO; 4327 BP. XX AC AF317474; XX DT 02-NOV-2001 (Rel. 69, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Sinorhizobium meliloti adenylate kinase (adk), ribosomal protein S13 DE (rpsM), ribosomal protein S11 (rpsK), RNA polymerase alpha-subunit (rpoA), DE and ribosomal protein L17 (rplQ) genes, complete cds. XX KW . XX OS Sinorhizobium meliloti OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; OC Sinorhizobium/Ensifer group; Sinorhizobium. XX RN [1] RP 1-4327 RX DOI; 10.1128/JB.184.14.3808-3814.2002 RX PUBMED; 12081950. RA Peck M.C., Gaal T., Fisher R.F., Gourse R.L., Long S.R.; RT "The RNA polymerase alpha subunit from Sinorhizobium meliloti can assemble RT with RNA polymerase subunits from Escherichia coli and function in basal RT and activated transcription both in vivo and in vitro"; RL J. Bacteriol. 184(14):3808-3814(2002). XX RN [2] RP 1-4327 RA Peck M.C., Long S.R.; RT ; RL Submitted (30-OCT-2000) to the EMBL/GenBank/DDBJ databases. RL Biological Sciences, Stanford University, 371 Serra Mall, Stanford, CA RL 94305-5020, USA XX FH Key Location/Qualifiers FH FT source 1..4327 FT /organism="Sinorhizobium meliloti" FT /strain="1021" FT /mol_type="genomic DNA" FT /db_xref="taxon:382" FT CDS 281..859 FT /codon_start=1 FT /transl_table=11 FT /gene="adk" FT /product="adenylate kinase" FT /db_xref="GOA:Q93FE6" FT /db_xref="InterPro:IPR000850" FT /db_xref="InterPro:IPR006259" FT /db_xref="UniProtKB/Swiss-Prot:Q93FE6" FT /protein_id="AAL26898.1" FT /translation="MRLIFLGPPGAGKGTQAKLLTERYGIPQLSTGDMLRTAVAQATEV FT GKRAKAVMDAGQLVSDEIVNEIVSDRIDSADCARGFILDGYPRTVPQAVALDRMLEEKG FT LKLDAVIELKVDEAALVRRMENRVTETVAAGGTVRSDDNPEAFRRRLQEYREKTAPLSE FT HYARTGRLKTVDGMADVHTVTAEIEKILA" FT CDS 1089..1457 FT /codon_start=1 FT /transl_table=11 FT /gene="rpsM" FT /product="ribosomal protein S13" FT /db_xref="GOA:Q925X7" FT /db_xref="InterPro:IPR001892" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR018269" FT /db_xref="InterPro:IPR019980" FT /db_xref="UniProtKB/Swiss-Prot:Q925X7" FT /protein_id="AAL26899.1" FT /translation="MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIIEKVGIPAERRV FT HQLTDAEVLQIRETIDRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTH FT TNARTRKGPAKAIAGKKK" FT CDS 1684..2073 FT /codon_start=1 FT /transl_table=11 FT /gene="rpsK" FT /product="ribosomal protein S11" FT /db_xref="GOA:Q925W7" FT /db_xref="InterPro:IPR001971" FT /db_xref="InterPro:IPR018102" FT /db_xref="InterPro:IPR019981" FT /db_xref="UniProtKB/Swiss-Prot:Q925W7" FT /protein_id="AAL26900.1" FT /translation="MAKEATRVRRRERKNITSGVAHVNSSFNNTMITITDAQGNAIAWS FT SAGAKGFKGSRKSTPFAAQIAAEDCAKKAQEHGMKSLEVEVCGPGSGRESALRALQAAG FT FMITSIRDVTPIPHNGCRPRKKRRV" FT CDS 2177..3187 FT /codon_start=1 FT /transl_table=11 FT /gene="rpoA" FT /product="RNA polymerase alpha-subunit" FT /db_xref="GOA:Q925Z2" FT /db_xref="InterPro:IPR009025" FT /db_xref="InterPro:IPR011260" FT /db_xref="InterPro:IPR011261" FT /db_xref="InterPro:IPR011262" FT /db_xref="InterPro:IPR011263" FT /db_xref="InterPro:IPR011773" FT /db_xref="UniProtKB/Swiss-Prot:Q925Z2" FT /protein_id="AAL26901.1" FT /translation="MIQKNWQELIKPNKVEFASSGRTKATLVAEPLERGFGLTLGNALR FT RVLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVR FT KQGPGVVTAGDIQTVGDIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDA FT PIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQ FT DQLSVFVNFDEPQKETEEEAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLI FT QKTEAEMLRTPNFGRKSLNEIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQY" FT CDS 3233..3658 FT /codon_start=1 FT /transl_table=11 FT /gene="rplQ" FT /product="ribosomal protein L17" FT /db_xref="GOA:Q926A5" FT /db_xref="InterPro:IPR000456" FT /db_xref="UniProtKB/Swiss-Prot:Q926A5" FT /protein_id="AAL26902.1" FT /translation="MRHGKAGRKLNRTASHRKAMFANMAASLIEHEQIVTTLPKAKEIR FT PIVEKLVTLGKRGDLHARRQAISQIRDVAVVSKLFDAIASRYATRNGGYLRIMKAGFRQ FT GDNAPLAVIEFVDRDVDAKGSKDRARVSAEAEAAEAA" XX SQ Sequence 4327 BP; 936 A; 1285 C; 1303 G; 803 T; 0 other; tcgttccagg catccgcccc ggtgaacgca cgaccgaata catcgattac gtcttgacgc 60 gcatcaccgt catcggcgcg atctacctgg tcttcgtctg catcctgccc gagatactca 120 tctcgcagac aggcgtgccg ttctacattg gtggtacgtc gcttttgatt gttgtcagcg 180 tgaccctcga tacggtagca cagatccagg gtcacctcat tgcccagcaa tatgagggac 240 tgatcaagaa gtcgaagctg cgcggaggaa agaggggacg atgaggctaa tttttttggg 300 accgccgggc gctggcaagg gtactcaggc caagcttctg acggagagat acggcattcc 360 gcagctttcc acgggggata tgcttcggac ggcggtagct caggcgaccg aggtcggcaa 420 gcgcgcgaaa gccgtgatgg atgccggcca gctcgtctcc gacgaaatcg tcaacgagat 480 cgtctccgac cgcatcgatt ctgcggattg cgcaaggggc ttcattctcg acggctatcc 540 gcgcacggtt ccgcaggccg tagcgctcga ccggatgctt gaggaaaaag gcctgaaact 600 cgatgcggtg atcgagctga aggtcgatga ggcagccctt gtgcggcgca tggagaatcg 660 cgtaaccgaa accgtcgcgg ccggcggcac cgtacgctcc gacgacaatc cggaagcatt 720 ccggcgtcgt ctgcaggaat atcgggaaaa gaccgctccg ctttcggaac actacgcccg 780 aaccggtcgg ttgaagaccg tggacggcat ggcggatgtg catacggtta ccgccgagat 840 cgagaagatt ctggcatagg cgctgccttt gccaaaatgg gagcgcccgg gagttgactt 900 ttccggccga ttcctccaaa gactgcgtca actcgcgaca agagaagcga tcggcgcggt 960 cttcaacgaa atgaagtccg ggtacggtcg tttttgacgt gtctcgaacc tcaatcaaag 1020 tgcggctctt aaggtcgcgt aacgaagcac ctattgcctg taggcaatgg aacgcaagga 1080 gaatagacgt ggcacgtatc gctggcgtca acatcccgac cgcaaagcgc gtcgtcatcg 1140 cgctgacgta tattcacggg atcggcacga aattcgcaca ggaaatcatc gagaaggtcg 1200 gtattccggc cgaacgtcgc gttcaccagt tgacggacgc tgaggtcctt cagatccgtg 1260 aaacgatcga ccgcgactat caggtcgagg gtgacctgcg tcgcgagacc tcgatgaaca 1320 tcaagcgtct gatggatctc ggctgctatc gcggtcttcg ccatcgtcgc ggtctgccgg 1380 tgcgcggtca gcgcacgcac accaatgccc gcacccgcaa gggtccggca aaggcgatcg 1440 ccggcaagaa gaagtaattt cccgaaaagg gaaaacggga ggctggcgca cgcgccggcc 1500 tccttttgca gtttgggaag ggcaagtgtc cgaccaacgc gaggaccgtt accggttcct 1560 cggaatgctc gcgaggccgg tgcgctgtcg cgaatcgtaa gatgcagggc aggggacgac 1620 aaatcctttt cccggtggag ccgctggaat tacggcggtg cagagatcta agaaagggat 1680 cctatggcca aggaagccac ccgcgttcgc cgtcgcgagc gcaagaacat tacgtcgggc 1740 gttgcacacg tcaactcgtc gttcaacaac acgatgatca ccattaccga cgcgcagggc 1800 aatgctattg cctggtcgtc cgccggtgcg aagggtttca agggttcgcg caagtcgacc 1860 ccgttcgccg cgcagatcgc cgctgaagat tgcgccaaga aggcccagga acacggcatg 1920 aagtcgctgg aagtggaagt ttgcggtccg ggttccggcc gtgaatccgc tcttcgcgcg 1980 ctccaggctg caggtttcat gatcacgtcg atccgtgacg tgaccccgat cccgcacaat 2040 ggctgccgtc cgcgcaagaa gcgccgcgtc tgatcatctg tattcaacat tccggtgagg 2100 actttccggt gtcctcccgg tcttcggggc tcggttgtca cgattggatg gtggcaacga 2160 acggaaggca gaaaacatga tccagaaaaa ttggcaggaa ttgatcaagc cgaacaaggt 2220 ggagttcgcc tcctccggcc gcaccaaggc aacgttggtc gcggagccgc ttgagcgcgg 2280 ctttggcctg acgctcggca acgcgcttcg ccgcgtccta ttgtcgtcgc tgcgcggtgc 2340 tgccgtaacc gcggttcaga tcgacggcgt attgcatgag ttctcttcta tcccgggcgt 2400 ccgggaagac gtgaccgaca tcgtgctcaa catcaaggaa atcgccatca agatggatgg 2460 cgacgacgca aagcgcatgg tcgtgcgcaa gcagggtccg ggcgtcgtga ccgccggtga 2520 cattcagacg gttggcgaca tcgagatcct caacccgaac cacgtgatct gcaccctcga 2580 cgagggcgcg gaaatccgca tggagttcac cgtcaacaac ggcaagggct acgtaccggc 2640 tgaccgcaac cgctcggaag atgcgccgat cggcctcatt ccggtcgaca gcctgtactc 2700 tccggtcaag aaggtctcct acaaggtgga aaacacccgt gaaggccagg ttctcgacta 2760 tgacaagctg acgatgtcca tcgaaaccga tggctccgtc accggcgaag atgcgatcgc 2820 tttcgcggcc cgcatccttc aggaccagct gtcggtcttc gtcaacttcg acgagccgca 2880 gaaggaaacc gaggaagagg cagtcaccga actcgccttc aaccccgcgc ttctcaagaa 2940 ggtcgacgaa ctggagcttt ccgtccgttc ggccaactgc ctgaagaacg acaacatcgt 3000 ctatatcggc gacctcattc agaagaccga agcagaaatg ctccgtacgc cgaattttgg 3060 tcgcaagtcg ctcaacgaga tcaaggaagt tctcgcttcc atgggcctgc acctcggcat 3120 ggaagtgccg tcctggccgc cggagaacat cgaagatctc gccaagcgtt acgaagacca 3180 gtactaacct attagactgc gggcggatgc ctgcaagtaa aggagaatag ccatgcgcca 3240 cggtaaagcc ggccgcaagc tgaatagaac cgccagccac cgcaaggcga tgtttgccaa 3300 catggcagct tcgctgatcg agcacgagca gatcgtcacg accctgccga aggccaagga 3360 aatccgcccg atcgtggaaa agctcgtcac gctcggcaag cgcggcgatc tgcatgcccg 3420 ccgccaggcg atctcgcaga tccgcgacgt tgccgtcgtc tcgaagctgt tcgacgcgat 3480 tgcctcgcgc tacgccaccc gcaatggcgg ctacctgcgc atcatgaagg caggattccg 3540 ccagggcgac aatgccccgc tcgccgtcat cgaattcgtc gaccgcgacg tcgacgccaa 3600 gggttcgaag gaccgcgccc gcgtttctgc cgaagctgaa gcagccgaag cggcctgatt 3660 tcgtcagagc tgaccaaaga atgaaagcgg ctgggtgata atttcacccg gccgcttttt 3720 ctcgttctat tgaaagtgga agtaggtctt catcccttgt gcttgtcgca ggcgtgtgag 3780 cggcacgaaa gagtctttgc agcccaagga cttggtctgg ctggattcct gtgacaggca 3840 caggaatgag ggaggcaagc acgcgcgtta cggcaacctt cgctcgaagg atatgcgcgc 3900 catctcctaa atatccgcac ggcctaagta ttccccgggg gaccgcaccc tctaccctca 3960 ttccctgtgc tcgtcacagg gatccagcag cgccgcgtct gcggcgcggg agagcctttc 4020 agcccaagga cgtgcctggg ctggatacct gtgacgagca caggaatgag ggttgggaga 4080 ggtgttgcga gaccttggcc aatgcggcgc ttccccactg gcgccttcat cccgctctgg 4140 cttgcgaccg catcggtgcg gtgccctgtc gccgccaccg cagaaaccgc tttctgacgg 4200 cgcgccaggc gacgaggacc gccacaagga agagatacag catttgctcg gggccgacga 4260 ccttgaccga catggcgaaa tgcagcgctc cggccgcggc gatcacgtag acgagcctgt 4320 gaagctt 4327 // |
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