 |
|
EBI DbfetchID AF274868; SV 1; linear; genomic DNA; STD; PRO; 3360 BP. XX AC AF274868; XX DT 02-DEC-2000 (Rel. 66, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Pasteurella multocida isolate 86-1913 sialidase NanB (nanB) gene, complete DE cds. XX KW . XX OS Pasteurella multocida OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Pasteurella. XX RN [1] RP 1-3360 RX DOI; 10.1128/JB.182.24.6874-6883.2000 RX PUBMED; 11092845. RA Mizan S., Henk A.D., Stallings A., Maier M.M., Lee M.D.; RT "Cloning and characterization of sialidases with 2-6' and 2-3' sialyl RT lactose specificity from Pasteurella multocida"; RL J. Bacteriol. 182(24):6874-6883(2000). XX RN [2] RP 1-3360 RA Lee M.D., Mizan S., Maier M.M., Henk A.D.; RT ; RL Submitted (02-JUN-2000) to the EMBL/GenBank/DDBJ databases. RL Medical Microbiology, University of Georgia, Athens, GA 30602, USA XX FH Key Location/Qualifiers FH FT source 1..3360 FT /organism="Pasteurella multocida" FT /isolate="86-1913" FT /mol_type="genomic DNA" FT /db_xref="taxon:747" FT RBS join(38..43,49..54) FT CDS 77..3289 FT /codon_start=1 FT /transl_table=11 FT /gene="nanB" FT /product="sialidase NanB" FT /function="2'3- and 2'6-sialyl lactose specificity" FT /EC_number="3.2.1.18" FT /note="neuraminidase" FT /db_xref="GOA:Q9EZV7" FT /db_xref="HSSP:2SLI" FT /db_xref="InterPro:IPR005546" FT /db_xref="InterPro:IPR006315" FT /db_xref="InterPro:IPR011040" FT /db_xref="UniProtKB/TrEMBL:Q9EZV7" FT /protein_id="AAG35309.1" FT /translation="MMKKFNPSVLALSISSLLLTSTLTFGQIQQQDKAHFGVKEHQESL FT LFHQSLVKQGSDNVPIWRIPSLLRTKDGVLIAAADKRWQHRGDWGDIDTAIRISHDDGK FT TWGNITTILDLPSQNGEKSPIRDDAPTFNPWAHRNNSSVATYRNSAFLIDAQMVQDKRN FT GRIFLAVDMFPESTGLSGPSDNGVTEFGSGYVNIDGKQYLRLNKKEGYTSKQWTLRENG FT IVFNEKNEKTGYRVVINGDPKKNFKDLGDVYDQDNNKLGNIYLKQTERNATVPFIAPNT FT SYFWLTHSDDNGKTWSSPIDLTSQVKKDWMRFFGTGPGVGIQTKKGNLLFPIYYINRHG FT KQSSALIISKDGGKTWDLGQSPNDTRTELYGKNSETLNSNSSGHELTESQLVELQNGDL FT KLFMRNTSGRVMMSTSKDGGYSWIETKQVPELNHGYSQLSVIKYSKKINGKEYIVFSGQ FT SVSGNSGDKLRRDGKLFLGEVQDNGDINWDTTNLVRNIKSSGLAKQGSEVYPNGYVYSS FT MAELGDGSIGLAYENTTDYTTIMYLPIEMQEFFWKAGKIFSDVRQKEPLVFTYDGTETL FT EKIGDGIAIKRGEGESQSGINVSEGLLVLDQQTKDGKNKAFTQLTLNNSGVAQVNSTQN FT IDRFVVNNGATGYLQFTVTDTHSPRLKINQDVTAHGQIVAVQVNLQKKLKPNDKGYYHA FT QGEELIAFKDNGQVKWRLVNDELKDGMYVYTLASVAKPSGLRTPSQPHSLYLTNKLITA FT DGKAVSTVAPLKAPLTVNARPQVNPVLASYLTANLALNKMSEQLQQSFMHETRLLQEKD FT RSIFVKYLNGKQKYGSNLSFYDYGYDFNASYSGVMLGGKVWQSERGNHALYTALNKTSY FT KVTPKAVDGETKAKYQSWGGSINWHSNLPHNLIVDLSTGYQKHKGDIEHAGHVKGYTFN FT IGADLGYRYQWMKNAFITPMVGLHYLYASLSDVNDQANKALLKYNNFNALKTNLGVDVN FT YRIGKFEVKGLLSYDMYQQKTRQLYVDDVAYKQGKLADTLHLNTQFVAHLTPRFAFSTE FT VGFQHARNKGQSSFAVGAHYQF" XX SQ Sequence 3360 BP; 1134 A; 538 C; 718 G; 970 T; 0 other; gttagcttag atcatgttgt ttttacaaca tattttgagg ttgtttgaag gttgagctta 60 ttttatagtt gaggtgatga tgaaaaaatt taatcctagt gtattggcgt tgtccatatc 120 aagtctgcta ctcacatcca cattgacctt tggtcaaatc cagcaacaag ataaagcaca 180 ctttggtgtg aaagaacatc aagaaagcct actctttcat cagagcttag taaaacaagg 240 tagtgataat gtgccaattt ggcgcattcc gtctttatta agaacaaaag acggtgtatt 300 aattgccgcc gcagataagc gttggcaaca ccgtggtgac tggggcgata ttgataccgc 360 aatccgaatt agtcatgatg atgggaaaac atggggaaat attacaacga ttttggattt 420 gccatcacaa aatggagaga aatcaccaat tagagatgat gcgccaacgt ttaatccttg 480 ggcacatcgt aataatagtt ctgtagcaac atatcgaaac tcagcatttt tgattgatgc 540 acaaatggta caagataagc gcaatggtcg aatttttctg gctgtagata tgttcccaga 600 aagtacaggt ttatcggggc catcagataa tggcgttact gagtttggta gtggatatgt 660 aaacattgat ggaaaacaat acttaagact taataaaaaa gagggatata cttctaagca 720 atggactctg cgcgaaaacg gaatagtttt taatgaaaaa aatgagaaaa cgggatatcg 780 agttgttata aatggcgacc ctaagaagaa tttcaaagat ctcggggacg tatatgatca 840 agataataat aaacttggaa atatttattt aaaacaaaca gaaaggaatg caacagttcc 900 tttcattgca cctaacacct cttatttttg gctaactcat tccgatgata atggaaaaac 960 atggtctagt cctattgatt taacatcgca agtgaaaaaa gattggatgc gtttttttgg 1020 cacaggacct ggggtgggaa ttcaaacaaa aaaaggaaat ttactctttc ctatttatta 1080 tattaatcgc catggtaaac agtcctctgc gctgattatt agcaaagacg gtggaaaaac 1140 atgggattta gggcaaagtc caaatgatac acgaaccgaa ttatatggta agaattcaga 1200 gacattgaat agtaactcta gtggtcacga attaactgaa tcacaattag tcgagttaca 1260 aaatggtgat ttaaagcttt tcatgcgtaa tacaagtggt cgagttatga tgtctacttc 1320 taaagatgga ggttatagtt ggattgaaac taagcaagta ccagagttaa atcacggcta 1380 ttcacaactt tctgtcatta aatattccaa aaaaattaat ggaaaagaat atattgtttt 1440 ttcagggcaa tcagtgtccg ggaatagtgg tgataaactt cgtcgagatg ggaaactttt 1500 cttaggtgaa gtgcaagata atggtgatat taattgggat actacaaatt tagtcagaaa 1560 cattaagagt tctggattag ctaagcaagg ttcagaagtt tatccaaacg gctatgttta 1620 cagctcaatg gcggaattag gtgatggcag tattggttta gcttatgaaa atacgacaga 1680 ctacaccaca atcatgtatc tccctattga aatgcaagaa tttttttgga aagccggaaa 1740 aatctttagt gatgtgcgtc agaaagaacc attagtgttt acttatgatg gaacggagac 1800 attggaaaaa attggcgatg ggattgcgat taaacgtggt gaaggggaaa gtcaaagtgg 1860 aattaatgtg agtgaaggct tgcttgtgtt ggatcagcaa acgaaagacg gtaaaaacaa 1920 agcctttact caacttaccc ttaataactc gggagtagct caagttaatt ccacacaaaa 1980 tattgatcgg ttcgttgtga acaacggtgc tacggggtat ttgcaattta cggtcacaga 2040 tactcactct ccacgactta agattaatca agacgtgact gcacatgggc agattgtggc 2100 tgtacaagtc aacctacaga aaaaactcaa accaaatgat aaaggttatt accatgccca 2160 aggagaagaa ctaatcgcat ttaaggataa tggacaagtc aaatggcgtt tagttaacga 2220 tgaactaaaa gatggcatgt atgtttatac tttggcttca gtggctaaac caagtggttt 2280 acgtacacca agtcagccac attcactcta tttaacaaat aagttaatta cagcagatgg 2340 taaagccgta tccacggtcg ctccattgaa agcaccatta accgtaaatg ctcgcccaca 2400 agtgaatccg gtattagctt cttatttaac cgccaatctt gcgcttaata aaatgagcga 2460 gcaacttcag caaagtttta tgcatgaaac gcgtttattg caagaaaaag atcgcagtat 2520 ttttgttaag tatcttaatg gtaaacaaaa atatggctca aacttaagct tttatgacta 2580 tgggtatgat tttaatgcga gttatagcgg tgtgatgttg ggaggcaaag tatggcagtc 2640 tgaacgtggt aaccatgccc tgtatacagc attgaataaa acgtcctata aagtgacgcc 2700 gaaagctgta gatggtgaga cgaaagcgaa ataccaaagt tggggaggaa gtataaattg 2760 gcatagtaac ttgcctcaca atctgatagt agatttatca accggctatc aaaaacataa 2820 gggcgacatt gaacatgcag gtcatgtgaa aggttatact tttaatattg gtgcggattt 2880 aggttatcgc tatcaatgga tgaaaaatgc gtttattaca ccaatggttg gtttgcatta 2940 tttatatgcc tcgctttcag atgtcaatga ccaagcgaat aaagcgttat tgaaatataa 3000 taatttcaat gcgttaaaaa cgaatttagg tgttgatgtg aactatcgaa tcgggaagtt 3060 tgaagtaaaa ggtctacttt cttacgatat gtatcaacaa aaaacgcgtc aattgtatgt 3120 tgatgatgta gcatataagc aaggtaaact ggctgataca cttcatttaa atacacaatt 3180 cgttgcccat ttaacgccac gttttgcatt ttcaacggaa gttggtttcc agcatgcgcg 3240 gaataaagga cagtcttcct ttgctgttgg ggcacattat cagttctaag gactgagtgc 3300 tcatttaact tgagtacctt tttaaataaa agtaatgaaa attgaacaga aatgcgattt 3360 // |
|