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EBI Dbfetch

ID   AF305580; SV 1; linear; genomic DNA; STD; PRO; 5139 BP.
XX
AC   AF305580;
XX
DT   13-OCT-2000 (Rel. 65, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Methanosarcina acetivorans strain C2A proABC locus, complete sequence.
XX
KW   .
XX
OS   Methanosarcina acetivorans
OC   Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
OC   Methanosarcinaceae; Methanosarcina.
XX
RN   [1]
RP   1-5139
RX   PUBMED; 11844777.
RA   Zhang J.K., White A.K., Kuettner H.C., Boccazzi P., Metcalf W.W.;
RT   "Directed mutagenesis and plasmid-based complementation in the methanogenic
RT   archaeon Methanosarcina acetivorans C2A demonstrated by genetic analysis of
RT   proline biosynthesis";
RL   J. Bacteriol. 184(5):1449-1454(2002).
XX
RN   [2]
RP   1-5139
RA   Zhang J.K., White A.K., Kuettner H.C., Boccazzi P., Metcalf W.W.;
RT   ;
RL   Submitted (13-SEP-2000) to the EMBL/GenBank/DDBJ databases.
RL   Microbiology, University of Illinois, 601 S. Goodwin, Urbana, IL 61801, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..5139
FT                   /organism="Methanosarcina acetivorans"
FT                   /strain="C2A"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:2214"
FT   CDS             909..2252
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="proA"
FT                   /product="ProA"
FT                   /function="involved in proline biosynthesis"
FT                   /note="glutamate semialdehyde dehydrogenase"
FT                   /db_xref="GOA:Q9HHA1"
FT                   /db_xref="HSSP:1O20"
FT                   /db_xref="InterPro:IPR012134"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9HHA1"
FT                   /protein_id="AAG22031.1"
FT                   /translation="MAEDIETKVVKAKKASIELSSVSEEVKNRALEAMAESLDRERKAI
FT                   LEANSKDLEYASELKKVGKLTQALVDRLKVTDSKIDGMIAGIMDVIKLKDPVGETLSTL
FT                   ELDNDLILYQISCPIGLIGVIFESRPDVVPQVMSLCLKSGNATIFKGGSEARESNRTIF
FT                   EILVKAIESTEGMPKGAFQLMETREEIMSLLSLDAYVDLLIPRGSNEFVKFIQDNTKIP
FT                   VLGHTSGICHIYVDEFADPDTAWKVCFDAKVQYPAVCNAIETLLVNRKIAEAFLPKMAE
FT                   MYIKAGVELRCDKDSYILLAEKGLSPLSKATEEDWSLEYNDLILSIKLVDTIKEAIAHI
FT                   NTFGSHHTDGIITENASRRKEFIGLVDSSSVMVNASTRFADGYRYGKGAEVGISTNKIH
FT                   SRGPVGMEGLLIYKYILMGKGQVVADYAGENAKPYTHRKLDLKFADVN"
FT   CDS             2391..3548
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="proB"
FT                   /product="ProB"
FT                   /function="involved in proline biosynthesis"
FT                   /note="glutamate kinase"
FT                   /db_xref="GOA:Q9HHA0"
FT                   /db_xref="InterPro:IPR019797"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9HHA0"
FT                   /protein_id="AAG22032.1"
FT                   /translation="MTDREQFFRDVNKIVIKIGTSSITRKGCDHTKENCNIDPAFMESI
FT                   AAQVYELRKHGKEVILVSSGAIGVGLNELGIAPKPREIPIRQAAAAVGQSILMQDWSRA
FT                   FSKYGMKVAQILLTYEFYSDRVTYLNLRNSISTLLEYEVVPIINENDCTCTNEIEAIFG
FT                   DNDKLSAMVASKIDADLLIILSDIDGLFDRNPKTHSDAKLLTLIKKITPEIESYGGDPT
FT                   NFKGVGGMRTKIKAAKICSMAGCYVVIANSEIEDVVTKILSGEEIGTLFLAERHIQKNR
FT                   ARWIILARASGTVRVDAGAKAAVLGKNSLLPAGIVDIEGTFDRGDVVKLECEGKVFAKG
FT                   ITNYTSKELIKIKGAQTNQIDNILGYNNYDNVIKKENIGILEGIN"
FT   CDS             3822..4634
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="proC"
FT                   /product="ProC"
FT                   /function="involved in proline biosynthesis"
FT                   /note="1-pyrroline-5-carboxylate reductase"
FT                   /db_xref="GOA:Q9HH99"
FT                   /db_xref="InterPro:IPR000304"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9HH99"
FT                   /protein_id="AAG22033.1"
FT                   /translation="MENQKIGFIGAGKMGSALMQGTIKAGIVTPENIGASDVYEPFLKD
FT                   LQAKLGIRVSTDNAVIVRESDILILAVKPQTLSSVLSNLKNEITSEKLVISIAAGVPLS
FT                   TYEDALLEGTRVVRVMPNIAATVSEAASGIAPGKNATPEDLKAALEIFSAVGTAVQVPE
FT                   SLMDAVTGLSGSGPAFIFPVIEAMADGAVLEGMDRKSALTLAAQTVLGAAKMALETGMH
FT                   PGELKDMVTSPAGTTIQGIHSLEEAGIRAAFMNAVIRASERSKELGKK"
XX
SQ   Sequence 5139 BP; 1564 A; 1095 C; 1090 G; 1390 T; 0 other;
     gatcatgtaa tgctattttt actttatccg agtcgtctgc ccggactaac gcaaatgatt        60
     tcatttttta cacaccacca atctacagaa gttatcccca tttcgatatg gatttacccc       120
     tataataaac tttgtgtatg aaacggctta gtggacgacc ataaattccc agccgaatgc       180
     agcaccctca ttagatcgag actgttaaaa attgccattt ccgtggcctt aatattttgt       240
     ccgcctttcg ccttattgca aaatatgttc aaaaattaca ggggtatttc acaagctctt       300
     ttttcaagat ttagtatgcg ctcccatgaa atagagtcgc atatgctata cttatatgca       360
     tcgtatatat attcgttttg aaataatatt ttaccaacag gggaacttta cttaaaatcc       420
     accttagttg agtttttaag agaagttttt tattggccaa gcaatataat attttattat       480
     tagatttcgt aaacttcatt ttttgattcc cggattaagt atgaatggag ccctttctcc       540
     aggttttttt tgaaataagg ggatatcaag actttaaatg aatatatata ttcacttaaa       600
     atatcatttt acattaaata aaaatagtat aatataaact tactcatttg attctgccat       660
     attgggcaaa aataacttcg ttaaatggga tcttttattt agaaccttgc catatcatat       720
     accgagacag tatacaaaaa tatttatcat agaactctct gtgttctgtt ttcatctccg       780
     tgcatgaaaa aacccaagta ttctatggac tgagttcttc ctcttataaa tctcaatcaa       840
     ttacatctta taatctcaat tatattttat aatctcgatt agggtcatta cataaagacg       900
     gtgaatatat ggctgaagat attgaaacta aagttgttaa ggcaaaaaaa gcttcaattg       960
     agctttccag tgtaagcgaa gaggtaaaaa atagggcgct tgaggctatg gcagaatccc      1020
     tggacagaga aagaaaagct attcttgaag caaactcaaa agaccttgaa tatgcatccg      1080
     aactgaaaaa agtcgggaag cttacccagg cccttgtgga caggctcaag gtcacggact      1140
     caaagattga cgggatgatc gcaggaatca tggatgtaat aaagctcaaa gatcctgttg      1200
     gggagactct ttccacactc gagcttgaca acgatctgat cctctatcag attagctgcc      1260
     ccataggcct gataggagtg atttttgaat cccggcctga cgttgtgcct caggtaatgt      1320
     ccctctgtct gaagagcgga aacgcaacca ttttcaaagg cggaagcgaa gccagagagt      1380
     cgaaccgcac aattttcgaa attcttgtca aagccataga atccaccgag ggaatgccga      1440
     aaggagcctt ccagctaatg gaaacaagag aagagatcat gagccttctg agccttgatg      1500
     cgtatgtcga cctcctgatc cccagaggct ctaatgagtt tgtcaagttc attcaggaca      1560
     atacaaaaat cccggtactc gggcacacaa gcgggatttg ccatatctat gtagatgagt      1620
     ttgcagaccc ggatactgcc tggaaagttt gtttcgatgc caaggtccag taccctgcag      1680
     tatgcaacgc cattgaaacc ctgctggtaa accgcaaaat tgcggaagct ttcctgccga      1740
     aaatggcaga gatgtacata aaagcaggag tggaactgcg ctgtgacaaa gatagctata      1800
     tcctgctcgc agaaaaaggg ctctctcccc tctcaaaggc tacagaagag gactggagcc      1860
     tcgaatataa cgaccttatc ctttcgataa aactcgtaga tactataaaa gaagcaattg      1920
     cccacataaa caccttcggc tcccaccaca cagacgggat aataacggaa aatgcttctc      1980
     ggagaaaaga attcataggg ctagttgact cctcaagcgt aatggtaaat gcctctacac      2040
     ggtttgcgga cggctaccgc tacggaaaag gtgccgaagt agggatcagt acgaataaga      2100
     tccattcccg tggacctgtt ggcatggaag ggctgctgat ttacaagtat atccttatgg      2160
     gtaaagggca agtcgttgcc gactatgcag gagaaaacgc aaaaccctat actcacagga      2220
     agcttgacct taagtttgcg gatgtgaatt aacacatccc tgaatattta tgatatgttt      2280
     atatacttga attgaaatac cagcgcaggt taagtgcaaa aactggaaat cctggctgcg      2340
     atcgagatta cttgcagcca tcttccaaat aaccttcaga ggcacttcca ttgacagata      2400
     gagaacaatt cttccgtgat gttaataaaa tcgttattaa gattggaact tcttcgataa      2460
     ccagaaaggg ttgcgaccac actaaagaaa actgcaatat tgaccctgcc tttatggaaa      2520
     gcatcgcagc tcaggtctac gaacttcgaa aacatggaaa agaagtaatt cttgtaagtt      2580
     cgggagcaat aggcgtgggg cttaacgagc tgggcatagc ccccaaaccc cgcgagatcc      2640
     ccattaggca ggcagccgca gctgttgggc agagcatact gatgcaggac tggagcaggg      2700
     ctttttccaa atacgggatg aaggtagccc agattcttct tacctatgaa ttctattccg      2760
     atcgcgtaac ctaccttaac ctgaggaaca gcatttcaac ccttctggag tatgaagtcg      2820
     tcccgataat aaacgaaaac gactgtacat gtacaaacga gattgaagca atcttcgggg      2880
     acaatgacaa gctctctgca atggttgcaa gcaaaattga tgctgacctc ctgatcatcc      2940
     tttcagacat tgacgggctc tttgacagga acccaaagac gcacagtgat gcaaaactgc      3000
     tgacccttat aaaaaagatc acacctgaaa tcgagagcta cgggggagac cccacaaact      3060
     tcaagggtgt gggggggatg cgaaccaaga taaaagctgc aaaaatctgc agcatggcag      3120
     gctgctatgt cgtaatcgca aacagtgaaa tagaggatgt ggttactaag atcctttccg      3180
     gagaagagat cggaacgctc ttccttgcag agaggcatat tcagaaaaac cgcgctcgct      3240
     ggataattct tgccagagcc tcagggactg tccgcgtgga cgccggagca aaagctgcgg      3300
     tgctgggaaa aaacagcctc cttccggcag gtattgtgga tattgaggga acttttgaca      3360
     ggggagacgt cgtgaagctc gaatgtgaag gcaaggtctt tgcaaaggga atcacgaact      3420
     acacttccaa agaactgatt aaaatcaaag gagcccagac aaatcaaatc gacaatattc      3480
     tgggctataa taattatgat aatgtaatta agaaagaaaa tatcggtata ctggaaggga      3540
     taaactaaat tcatcgggct caggaaaatt ttccgaatct cgtctgatcc cggaaaacag      3600
     taatctatcc agagagttca accgggctat tgagtttccg aaactttaac aggtaatatt      3660
     gagtttccaa ctctaacagg atatgaattt tcgaaacctt aacaggtaat aaatgcagtt      3720
     gtgcgttgaa attagcattc cgcagatgag tttcaaaaat agtccttttc aaatttacag      3780
     ttaatataca atcattttct ggaaataagg agatttcgta catggaaaat caaaaaatag      3840
     gatttatagg ggcaggaaaa atgggctctg ctctcatgca gggcaccata aaagcaggaa      3900
     tcgtaacacc tgaaaatata ggtgcaagtg atgtatacga gccctttttg aaagacctgc      3960
     aggcaaaact gggaatccgg gtgtcaaccg acaacgctgt tatcgtccga gaatcggaca      4020
     ttcttatcct tgcagtaaag ccccagaccc tgagttcggt gctttcaaat ctgaagaatg      4080
     aaatcacttc ggaaaaactc gtgatctcaa ttgctgcagg agtgcccctt tccacatacg      4140
     aggacgctct ccttgaaggt accagggttg tgcgtgtaat gccaaacata gcagccacag      4200
     tttctgaagc tgcttcaggg attgctcccg gaaagaatgc aactcctgag gacctgaaag      4260
     ctgccctcga gatcttttct gcagtcggca cagcagtcca ggtgccggag tccctgatgg      4320
     atgccgttac agggctttcg ggcagtggac ctgcgtttat tttcccggtt attgaagcaa      4380
     tggctgacgg ggctgtcctt gaagggatgg ataggaaaag cgccctcact cttgcagccc      4440
     agactgtgct cggagccgca aaaatggcgc ttgaaacagg catgcacccc ggagaactca      4500
     aagatatggt cacatctccc gccggaacta ccatccaggg gattcactcc cttgaagaag      4560
     ccggaatccg ggctgccttt atgaatgcag taataagagc aagtgaacgc tcaaaggaac      4620
     tcggaaagaa ataaatccga ttccttctct ttacttttct atctctttac ttttctatca      4680
     ttcatccttc ttttttaatt cggcatcttc atcagaaaat ttcgaaacgt aaattcattc      4740
     agataaaatt tggttttaag gcttcgtttt tgccttttga ctttaccctg cctttgactt      4800
     tactctgcct ttgaccctgc tttcggcagg taacttgttt ttctcgtaat atttttactg      4860
     atagcgtttt tgctagaaaa cacattattc ctgatactag acattattgc aaaaacggct      4920
     cattgtttat atatgtcgtg agatttgggc catatgttaa ccagtttcga acccgacata      4980
     tatgcacata atgtttgaaa aacgccatca ttataaatac ttaaaatcta atgtcgacct      5040
     gccgaatata ggtttgactt tactctgcct ttgactttac tctgcctttg actttactct      5100
     gcctttgact ttatcctgtt catctagttt aaggatcca                             5139
//


  
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