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EBI Dbfetch

ID   AF279264; SV 1; linear; genomic DNA; STD; PRO; 2214 BP.
XX
AC   AF279264;
XX
DT   05-NOV-2000 (Rel. 65, Created)
DT   05-NOV-2002 (Rel. 73, Last updated, Version 3)
XX
DE   Cellvibrio japonicus pectate lyase (Pel10A) gene, complete cds.
XX
KW   .
XX
OS   Cellvibrio japonicus
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Cellvibrio.
XX
RN   [1]
RP   1-2214
RX   DOI; 10.1042/0264-6021:3550155
RX   PUBMED; 11256960.
RA   Brown I.E., Mallen M.H., Charnock S.J., Davies G.J., Black G.W.;
RT   "Pectate lyase 10A from Pseudomonas cellulosa is a modular enzyme
RT   containing a family 2a carbohydrate-binding module";
RL   Biochem. J. 355(Pt 1):155-165(2001).
XX
RN   [2]
RP   1-2214
RA   Black G.W., Brown I.E., Mallen M.H., Charnock S.J.;
RT   ;
RL   Submitted (16-JUN-2000) to the EMBL/GenBank/DDBJ databases.
RL   School of Sciences, University of Sunderland, Wharncliffe Street,
RL   Sunderland SR1 3SD, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2214
FT                   /organism="Cellvibrio japonicus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:155077"
FT   CDS             101..2050
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="Pel10A"
FT                   /product="pectate lyase"
FT                   /db_xref="GOA:Q9F7L3"
FT                   /db_xref="InterPro:IPR005084"
FT                   /db_xref="PDB:1GXM"
FT                   /db_xref="UniProtKB/TrEMBL:Q9F7L3"
FT                   /protein_id="AAG29353.1"
FT                   /translation="MRTLHFLPVSRFFMTSLLAVTAISQVAPAWAACSYKVTNNWGSGF
FT                   TAEINVTNDTGQAVSNWSVSWQESGATVTNAWNATLSGSNPYTAASLGWNGTLAPGASA
FT                   SFGFQANGSAGAPGVNGTLCGTATSSVSSVSSTPVSSSSSVRSSSSSSSVQSSQALSTL
FT                   TLQEVQAGFCRVDGIANESTNGGFTGTGYANTDNALGAAIVWAVAASTSSRYKLTVRFA
FT                   NGGSASRDGSLLINGGSNGNYTLSLPATGAWTTWQTVTVEVDLVQGNNLVQLTSRTADG
FT                   LANIDYLRVEGASTTAGSCSGNTGSSVSSVRSSSSVASSSSSSQATGRMLTLDGNPAAN
FT                   WLNNARTKWSASRADVVLSYQQNNGGWPKNLDYNSVGNGGGGNESGTIDNGATITEMVF
FT                   LAEVYKSGGNTKYRDAVRKAANFLVNSQYSTGALPQFYPLKGGYSDHATFNDNGMAYAL
FT                   TVLDFAANKRAPFDTDVFSDSDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQHGALD
FT                   YQPKKARAYELESLSGSESVGVLAFLMTQPQTAEIERAVRAGVAWFNSPRTYLEGYTYD
FT                   SSLAATNPIVPRAGSKMWYRFYDLNTNRGFFSDRDGSKFYDITQMSLERRTGYSWGGNY
FT                   GTSIINFAQKVGYL"
XX
SQ   Sequence 2214 BP; 504 A; 602 C; 607 G; 501 T; 0 other;
     ccggcagcac cggataactg attgggggtg tgtaatgcga gtcggcctgg ttcgcctgcg        60
     catctgacat taacaataag aatgtactga aggaaaacca atgcgaacac ttcatttttt       120
     acctgtatcc cgttttttca tgacatcgct cctggcagta accgccatca gccaggtggc       180
     gcctgcctgg gccgcctgca gttacaaggt cacgaataat tggggctcgg ggtttaccgc       240
     tgaaattaac gtcacaaacg ataccggcca ggccgtgagc aactggtcgg tgtcctggca       300
     ggaaagtggt gcaaccgtga ccaatgcctg gaatgcgacc ctgagtggct ccaatcctta       360
     cactgctgct tccctggggt ggaatggcac cctggcgccg ggcgcctccg ccagctttgg       420
     cttccaggcc aatggcagcg caggtgctcc cggggtgaac ggcaccctgt gcggaaccgc       480
     cacctcatcg gtgagcagtg tgtccagtac accggtaagc agttcgtcca gtgtcaggag       540
     ttcttcctcc agcagttcgg tacagagctc ccaggcgctc tcaaccttga ccctccagga       600
     agtgcaggcc ggcttttgcc gcgtggatgg tattgccaat gaatccacca acggcggatt       660
     taccggtacc ggttacgcca ataccgataa cgcgctgggt gctgccattg tgtgggcagt       720
     tgcggccagt accagcagcc gctacaagct cacagtgcgc tttgccaatg gtggttcagc       780
     cagtcgcgat ggttcattgc tgattaacgg tggcagcaac ggtaattaca ccctgagcct       840
     gcccgctacc ggcgcctgga cgacctggca aacggtgacg gttgaggtag acctggtaca       900
     gggcaacaac ctggtgcaat tgacctcgcg cactgccgat ggcctggcca atattgacta       960
     cctgcgagta gagggggcgt caaccaccgc cggttcctgc agcggcaata ccggtagcag      1020
     tgtctcttca gtcaggtcca gctccagtgt ggccagcagc tcgtcctcca gccaggcgac      1080
     aggccggatg ctaaccctgg atggcaaccc ggcagccaat tggttaaaca atgcgcgcac      1140
     aaaatggtct gccagccgtg cggatgtggt gttgtcttac cagcaaaata acggcggctg      1200
     gccgaagaac ctggattaca acagtgtcgg caatggcggt ggcggcaatg agagcggcac      1260
     tatcgacaat ggggcaacca ttactgaaat ggtattcctc gccgaggttt acaaaagcgg      1320
     aggcaatacc aaataccgcg atgccgtgcg caaggcggct aactttttgg tgaactcaca      1380
     atacagcacc ggtgccttgc cgcagtttta tccgttgaaa ggtggctatt ctgatcatgc      1440
     cacctttaac gataacggta tggcctatgc cttaacggta ttggattttg cggccaacaa      1500
     gcgcgcgcct tttgataccg atgtattctc tgacagtgat cgcacgcgtt tcaaaacagc      1560
     ggtgaccaaa ggcactgact atatcctcaa ggcccagtgg aagcagaatg gtgtattaac      1620
     cgtttggtgc gcacagcacg gtgccctgga ttaccaaccg aaaaaagctc gcgcctatga      1680
     acttgagtca ttgagtggca gtgaatctgt aggcgtcctg gcattcctga tgacgcaacc      1740
     gcaaacggcg gagatcgaac gcgcggtaag agcgggggtt gcctggttca atagtccgag      1800
     aacttacctt gaggggtata cctacgattc atccctcgcg gctaccaatc ccatcgtacc      1860
     cagggcaggc agtaaaatgt ggtatcgttt ttacgatttg aacactaacc gcggtttctt      1920
     cagtgatcgt gacggcagca agttctatga cattacccaa atgtccctgg agcgtcgcac      1980
     cggctatagc tggggtggta actatggaac ctcgattatc aacttcgccc agaaagtggg      2040
     ttacctgtaa cctggtgtac ttccctccgc actaatcaaa aggcctgcaa ttgcaggcct      2100
     tttgattatc ttcgtacaca tcctatggtg ttcataaatc attcccgatt taccagatac      2160
     cttttttctg ctgcaaatgg gtaattagca gattggccag cagttgatca tcgt            2214
//


  
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