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EBI Dbfetch

ID   AF274869; SV 1; linear; genomic DNA; STD; PRO; 2380 BP.
XX
AC   AF274869;
XX
DT   02-DEC-2000 (Rel. 66, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Pasteurella multocida isolate 86-1913 sialidase NanH (nanH) gene, complete
DE   cds.
XX
KW   .
XX
OS   Pasteurella multocida
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
OC   Pasteurellaceae; Pasteurella.
XX
RN   [1]
RP   1-2380
RX   DOI; 10.1128/JB.182.24.6874-6883.2000
RX   PUBMED; 11092845.
RA   Mizan S., Henk A.D., Stallings A., Maier M.M., Lee M.D.;
RT   "Cloning and characterization of sialidases with 2-6' and 2-3' sialyl
RT   lactose specificity from Pasteurella multocida";
RL   J. Bacteriol. 182(24):6874-6883(2000).
XX
RN   [2]
RP   1-2380
RA   Lee M.D., Mizan S., Maier M.M., Henk A.D.;
RT   ;
RL   Submitted (02-JUN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Medical Microbiology, University of Georgia, Athens, GA 30602, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2380
FT                   /organism="Pasteurella multocida"
FT                   /isolate="86-1913"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:747"
FT   CDS             90..2333
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="nanH"
FT                   /product="sialidase NanH"
FT                   /function="2-3' sialyl lactose specificity"
FT                   /EC_number="3.2.1.18"
FT                   /db_xref="GOA:Q9EZV6"
FT                   /db_xref="HSSP:3SIL"
FT                   /db_xref="InterPro:IPR008377"
FT                   /db_xref="InterPro:IPR011040"
FT                   /db_xref="UniProtKB/TrEMBL:Q9EZV6"
FT                   /protein_id="AAG35310.1"
FT                   /translation="MKKPVFLLSLLALSTSMAVHGNSFWKADLHENLTNVTKRVGVDGF
FT                   TVNKEGQPWPGIGPNGEAGGTVTLPYSRIPAMTITDDNKMVVMFDLRWKTASDQNRIDP
FT                   GAAISEDGGHSWKRITAWNFNDSKISLRRAMDPTLLFNSFDGSLYVMHGTWAAGTQNWY
FT                   RDRLSYFNQNIWAATIYKSTDGGLSWQKNTEFSNTVNRDVFMKVQKGVGNPTIGFLGGV
FT                   GTGIVMKDGTLVFPIQTAHREGIATTIMYSKDNGRTWDMPTINNALAPNPSSLENMVFE
FT                   IDNKLVMTGREDNGKKTRWAYYTEDLGQTWHVYEPVNGFSATTAAPSQGSSIYVTLPIG
FT                   KRFLLLSKPNGNGNDRYAKGNLALWMLNAKNPNHKHQVPIIKPGSGNSAGAGYSPLAYK
FT                   KGNLFIAFENNGDITVKNLSAHMQAIEKKATEWGLTDEIATEVEKINSLEHLNKGQKET
FT                   LSAKMRRANDNAVAESNVLNREMHELKDEATSLEQKSVAMRKALPSKMKQFKRDLGEVR
FT                   DLTQLTNETYLNYLGIQGLMAMLNGSFLALNTPLDFSKYIKQGEKLNSYDTDILYSTYN
FT                   KVFVEYDSVIKNSQHRPTIALGLNTRLTDQTQAGVFYEYENKKQKVDAFGVRAQYTKGD
FT                   NVLAPFLRYRTVKHDDVIDRNHNVDLYINYAKNVNIDPHLTLSPFVGAYTSLSSRTLLD
FT                   EDVAVNKRLVMAGDVGLDIRYRLADISVSIRPNIAFIKDGFTFSQAIYRDNPF"
XX
SQ   Sequence 2380 BP; 790 A; 389 C; 531 G; 670 T; 0 other;
     tgagggggtt gtttttttat tcgatgttta tagacttgaa attaatcaat tttttacccc        60
     tatacgaaaa taatcctaag gagaataaaa tgaaaaagcc ggtgttcttg ttgtctttac       120
     tcgcactctc tacttcaatg gcagtacatg gtaacagctt ttggaaagct gatttgcatg       180
     aaaatttaac taatgtgacg aaaagggtag gcgttgatgg ttttactgta aataaagaag       240
     gtcaaccttg gccagggata ggaccgaatg gcgaagcggg tggaaccgtt acactgcctt       300
     atagccgtat tccagctatg acgattacag atgataataa aatggttgtg atgtttgatt       360
     tacggtggaa gacagcaagt gaccaaaatc gtatcgatcc tggcgccgcg atttcagaag       420
     atggggggca tagttggaaa agaattaccg cttggaattt taatgattca aaaatttctt       480
     tgcgtcgtgc gatggacccg acattattgt tcaacagctt tgatggcagt ttatatgtga       540
     tgcacggcac ttgggcggca ggaacacaaa actggtatcg agacagacta agctatttta       600
     atcagaatat ttgggcggca acaatttata aatccactga tggtggatta agttggcaaa       660
     aaaatactga attcagcaat actgtgaatc gcgatgtttt tatgaaagta caaaaagggg       720
     taggtaatcc cacaattgga tttttaggcg gtgtgggaac gggaattgtg atgaaagacg       780
     gtacattagt tttcccaatc caaacagcac atcgtgaagg tattgccacg acaattatgt       840
     attctaaaga taatggaaga acctgggata tgccgacaat taataatgcg ttagcaccga       900
     atccaagctc tttagaaaat atggtattcg aaattgacaa taagttagtg atgacagggc       960
     gagaagataa tggaaaaaaa acaaggtggg cgtattacac tgaagattta gggcaaactt      1020
     ggcatgttta tgaaccagtt aatggcttta gtgcgactac agcggctcct tcacaaggtt      1080
     catcaattta tgtaacctta ccgattggaa aacgattttt attattgtca aaaccaaatg      1140
     gcaatggcaa tgatcgctat gcaaaaggga atttggcact ttggatgcta aatgcaaaaa      1200
     accctaacca taaacatcag gtaccaatca ttaaaccggg ttcgggtaac agtgctggtg      1260
     cagggtattc tcctttagcc tataaaaaag gtaatttatt tattgccttt gaaaacaatg      1320
     gtgatattac cgttaaaaat cttagcgcac atatgcaagc aattgaaaaa aaagccacag      1380
     aatggggttt gaccgatgaa attgcaacag aagtggagaa aatcaattcg ttagaacatt      1440
     taaataaagg acaaaaagag acactaagcg ccaaaatgcg ccgagcgaat gataatgcgg      1500
     tggctgaatc gaacgtctta aatcgagaaa tgcatgaatt aaaagacgaa gcaacatcac      1560
     ttgagcaaaa atcggtggcg atgagaaaag cactgccctc taaaatgaaa cagtttaagc      1620
     gagatcttgg agaagtacgt gatttaacac aactgaccaa tgaaacctac cttaattatc      1680
     ttggtataca aggcttaatg gctatgttaa atgggtcttt tcttgcgctc aatacgccat      1740
     tagatttttc taagtacata aaacaaggtg aaaagctcaa tagctatgac acggatattc      1800
     tttatagtac ctataataag gtgtttgttg agtacgattc agtgattaaa aacagccaac      1860
     accgtccgac aattgcgctt ggattaaata caaggttaac tgaccaaaca caagcgggag      1920
     tgttttatga gtatgaaaat aaaaaacaaa aagtcgatgc ctttggggta agagcgcaat      1980
     acacaaaagg ggataatgtg ttagcgccct ttttacgtta tcgaactgtt aaacatgatg      2040
     acgtgattga tcggaaccat aatgttgatc tgtacatcaa ttatgcgaaa aacgtgaata      2100
     ttgatccgca tttgacatta agtccatttg ttggtgctta tacatcgctc tcttcacgta      2160
     cgttgttgga tgaagatgtc gcagtgaata aacgtcttgt gatggcaggt gatgtggggc      2220
     ttgacattcg ttatcgttta gcggatatca gtgtgagtat tcgaccgaat attgctttta      2280
     tcaaagatgg tttcactttt tcacaagcaa tttatcggga taacccattt taaataaaat      2340
     tccactaaac atggtttatg ctttaaatgt gggggttgag                            2380
//


  
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