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EBI DbfetchID AF290893; SV 1; linear; genomic DNA; STD; PLN; 3098 BP. XX AC AF290893; XX DT 19-SEP-2000 (Rel. 65, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Lycopersicon esculentum endo-beta-mannanase (LeMan3) gene, complete cds. XX KW . XX OS Solanum lycopersicum OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; OC Lycopersicon. XX RN [1] RP 1-3098 RA Banik M., Bewley D.; RT "Endo-beta-mannanase gene sequence"; RL Unpublished. XX RN [2] RP 1-3098 RA Banik M., Bewley D.; RT ; RL Submitted (27-JUL-2000) to the EMBL/GenBank/DDBJ databases. RL Botany, University of Guelph, Guelph, ON N1G 2W1, Canada XX FH Key Location/Qualifiers FH FT source 1..3098 FT /organism="Solanum lycopersicum" FT /mol_type="genomic DNA" FT /db_xref="taxon:4081" FT CAAT_signal 874..880 FT /gene="LeMan3" FT TATA_signal 919..926 FT /gene="LeMan3" FT TATA_signal 958..964 FT /gene="LeMan3" FT mRNA join(997..1502,1596..1790,1869..1991,2063..2266, FT 2348..>2819) FT /gene="LeMan3" FT /product="endo-beta-mannanase" FT CDS join(1182..1502,1596..1790,1869..1991,2063..2266, FT 2348..2710) FT /codon_start=1 FT /gene="LeMan3" FT /product="endo-beta-mannanase" FT /EC_number="3.2.1.78" FT /db_xref="GOA:Q9FUQ6" FT /db_xref="InterPro:IPR001547" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/Swiss-Prot:Q9FUQ6" FT /protein_id="AAG14352.1" FT /translation="MSYTHRRSCISGLFLLLLALSCEANSGFIGVKDSHFELNGSPFLF FT NGFNSYWLMHVAADPAERYKVTEVLKDASTAGLSVCRTWAFSDGGDRALQISPGVYDER FT VFQGLDFVIAEAKKYGVRLILSFVNQWNDFGGKAEYVWWARNAGVQISNDDEFYTHPIL FT KKYLKNHIEVVTRLNSITKVAYKDDATIMAWELMNEPRDQADYSGKTVNVGWVQEMASF FT VKSLDNKHLLEVGMEGFYGDSIPERKLVNPGYQVGTDFISNHLINEIDFATIHAYTDQW FT LSGQSDEAQLAWMEKWIRSHWEDARNILKKPLVLAEFGKSSRSGEGSRDIFMSSVYRNV FT YNLAKEGGTMGGSLVWQLMAHGMENYDDGYSIVLGLNPSTTQIISNQAHIMTALAHSLN FT HE" FT sig_peptide 1182..1256 FT /gene="LeMan3" FT polyA_signal 2814..2819 FT /gene="LeMan3" XX SQ Sequence 3098 BP; 1072 A; 426 C; 499 G; 1101 T; 0 other; ggatcccggg aattctcgat catcaaaaat aaacaaagtg tgaccaaata taaataacgt 60 tatactagtt tttaatataa agaaatattc atatgttata attttaaaac caaccttaaa 120 gataagaaat acaattttgt tggataatgt tacggaagat ccacgaagaa acatatattt 180 atgcttgatg gacttagtta agaataaaat tcgcgtttac tatcagttat acgttgagat 240 aggctgaagt aaaaacttca aaggacaaat agattgacat cctcaaactt gattataata 300 taattatttg attataatat aattattgta gcgggtaaaa ttaatacgtg tcttacttaa 360 cacgctaaac taactctata gtatcgtgtg atccatatga ggcgaaacta aaatttcaat 420 tttatgaatt gtgaatttga taataataat tttaagtgac aataattaac ttctatattc 480 aacatttata cgtatttgat aaatttacga acataaatat actatttaac aaaatttatt 540 acccccgggc cccgaggccc cacataaatt tatgttccgt tactatatat gttgatataa 600 ttttttttct ttcttaccga atactaataa aataagtaaa aaaaatcaac ttttttccac 660 gaatcaaact aattgatgat ttaatatatg agttttggta tttcattatt actactagtt 720 tagtgtacat gttttgcatt tgtagttttg catttgtatt tgaaattaaa atttatggaa 780 gagttcattg cattaaatta aatataatac tatgagtaca cgtttccatt atattatttc 840 atcatcaaat ccacactcaa caaaccttaa aaaccaatca attaatgttt tccatatttt 900 tttctttttc atttacccta taaaattctt tcaatagacc tatctttcta tcttaactaa 960 ataactacct taattctcta tcaacaaaaa atcaacatcc catcatacct tttaagaaca 1020 aaaacatttt tttcaaaata accaattata tccactagga ttttattttt tttagttttt 1080 gcaagttttg ctatttttag taaatttcct tatcttcaac acactataaa aggtgacatc 1140 taacatatca cacatataac atctattatt cattatacaa aatgtcttat acacatagaa 1200 gaagttgtat ttctgggctc tttctcttgt tgttagctct ttcttgtgaa gcgaattcgg 1260 ggtttatagg agttaaagat tctcattttg aactcaatgg atctcctttt ctattcaatg 1320 gtttcaactc atattggttg atgcatgttg ctgctgaccc tgctgaaagg tacaaagtca 1380 ctgaggttct taaagatgct tctaccgctg gtctttctgt ttgtcgtact tgggctttta 1440 gtgatggagg tgatagagca ttacaaatat cacctggtgt ttatgatgaa cgtgtttttc 1500 aggtaaagga catttgttgt tatagtatca atgatttttt ttttgcattg tcgcatttca 1560 atgcatgtga gtcccttact tgtttctaaa tttagggttt ggattttgtg atcgcggaag 1620 ctaagaaata tggtgttcgt ttaatattga gctttgtaaa tcaatggaat gattttggag 1680 gaaaagctga atatgtgtgg tgggcgcgaa atgcaggagt tcagattagt aatgacgatg 1740 aattctatac tcatcctata ctcaaaaaat acttgaagaa tcacattgag gtacatatgg 1800 ggtagttatt atttaataca tataaacaac ttttttttat aattaatatt atgaaattat 1860 tacagaaagt tgttacaagg ttgaatagta tcactaaagt tgcttacaaa gacgatgcaa 1920 caattatggc atgggaactc atgaatgagc ctcgcgatca agctgactat tcaggaaaaa 1980 ctgttaatgt aagtttgaaa ttcaagttta attttaaaaa tatcaaatct ataattgacg 2040 tttttgatga atattgttat agggttgggt tcaagaaatg gcgagttttg tgaagtcatt 2100 agataacaaa cacttgttgg aagttggaat ggagggattt tatggtgatt caattcctga 2160 aaggaaatta gttaatcctg gttatcaagt tggaacagat ttcattagta accatcttat 2220 caatgaaatt gattttgcta caatccatgc atacactgat caatggtatg tagaatttac 2280 atgatctttc gaatctgtac gtacattttc ataagtttaa atatttattt atatcgatgg 2340 ttataggtta tctggacaaa gtgatgaagc acaattggcg tggatggaaa agtggataag 2400 aagtcattgg gaagatgcaa gaaatatatt gaagaaacct ttagtgcttg ctgaatttgg 2460 aaagtctagt agatcaggtg aaggatcaag agatatattt atgagtagtg tgtacagaaa 2520 tgtgtataat ttggcaaaag aaggtggaac aatgggagga agtttagtat ggcaactaat 2580 ggcacatgga atggagaatt atgatgatgg ttattctatt gttttgggac taaatccttc 2640 aactacacaa attatctcaa accaagctca tatcatgact gctttggctc attctctcaa 2700 tcatgagtga agacatcata ataatcaatt tataatctat catttttagt attattaatt 2760 tgagatgata ttaccaaaca tgttcaagtt gattaaacac aagaatgtaa ttgaataaat 2820 tgttttagta aaaaggaaag ttatgttata tgtccacatg tttttatttt gagtttgaaa 2880 gcaaagatca agaacactaa ttttaatcca gtggaaattc acaaagtaac acatgcaatt 2940 gtattgttat caagcatata tacaaacaac aaaaagaaaa ctaaaaaaca gaaaagtcca 3000 tcttctatac cttttcattt tgttgggata aatgccttca aaaagttggg caaatcattc 3060 tggcttacaa tatttaaaca ctaggctcca cacaatag 3098 // |
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