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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF303057; SV 1; linear; mRNA; STD; VRL; 1761 BP.
XX
AC   AF303057;
XX
DT   07-DEC-2000 (Rel. 66, Created)
DT   07-DEC-2000 (Rel. 66, Last updated, Version 1)
XX
DE   Influenza A virus (A/duck/Malaysia/F119-3/97(H5N3)) hemagglutinin mRNA,
DE   complete cds.
XX
KW   .
XX
OS   Influenza A virus (A/duck/Malaysia/F119-3/97(H5N3))
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
XX
RN   [1]
RP   1-1761
RA   Banks J.;
RT   "Phylogenetic analysis of H5 subtype viruses";
RL   Unpublished.
XX
RN   [2]
RP   1-1761
RA   Banks J.;
RT   ;
RL   Submitted (06-SEP-2000) to the EMBL/GenBank/DDBJ databases.
RL   Virology, Veterinary Laboratories Agency-Weybridge, Woodham Lane,
RL   Addlestone, Surrey KT15 3NB, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1761
FT                   /organism="Influenza A virus
FT                   (A/duck/Malaysia/F119-3/97(H5N3))"
FT                   /strain="A/duck/Malaysia/F119-3/97(H5N3)"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:144182"
FT   CDS             24..1718
FT                   /codon_start=1
FT                   /product="hemagglutinin"
FT                   /db_xref="GOA:Q9DLP3"
FT                   /db_xref="InterPro:IPR000149"
FT                   /db_xref="InterPro:IPR001364"
FT                   /db_xref="InterPro:IPR008980"
FT                   /db_xref="InterPro:IPR013827"
FT                   /db_xref="InterPro:IPR013829"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DLP3"
FT                   /protein_id="AAG38534.1"
FT                   /translation="MEKIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHA
FT                   QDILEKTHNGKLCSLNGVKPLILRDCSVAGWLLGNPMCDEFLNVPEWSYIVEKDNPVNG
FT                   LCYPGDFNDYEELKHLLSSTNHFEKIRIIPRSSWSNHDASSGVSSACPYNGRSSFFRNV
FT                   VWLIKKNNAYPTIKRSYNNTNQEDLLILWGIHHPNDAAEQTKLYQNPTTYVSVGTSTLN
FT                   QRSVPEIATRPKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGGSAIM
FT                   KSGLEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSGRLVLATGLRNVPQRE
FT                   TRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGITNKVNSIID
FT                   KMNTQFEAVGKEFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVK
FT                   NLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYPQYSEEARLNREEISG
FT                   VKLESMGIYQILSIYSTVASSLALAIMIAGLSFWMCSNGSLQCRICI"
XX
SQ   Sequence 1761 BP; 597 A; 326 C; 402 G; 436 T; 0 other;
     tagcaggggt ataatctgtc aagatggaga aaatagtgct tcttcttgca atagtcagtc        60
     ttgttaaaag tgaccagatt tgcattggtt accatgcaaa taactcgaca gagcaggttg       120
     acacaataat ggaaaagaat gttactgtta cacatgctca agacatattg gaaaagacac       180
     acaacgggaa gctctgcagt ctaaatggag tgaaacctct cattttgagg gattgtagtg       240
     tagctggatg gctcctcgga aaccctatgt gtgacgaatt cctcaatgtg ccggaatggt       300
     cttacatagt ggagaaggac aatccagtca atggcctctg ctacccagga gatttcaacg       360
     actatgaaga actgaaacac ctattgagca gcacaaacca ttttgagaaa atccgaatca       420
     tccccagaag ctcttggtcc aatcatgatg cctcatcagg agtgagctct gcatgtccat       480
     ataatgggag gtcctccttt ttcagaaatg tggtatggct tatcaaaaag aacaatgcat       540
     acccaacaat aaagaggagt tacaataaca ccaaccaaga agatcttttg atactgtggg       600
     ggattcacca tcctaatgat gcggcagagc agacaaagct ctatcaaaac ccaactacct       660
     acgtttccgt tggaacatca acactgaacc agagatcggt cccagaaata gctaccaggc       720
     ccaaagtgaa cgggcaaagt ggaagaatgg agttcttctg gacaatttta aagccgaatg       780
     atgccatcaa ttttgagagt aatggaaatt tcattgctcc agaatatgca tacaaaattg       840
     ttaaaaaagg aggctcagca atcatgaaaa gtggattgga atatggtaac tgcaacacca       900
     agtgtcaaac tccaatgggt gcgataaact ctagtatgcc attccataac atacaccctc       960
     tcaccattgg agaatgcccc aaatatgtga aatcaggtag attagtcctt gcaactggac      1020
     tcagaaatgt ccctcaaaga gaaacaagag gactatttgg ggctatagca ggctttatag      1080
     aaggaggatg gcaaggaatg gtagacggtt ggtatgggta ccaccatagc aacgagcagg      1140
     ggagtggata cgctgcagac aaagaatcca ctcaaaaggc aatagatgga atcactaata      1200
     aggtcaactc aatcattgac aaaatgaaca ctcagtttga ggccgttgga aaggaattta      1260
     ataacttgga aaggaggata gagaatttga ataagaaaat ggaagacgga tttctagatg      1320
     tctggactta taatgctgaa cttttggttc taatggaaaa tgagagaacc ctagactttc      1380
     atgactcaaa tgtcaagaac ctttatgaca aggttcgact acagcttagg gataatgcaa      1440
     aggagctggg taatggttgt ttcgagttct accataaatg tgataatgaa tgtatggaaa      1500
     gtgtaaaaaa cgggacgtat gactacccgc agtattcaga agaggcaaga ctaaacagag      1560
     aggaaataag tggggtgaaa ttggaatcaa tgggaattta ccaaatactg tcaatttatt      1620
     caacagtggc gagttcccta gcactggcaa tcatgatagc tggtctatct ttctggatgt      1680
     gctccaatgg atcattgcag tgcagaattt gcatttaaat ctgtgagttc agattgtagt      1740
     taaaaacacc cttgtttcta c                                                1761
//
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