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EBI DbfetchID AF263927; SV 1; linear; genomic DNA; STD; PRO; 2626 BP. XX AC AF263927; XX DT 30-MAY-2000 (Rel. 63, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Carnobacterium sp. St2 glutamate racemase (glr) gene, complete cds; and DE ribonuclease PH (rph) gene, partial cds. XX KW . XX OS Carnobacterium sp. St2 OC Bacteria; Firmicutes; Lactobacillales; Carnobacteriaceae; Carnobacterium. XX RN [1] RP 1-2626 RA Galkin A., Kulakova L., Kurihara T., Yoshimura T., Esaki N.; RT "Proteins from Cold-Adapted Bacteria: Evolutionary and Structural RT Relationships with Mesophilic and Thermophilic Counterparts"; RL Unpublished. XX RN [2] RP 1-2626 RA Galkin A., Kulakova L., Kurihara T., Yoshimura T., Esaki N.; RT ; RL Submitted (05-MAY-2000) to the EMBL/GenBank/DDBJ databases. RL Institute for Chemical Research, Kyoto University, Uji, Kyoto-fu 611-0011, RL Japan XX FH Key Location/Qualifiers FH FT source 1..2626 FT /organism="Carnobacterium sp. St2" FT /strain="St2" FT /mol_type="genomic DNA" FT /db_xref="taxon:76118" FT CDS 700..1506 FT /codon_start=1 FT /transl_table=11 FT /gene="glr" FT /product="glutamate racemase" FT /db_xref="GOA:Q9L4V5" FT /db_xref="InterPro:IPR001920" FT /db_xref="InterPro:IPR004391" FT /db_xref="InterPro:IPR015942" FT /db_xref="InterPro:IPR018187" FT /db_xref="UniProtKB/Swiss-Prot:Q9L4V5" FT /protein_id="AAF72713.1" FT /translation="MKKQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPR FT PEDQVRKFTWEMTHFLLDKNIKMLVIACNTATAAALKDIKKKLAIPVIGVILPGSRAAI FT KATHTNRIGVIGTEGTVKSNQYKKMIHSKDTKALVTSLACPKFVPLVESNEYSSAIAKK FT VVAETLRPLKNEGLDTLILGCTHYPLLRPIIQNTLGDSVTLIDSGAETVSEVSTILDYF FT NLAVDSQNKEKAERNFYTTGSSQMFHAIASEWLQLDDLAVEHITLG" FT CDS 1534..>2626 FT /codon_start=1 FT /transl_table=11 FT /gene="rph" FT /product="ribonuclease PH" FT /db_xref="GOA:Q9L4V4" FT /db_xref="HSSP:1R6L" FT /db_xref="InterPro:IPR001247" FT /db_xref="InterPro:IPR002381" FT /db_xref="InterPro:IPR002637" FT /db_xref="InterPro:IPR015847" FT /db_xref="InterPro:IPR018336" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q9L4V4" FT /protein_id="AAF72714.1" FT /translation="MRTNTRKNDELRLVTIETNYLKHPEGSVLVSFGDTKVICNATVEP FT KVPPFMRGQGKGWVHAEYAMLPRATNTRTIREAAKGKLTGRTMEIQRLIARSLRSVIDL FT EKLGERAITVDCDVIQADGGTRTASITGAFVALKMAIQTLLDSGQLTEDPVKENIAAVS FT VGITKQGEAVLDLDYLEDSSAAVDMNLFMTANGEFFELQGTGEEATFSNDQLMEMLELG FT KKGLNELFQIQTQALKESKVKKAIQAPVMTDTILIATKNPGKAREFEALFAKKGLFVKT FT LLDYPEIPEVEETGTTFAENALLKAETIAATLNMMVLADDSGLKVDALEGRPGVYSARY FT AGEPKSDAANNAKLLHELADFPPA" XX SQ Sequence 2626 BP; 859 A; 437 C; 563 G; 767 T; 0 other; ctgcagaaag tttttcctca tctgtttggt tgaagacaaa ataagtgtct ggtttagcaa 60 ttgtgcttag gtctttggta tcttgctgta aagtaatcaa gacgcttttt gcttttgatt 120 ttatctcgta gatagcttcg gtataaagac tttcttgttg ttgaatttgt tcggctaaaa 180 aaccagcttc caaattaaaa ctaggctctt tcaccattgc taaccggttt tcaactacaa 240 agccagaaag tcggaaaatg actttgtttt tatggtggct atctactgtt aaggtgccga 300 accctgcttt tttaaagaaa aggattgtat cctgctgatt atttaaagga tattgtctgg 360 ctagctcttt accggcccaa taaaggattt catttgtttc ctgacctaat aaattgggaa 420 tcagcgcatc acgaattaaa gtgtaactga ataatgaatc atttccttca acaatgttta 480 aatcaactga atttctttgg tcattcattg gtttttattc acctctctgt ttttcctaat 540 ctattataac gtggaatgac agagaaccta tctttttgtt aggatgctta tcggaactta 600 atagaaagat aagtattttc ttattgtgct tgaatttttc ttgaaaaaaa gcgaagatag 660 agataagaaa aaattgactt taaataaagg ttgttaaata tgaaaaaaca agcaatagga 720 tttattgatt caggtgtagg aggattgact gtcgttaaag aagctatgcg gcaattgcca 780 aatgaatcca tttattatgt cggcgatact gccagatgcc cgtatggtcc gagacctgaa 840 gatcaagtaa gaaaattcac ttgggaaatg acacattttt tattggataa aaatattaaa 900 atgctcgtga ttgcctgcaa cacagcaaca gcagctgcgt taaaagatat taagaaaaaa 960 cttgcgattc cggttattgg agtgattttg ccaggaagtc gagcagctat aaaggctact 1020 cacactaatc gaatcggtgt gatcggaaca gaaggaacag ttaaaagcaa tcaatacaaa 1080 aaaatgattc attcgaaaga cactaaagca cttgttacca gcttagcgtg ccctaagttt 1140 gttccattag ttgaaagcaa cgaatacagc agtgccatcg ctaaaaaagt tgtggccgag 1200 acattgcggc cattaaaaaa tgaagggcta gatacgctta tcctaggctg tacacattat 1260 cctttattgc gtccgattat tcaaaatacg ttgggtgact ccgttacatt gattgattca 1320 ggtgcggaaa cggttagtga agtaagtacg attctagatt attttaacct agctgtggat 1380 agccaaaata aagaaaaagc agaacgcaat ttctatacaa ccggttcgtc acaaatgttt 1440 catgcgattg cttctgaatg gttgcagctg gatgatttag ctgtagaaca tattacttta 1500 ggataaaaaa tttgtttaga atagaggaga aaaatgcgaa caaatacacg aaaaaatgat 1560 gagcttcgtt tagtgacaat agaaacaaat tatttaaaac accctgaagg ttctgtgctg 1620 gtatcttttg gcgatacaaa agtaatctgc aatgcgactg ttgaacctaa agtaccgccc 1680 tttatgcggg gacagggaaa agggtgggtc catgcagaat atgctatgtt gcctagagcg 1740 acaaatacgc ggacaattcg tgaagcagct aaaggaaaat taaccggaag aaccatggag 1800 atccaacgac tgattgctcg ttctttgcgt tctgttattg atttggagaa gttgggtgag 1860 cgcgccatca cggtggactg tgacgttatt caggctgatg gcggcactag aacggctagc 1920 atcactggag cttttgttgc gttaaaaatg gctattcaaa cgttgctgga cagtggtcaa 1980 ctgacggaag atcctgttaa agaaaatata gcagctgtca gtgtagggat cacaaaacaa 2040 ggagaagctg ttttggattt ggattatcta gaagatagtt cagcagcagt tgatatgaat 2100 ttattcatga cagctaacgg cgagtttttt gaactacaag gtaccggaga agaagctaca 2160 ttttctaatg atcaattaat ggaaatgttg gaattgggta aaaaagggct aaatgaatta 2220 ttccaaattc aaacgcaagc ccttaaagaa agcaaagtga aaaaagccat tcaagcaccg 2280 gttatgacgg atactattct aattgctact aaaaaccctg ggaaagcacg cgaatttgaa 2340 gcattatttg caaaaaaagg attattcgtt aaaacactgc ttgattatcc agaaattcct 2400 gaagtagaag aaacaggaac aacgtttgcc gagaatgcct tattaaaagc cgaaacaatt 2460 gctgctacct taaatatgat ggtactggca gatgattctg gtttgaaagt cgatgcatta 2520 gaaggaagac ctggcgtata ttcagctaga tatgccggcg aacctaagag tgatgctgca 2580 aataacgcaa aattattaca tgaattggct gattttccac ctgcag 2626 // |
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