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EBI DbfetchID AF302465; SV 1; linear; genomic DNA; STD; PRO; 7569 BP. XX AC AF302465; XX DT 17-MAR-2001 (Rel. 67, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Pasteurella multocida P934 region 2 capsule biosynthesis gene cluster, DE partial sequence. XX KW . XX OS Pasteurella multocida OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Pasteurella. XX RN [1] RP 1-7569 RX DOI; 10.1128/JCM.39.3.924-929.2001 RX PUBMED; 11230405. RA Townsend K.M., Boyce J.D., Chung J.Y., Frost A.J., Adler B.; RT "Genetic organization of Pasteurella multocida cap Loci and development of RT a multiplex capsular PCR typing system"; RL J. Clin. Microbiol. 39(3):924-929(2001). XX RN [2] RP 1-7569 RA Townsend K.M., Boyce J.D., Chung J.Y., Frost A.J., Adler B.; RT ; RL Submitted (03-SEP-2000) to the EMBL/GenBank/DDBJ databases. RL Veterinary Pathology and Anatomy, The University of Queensland, School of RL Veterinary Science, Brisbane, QLD 4073, Australia XX FH Key Location/Qualifiers FH FT source 1..7569 FT /organism="Pasteurella multocida" FT /strain="P934" FT /mol_type="genomic DNA" FT /note="Carter reference strain type: D" FT /db_xref="taxon:747" FT CDS complement(<1..351) FT /codon_start=1 FT /transl_table=11 FT /gene="phyA" FT /product="PhyA" FT /note="similar to KpsS, LipA" FT /db_xref="GOA:Q9AHN4" FT /db_xref="InterPro:IPR007833" FT /db_xref="UniProtKB/TrEMBL:Q9AHN4" FT /protein_id="AAK17907.1" FT /translation="MSILYDYIGLTMYQEFLIFSKGMLKIPYLSGFFTQRLKMFSPFVT FT WKKERTCILEWGYKASSKKARYFAQQHDLPYATIEDGFLRSIGLGVDGYPPFSLVYDDI FT GIYYDINQPSRLE" FT CDS 1061..2872 FT /codon_start=1 FT /transl_table=11 FT /gene="dcbE" FT /product="DcbE" FT /note="similar to HyaE, KfiB" FT /db_xref="UniProtKB/TrEMBL:Q9AHN3" FT /protein_id="AAK17906.1" FT /translation="MKKVIIIGHKQSNYQNVEKAFQYYGMNPPHPSKREKMSPIEIGDV FT LNKVLPDLNKAPENLSLLPNKKIKGSSIKNKSRKKSRNSTVKTTSLWDNLYLDLVLANI FT DQEFWGWSDPNSLQLLDYWANIDQDIHFVFVYDKPENLFQHNFIEESIELDSEKIKEKL FT EEWEKYNEKLLMFFNKYKERSVLINSRQIRKSIQNSIPKIYKELSASEVTLEKILHEDR FT LDIPSENLNENLNPLSDLIISNVLKKHYSTVELYEKLQRESSLPYLDTNKVNDISLAIN FT AWQEMIKRNKEYQILTAEHKNTETFPLEEKNKLVEKTKEIVREKEKNIKDKKDLEIQIE FT ALQLKLEKYFIESNALKEDNKKLSIEIDDLNIKKEENIKSLKKEIETLKAEIEKNHIEN FT KNLKETNKSSLIEIEKLNREKEDDNKQKEKTITLLKKEDSIKSNELDRKNEEIKNYKII FT IEDNIKEKKSLENQVEALQFELEKYFIENKKIKEKPPLWGASKVIRSTLEYQLGRTMIE FT KSRSIIGFIMLPISLILGYLSFKISEIRKDKNIILHEYQDYYEAMKLKNHLSYKLGEVF FT IINFKNPIKWILLPYRLYKTVFNFKKK" FT CDS 2892..4397 FT /codon_start=1 FT /transl_table=11 FT /gene="dcbF" FT /product="glycosyltransferase DcbF" FT /db_xref="GOA:Q9AHN2" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q9AHN2" FT /protein_id="AAK17905.1" FT /translation="MSLFKRATELFKSGNYKDALTLYENIAKIYGSESLVKYNIDICKK FT NITQSKSNKIEEDNISGENEFSVSIKDLYNEISNSELGITKERLGAPPLVSIIMTSHNT FT EKFIEASINSLLLQTYNNLEVIVVDDYSTDKTFQIASRIANSTSKVKTFRLNSNLGTYF FT AKNTGILKSKGDIIFFQDSDDVCHHERIERCVNALLSNKDNIAVRCAYSRINLETQNII FT KVNDNKYKLGLITLGVYRKVFNEIGFFNCTTKASDDEFYHRIIKYYGKNRINNLFLPLY FT YNTMREDSLFSDMVEWVDENNIKQKTSDARQNYLHEFQKIHNERKFNELKEIFSFPRIH FT DALPISKEMSKLSNPKIPVYINICSIPSRIKQLQYTIGVLKNQCDHFHIYLDGYPEVPD FT FIKKLGNKATVINCQNKNESIRDNGKFILLEKLIKENKDGYYITCDDDIRYPADYINTM FT IKKINKYNDKAAIGLHGVIFPSRVNKYFSSDRIVYNFQKTFRK" FT CDS 4785..5957 FT /codon_start=1 FT /transl_table=11 FT /gene="dcbC" FT /product="UDP-glucose dehydrogenase DcbC" FT /db_xref="GOA:Q9AHN1" FT /db_xref="HSSP:1DLJ" FT /db_xref="InterPro:IPR017476" FT /db_xref="UniProtKB/TrEMBL:Q9AHN1" FT /protein_id="AAK17904.1" FT /translation="MKKITIAGAGYVGLSNAVLLAQHHNVTLLDIDQNKVDLINNKISP FT ISDEEIENFLQNKSLSIVATTNKEAALKDADFVIIATPTDYNTETGYFNTSTVESVIEQ FT TLLINSLTTIIIKSTVPVGFTEKMREKFHTKNIIFSPEFLREGKALHDNLFPSRIIVGS FT TSYQAKVFADMLIQCARKKDVTVLFTHNTEAEAVKLFANTYLAMRVAFFNELDTYASLH FT HLNTKDIINGISTDPRIGTHYNNPSFGYGGYCLPKDTKQLLANYAYVPQNLIEAIVKSN FT ETRKRFIAHDVLNKKPKTVGIYRLIMKSGSDNFRASAILDIMPYLKENGVEIVIYEPTL FT NQQAFEDYPVINQLSEFINRSDVILANRSEPDLNQCSHKIYTRDIFNVDA" FT CDS 5950..7383 FT /codon_start=1 FT /transl_table=11 FT /gene="dcbB" FT /product="glycosyltransferase DcbB" FT /db_xref="GOA:Q9AHN0" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q9AHN0" FT /protein_id="AAK17903.1" FT /translation="MLNLFKIIKKYVHIQSLLHKKEYALLYAKYINQLSINQQAYVICQ FT LKLYDLFLINPKWSHSVFFQLGLIARGHDHDNDEMVRRLITCTDFSKNKQLILSQLLAY FT SPQIATTLCPQTYRYRALYLSLLANLKDFVRLKEELNKLPSCVLKNTPHYCLLQNFVEK FT ENSKKLENINQFLYFYKLGEITTIKTEDPPNTNNIVSHSIVNDTNTYLNAPLITILVTT FT FNSQKSIKNTLNSLFNQSYPNIEIIVIDDHSQDNTMSILQAYTKQYKNIKIISLKENVG FT TYVAKNIGLKYASGEFITCQDSDDWAHPQKLALQVAPLLQHKELIVTFSKWVRLDPIGN FT PYARTIYPLMRLNPSSALFRKKEVCEKTALWDWVRIGADSEFNARLKLIFGHKGYYTVN FT KPLTFGAHRENSLMTAQSTGYVNGVSLPREAYWKAWNIWHISQLQRGHAPLLSSSPKRE FT FFQYDQHPIMDVISYAIIN" FT CDS 7402..>7569 FT /codon_start=1 FT /transl_table=11 FT /gene="hexD" FT /product="HexD" FT /note="similar to BexD" FT /db_xref="UniProtKB/TrEMBL:Q9AHM9" FT /protein_id="AAK17902.1" FT /translation="MKPIKTLSIYFITTLILAGCHSMPTSGPAQNHIIGLKKPQNESLP FT SVDVIEMNDKV" XX SQ Sequence 7569 BP; 2990 A; 1208 C; 1072 G; 2298 T; 1 other; ttctaaacga gaaggctgat tgatatcata ataaatacca atatcatcgt acactaatga 60 gaaaggtgga tacccatcca cacccagtcc aatagaacgt aaaaaaccat cttctatcgt 120 cgcataaggt aaatcatgtt gttgtgcaaa atatctcgcc ttctttgatg atgctttata 180 tccccattct aaaatacatg ttctctcctt tttccatgtg acaaacggag agaacatttt 240 taagcgttgg gtaaaaaaac cgcttaaata aggaattttt aacatccctt tagaaaaaat 300 aagaaactct tgatacatag ttaatccaat ataatcatat aaaattgaca tgtcatatat 360 taaacatgac tagttatgcc attaaatatt aaacaacttc aatttaataa accaaaattg 420 aacaaataac aatccgcccg taaaacgggc ggtttttagg ctaccctata agggcctagt 480 acttcacatg cccctcaagg ggcatgtgaa ttctgacaac cgttcaataa ctctgttgcc 540 taccccttaa aggggtccat atattctttc ttcgataaat tatcctgaat catatcttcc 600 ttttcctgat ttcggatata ttcctctaca attttcgtat ttaaaccgac tgtacttaca 660 taatagcctt tcgcccaaaa atttcggttt ccatactata tttcaaattc gcatgctttt 720 caaatatcat tagcgatgat ttacctttta aataccccat aaaacttgaa actgccagtt 780 tcggaggtat ccttaacagc atatggatat gctctttcat tgcatatgcc tctattatct 840 ctacattctt gtagtgacat aattgtctta gtatccctcc tatatcaact cgcaattttc 900 cataaaacga atattggtta acaattaaac actttgtttg tttcataatc aaatagaact 960 tttatatata aaatcgaaat ggaaaatata gattactatc ttaaataaat gctagaatcc 1020 aatccagtga ttttttaaga tgtaaattan ggataaataa atgaaaaaag tcattatcat 1080 tggacataaa cagtccaact atcaaaatgt tgaaaaggct tttcaatact atggaatgaa 1140 tccaccacat ccatctaaaa gagaaaaaat gtcacctatc gaaattggtg atgtacttaa 1200 taaagtatta ccagacctta ataaagctcc tgagaaccta tctctacttc caaataaaaa 1260 aatcaaaggc tcttcaataa aaaacaaatc taggaaaaaa tctaggaata gcacagtaaa 1320 aacaacaagc ttatgggata atttatattt agatctagta ttggcaaata ttgatcaaga 1380 gttttgggga tggtccgatc ccaattcact ccaattacta gattattggg ccaatataga 1440 ccaagatatt cattttgttt ttgtttatga taaaccagaa aaccttttcc aacacaattt 1500 catagaagag tcgatagaat tagatagcga aaaaataaaa gaaaaattag aagagtggga 1560 aaaatataat gaaaaactac ttatgttctt taataaatat aaagaacgta gtgttctgat 1620 taactcaaga caaattagaa aaagtattca aaattccatc cctaaaattt ataaagaact 1680 ttctgcatcc gaagttactc tagaaaaaat actccatgaa gatagattag atataccatc 1740 cgaaaatctt aatgaaaatt taaacccttt atctgattta attattagta atgttctaaa 1800 aaaacattac tctactgttg aactatatga aaaattacaa agagaatcta gcctacctta 1860 tttagataca aataaggtaa atgatatatc attagcaatt aatgcttggc aagaaatgat 1920 taaaagaaat aaagaatacc aaattctcac tgcggaacat aagaatacag aaacattccc 1980 ccttgaagaa aaaaacaaat tagttgagaa aacaaaagaa atcgtccgag aaaaagaaaa 2040 aaatataaaa gataaaaaag atctagagat acaaatagaa gcattgcaat taaaactaga 2100 aaaatatttt atagaaagta atgctctaaa agaagataac aaaaaattat caatagaaat 2160 agatgactta aatataaaaa aagaagaaaa tataaaatct ctaaaaaaag aaattgagac 2220 attaaaagca gagatagaga aaaatcatat agaaaacaaa aacctaaaag aaactaacaa 2280 aagttcatta atagaaatag agaaattaaa tagagaaaaa gaagatgaca ataaacaaaa 2340 agaaaaaaca ataacattat taaaaaagga agattcaatt aaatctaatg aattagatag 2400 aaaaaatgaa gaaataaaaa actataaaat tattatagaa gataatatca aagagaaaaa 2460 atctctagaa aaccaagtag aagcattaca atttgagctc gaaaaatact tcatagaaaa 2520 taaaaagata aaagaaaaac caccattatg gggagcttca aaagtaataa gatcaacgct 2580 tgaatatcaa ttaggaagaa caatgataga aaaaagtagg tctataattg gatttattat 2640 gctacctata tctttaattt taggttattt atcatttaaa atatctgaaa ttagaaagga 2700 taaaaacatc atactccatg aatatcaaga ttattatgag gcaatgaaat taaaaaatca 2760 tctttcctac aaattaggtg aggtatttat aattaatttc aaaaacccaa taaagtggat 2820 attacttcca tatcgtctat ataaaacagt ttttaacttc aagaagaaat aataattaaa 2880 aggaaattaa aatgagctta tttaaacgtg ctactgagct atttaagtca ggaaactata 2940 aagatgcact aactctatat gaaaatatag ctaaaattta tggttcagaa agccttgtta 3000 aatataatat tgatatatgt aaaaaaaata taacacaatc aaaaagtaat aaaatagaag 3060 aagataatat ttctggagaa aacgaatttt cagtatcaat aaaagatcta tataacgaaa 3120 taagcaatag tgaattaggg attacaaaag aaagactagg agccccccct ctagtcagta 3180 ttataatgac ttctcataat acagaaaaat tcattgaagc ctcaattaat tcactattat 3240 tgcaaacata caataactta gaagttatcg ttgtagatga ttatagcaca gataaaacat 3300 ttcagatcgc atccagaata gcaaactcta caagtaaagt aaaaacattc cgattaaact 3360 caaatctagg gacatacttt gcgaaaaata caggaatttt aaagtctaaa ggagatatta 3420 ttttctttca ggatagcgat gatgtatgtc accatgaaag aatcgaaaga tgtgttaatg 3480 cattattatc gaataaagat aatatagctg ttagatgtgc atattctaga ataaatctag 3540 aaacacaaaa tataataaaa gttaatgata ataaatacaa attaggatta ataactttag 3600 gcgtttatag aaaagtattt aatgaaattg gtttttttaa ctgcacaacc aaagcatcgg 3660 atgatgaatt ttatcataga ataattaaat actatggtaa aaataggata aataacttat 3720 ttctaccact gtattataac acaatgcgtg aagattcatt attttctgat atggttgagt 3780 gggtagatga aaataatata aagcaaaaaa cctctgatgc tagacaaaat tatctccatg 3840 aattccaaaa aatacacaat gaaaggaaat ttaatgaatt aaaagagatt tttagctttc 3900 ctagaattca tgacgcctta cctatatcaa aagaaatgag taagctcagc aaccctaaaa 3960 ttcctgttta tataaatata tgctcaatac cttcaagaat aaaacaactt caatacacta 4020 ttggagtact aaaaaaccaa tgcgatcatt ttcatattta tcttgatgga tatccagaag 4080 tacctgattt tataaaaaaa ctagggaata aagcgaccgt tattaattgt caaaacaaaa 4140 atgagtctat tagagataat ggaaagttta ttctattaga aaaacttata aaggaaaata 4200 aagatggata ttatataact tgtgatgatg atatccggta tcctgctgac tacataaaca 4260 ctatgataaa aaaaattaat aaatacaatg ataaagcagc aattggatta catggtgtta 4320 tattcccaag tagagtcaac aagtattttt catcagacag aattgtctat aattttcaaa 4380 aaacctttag aaaatgatac tgctgtaaat atattaggaa ctggaactgt tgcctttaga 4440 gtatctattt ttaataaatt ttctctatct gattttgagc atcctggcat ggtagatatc 4500 tatttttcta tactatgtaa gaaaaacaat atactccaag tttgtatatc acgaccatcg 4560 aattggctaa cagaagataa caaaaacact gagaccttat ttcatgaatt ccaaaataga 4620 gatgaaatac aaagtaaact cattatttca aacaaccctt ggggatactc aagtatatat 4680 ccattattaa ataataatgc taattattct gaacttattc cgtgtttatc tttttataac 4740 gagtaaatta ataaatttat acaataaaaa ctttaggatg aaaaatgaaa aagattacaa 4800 ttgctggagc tggctatgtt ggtttatcca atgcagtatt attagctcaa caccacaatg 4860 taacgttact agacatagac caaaataagg ttgatttgat taataacaag atatctccta 4920 tttctgatga agaaatcgag aatttcttac aaaataaatc gttgtcaata gtagctacca 4980 caaataaaga agcagcacta aaagatgccg actttgtcat tatagcaaca ccgactgatt 5040 ataatacaga aactggatat tttaatacat ctactgttga gtcggtaatt gaacaaacac 5100 tattaataaa ctcacttaca acaattatta taaaatcaac ggtccccgtt ggttttaccg 5160 aaaaaatgcg tgagaaattt cataccaaga acattatttt ttctcctgag tttttaagag 5220 aaggaaaagc acttcatgac aatttgtttc caagtagaat tattgttggc agtacgtctt 5280 atcaagcaaa agtatttgcc gatatgttga tacagtgtgc cagaaaaaaa gatgtaactg 5340 ttttatttac acacaatact gaggctgaag ctgttaaatt atttgcaaat acgtatctcg 5400 caatgcgagt tgcctttttt aatgaattag atacttatgc gagtcttcac catttaaata 5460 caaaagacat tatcaatggt atttctactg atcctcgcat tggcacacac tataataacc 5520 caagtttcgg ctatggcggt tattgtttac ccaaagacac taaacagtta ctggctaact 5580 atgcttacgt acctcaaaat ctcattgaag ccattgtcaa atctaatgaa accagaaaac 5640 gtttcattgc ccatgatgta ttaaataaga aacctaaaac tgttggtatt tatcgtttaa 5700 tcatgaagtc aggttctgat aacttcagag cttctgctat tctcgatatt atgccgtatc 5760 tcaaagaaaa cggtgttgag attgtgattt atgagccaac cttaaatcaa caggcatttg 5820 aggactaccc cgttattaat caactctctg aatttattaa tcgctctgat gtcattctcg 5880 ctaatcgttc tgagcccgat ttaaatcaat gttcccataa aatctataca agagatattt 5940 ttaacgttga tgcttaacct gtttaaaatc ataaaaaagt atgtgcatat tcaatcttta 6000 ttacacaaaa aagaatatgc cttactttat gctaaataca taaaccagct ttctattaac 6060 cagcaggctt atgttatttg tcaactcaaa ctctatgatc tctttctgat taatcctaaa 6120 tggagccact ctgttttttt ccagttagga ttaattgctc gtggacacga tcatgataac 6180 gatgaaatgg tacgtcgttt gatcacttgc actgatttta gcaaaaataa gcagttaatc 6240 ctttctcaat tacttgctta ttcaccccaa attgcaacaa cattatgtcc acagacatat 6300 cgttatcgtg cgctatatct ctcattacta gcgaatttaa aagactttgt tcgtttaaaa 6360 gaagaactca ataagttgcc gtcatgtgtg ttaaagaata cacctcatta ctgtttgtta 6420 cagaattttg tcgaaaaaga aaacagcaag aaattagaga acattaatca atttctttac 6480 ttttataaac ttggagaaat aactacgata aagacagaag atccacctaa tactaataat 6540 atagtcagtc attcgatagt taatgacaca aacacctact taaatgcccc tttaattacc 6600 atattagtga cgacatttaa cagtcaaaaa agtataaaaa acacattaaa ttcattgttc 6660 aatcaaagct atccaaatat tgaaattatc gttattgatg atcatagcca agataatacg 6720 atgagtattc tccaggctta tactaagcaa tataaaaata tcaaaatcat tagcttaaaa 6780 gaaaatgtcg ggacttatgt cgcaaaaaat attgggctta aatacgcctc tggcgaattc 6840 atcacttgtc aagattccga tgattgggca cacccacaaa aattggcact tcaggtggct 6900 cctttattac aacataaaga gttaattgta actttttcta agtgggtaag gctcgatcca 6960 atagggaatc cttatgcccg tactatttat ccattaatgc gtttaaaccc ttcttccgca 7020 ttattccgta aaaaagaagt gtgtgaaaaa actgcattat gggattgggt aagaatcggt 7080 gcagatagcg aatttaatgc acgcttaaaa ttaatttttg gacacaaagg ctattacacc 7140 gtgaataaac ctttgacatt cggtgcacat cgagaaaatt cattaatgac agctcaaagt 7200 actggctatg tcaatggcgt ctccctacct cgtgaagcat attggaaagc atggaatatc 7260 tggcatattt cacaattaca gcgaggacac gcccctcttt tatcttcctc tcctaaacga 7320 gaattttttc aatatgacca acatccgatc atggatgtta tttcttatgc aatcattaat 7380 taaatcttaa gagagattat tatgaaacca ataaaaacat tatctattta ttttatcaca 7440 acgctcatcc tcgctggctg tcatagcatg ccaacttcgg gacccgctca aaatcatatt 7500 attgggttaa aaaaaccaca aaatgagagc ttgccaagtg ttgatgtgat tgaaatgaat 7560 gataaagta 7569 // |
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