 |
|
EBI DbfetchID AF251793; SV 1; linear; genomic DNA; STD; PRO; 3000 BP. XX AC AF251793; XX DT 17-MAY-2000 (Rel. 63, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Aeromonas hydrophila extracellular chitinase ChiA (chiA) gene, complete DE cds. XX KW . XX OS Aeromonas hydrophila OC Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; OC Aeromonadaceae; Aeromonas. XX RN [1] RP 1-3000 RA Roffey P.E., Pemberton J.M.; RT "Cloning and expression of an Aeromonas hydrophila chitinase gene in RT Escherichia coli"; RL Curr. Microbiol. 21:329-337(1990). XX RN [2] RP 1-3000 RA Schmidt R., Pemberton J.M.; RT "Sequence and characterization of ChiA, the major chitinase of Aeromonas RT hydrophila JMP636"; RL Unpublished. XX RN [3] RP 1-3000 RA Pemberton J.M., Schmidt R., Roffey P.E.; RT ; RL Submitted (03-APR-2000) to the EMBL/GenBank/DDBJ databases. RL Microbiology & Parasitology, University of Queensland, St. Lucia, QLD 4072, RL Australia XX DR RFAM; RF01051; GEMM_RNA_motif. XX FH Key Location/Qualifiers FH FT source 1..3000 FT /organism="Aeromonas hydrophila" FT /strain="JMP636" FT /mol_type="genomic DNA" FT /db_xref="taxon:644" FT CDS 300..2900 FT /codon_start=1 FT /transl_table=11 FT /gene="chiA" FT /product="extracellular chitinase ChiA" FT /db_xref="GOA:Q9L5D5" FT /db_xref="HSSP:1EDQ" FT /db_xref="InterPro:IPR000601" FT /db_xref="InterPro:IPR001223" FT /db_xref="InterPro:IPR001579" FT /db_xref="InterPro:IPR003610" FT /db_xref="InterPro:IPR011583" FT /db_xref="InterPro:IPR013540" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014756" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q9L5D5" FT /protein_id="AAF70180.1" FT /translation="MFSPKHSLLALLVGGLCSTSALAAAPGKPTIGWGETKFAIIQVDQ FT AATSYNKLVTVHKDGAPVSVTWNLWSGDVGQTAKVLLDGKEVWSGAASAAGTANFKVTK FT GGRYQMQVALCNADGCTLSDKKEIVVADTDGSHLAPLNAPLQENNKPYTNKAGKVVGAY FT YVEWGVYGRKFTVDKIPAKNLTHILYGFTPICGGNGINDSLKEISGSFEALQRSCAGRE FT DFKVSIHDPWAAVQMGQGNLTAFDEPYKGNFGNLMALKKANPNLKILPSVGGWTLSDPF FT YFFSDKTKRDTFVASMKEYLQTWKFFDGVDIDWEFPGGQGANPNLGGPNDGATYVALMK FT ELRAMLDELEAETGRQYELTSAISAGGDKIAKVDYQAAQQYMDYIFLMSYDFSGAFDLK FT NLAHQTNLYASSWDPATKYTTDKGVKALLGQGVTPGKVVVGAAMYGRGWTGVNGYQAGN FT PFTGSATGPIKGTWENGVVDYRDIVNNRMGAGWEQGYDETAEAPYVFKASTGDLISFDN FT DRSVKAKGQYVLANQLGGLFAWEIDADNGDILNAMHEGLGNGDGGTTPPVNKPPVANAG FT SDLSVTGPAEVTLNGAASHDPESGVLSYSWKQVSGPQVSLLDATQAKARVVLDAVSADI FT NLVFELTVTDDHNLTAKDQVVVTNKAPQPNLPPVVTVPATASVESGKQVTIKATASDPN FT GDALTYQWSLPAGLTATGQNSATLVVTGPSVTSDTAYDLSLVVTDGSLDASAGTRLTVK FT PASTGGGCEATDPDAANHPAWSASAVYNTNAKVSHKQLVWQAKYWTQGNEPSQTADQWK FT LLSAVQLGWNAGVAYNAGDLTNHNGRKWKAQYWTKGDEPGKAAVWVDQGAASCN" XX SQ Sequence 3000 BP; 645 A; 955 C; 891 G; 509 T; 0 other; tgaaaaaagt gagtccctgt tactgtcatt tctactaggt ggcgggatca tttctctcat 60 ctatagtcat tcggcgatta ttttcatcgc aaatcaagtt gtgcaaaaaa ggcaaaccgg 120 gatgaaagtc cgggacgcaa agcctccggt ctaagggtca aagcacctag gatagcgggg 180 ccaccacagg ttgtatcgtc catggagcca agccatggta tcgatttgtc tgcgttacct 240 gtccggtcgc gttgcctttt tcgttgttca taccaataac gaaataagga agttcaacta 300 tgttcagtcc aaaacattcc ctgctggcat tgctggtcgg ggggctctgt tctacctccg 360 ccctcgctgc cgcccccggc aaacccacca tcggctgggg tgaaaccaag ttcgccatca 420 tccaggtcga tcaggccgcc acctcctaca acaagctggt cactgtccac aaggacggcg 480 ccccggtcag cgtgacctgg aacctctggt ccggcgatgt gggccagacc gccaaggtac 540 tgctcgatgg caaggaagtc tggtccggcg ccgccagtgc ggcgggcacc gccaacttca 600 aggtcaccaa gggtggccgc tatcagatgc aggtggccct gtgcaacgcc gacggctgca 660 ccctatccga caagaaggag atagtggtgg ccgacacgga cggcagccac ctggcgccgc 720 tcaatgcgcc cctgcaagag aacaacaagc cttacaccaa caaggccggc aaggtggtcg 780 gggcctacta cgtggagtgg ggcgtctatg gccgcaagtt caccgtggac aagatcccgg 840 ccaagaacct gacccacatc ctctatggct tcacccccat ctgtggcggt aacggcatca 900 acgacagcct gaaagagatc tcaggcagct tcgaggcact gcagcgctcc tgcgccggcc 960 gtgaggactt caaggtctcc atccatgatc cctgggccgc ggtccagatg gggcagggca 1020 atctcaccgc cttcgacgag ccctacaagg gcaacttcgg caacctgatg gcgctgaaga 1080 aagccaaccc aaacctcaag atcctgcctt ccgtgggtgg ctggaccctg tccgacccct 1140 tctacttctt cagtgacaag accaagcgcg acaccttcgt cgcctccatg aaggagtacc 1200 tgcagacctg gaaattcttc gatggcgtgg acatcgactg ggagttcccg ggtggccagg 1260 gtgccaaccc caatctgggt ggcccgaacg atggcgccac ctatgtggcc ctgatgaaag 1320 agctgcgcgc catgctggac gagctggaag ccgagaccgg ccgccagtat gagctcacct 1380 cggccatcag cgccggcggc gacaagattg ccaaggtgga ctatcaggct gcccagcagt 1440 acatggatta catcttcctg atgagctacg acttcagcgg cgccttcgat ctgaagaacc 1500 tggctcacca gaccaacctc tatgcatcaa gctgggatcc ggccaccaag tacaccaccg 1560 acaagggcgt caaggcgctg ctcggccagg gtgtgactcc gggcaaggtc gtggtcggtg 1620 cggccatgta tggccgtggc tggaccgggg tcaatggcta tcaggccggc aaccccttca 1680 ccggcagtgc gaccggtccc atcaagggca cctgggagaa tggcgtggtg gattaccgcg 1740 atatcgtcaa caaccgcatg ggcgcgggct gggagcaggg ctatgacgaa acggcggaag 1800 cgccttacgt cttcaaggcg agcaccggcg atctcatcag cttcgacaac gatcgctcgg 1860 tcaaggccaa ggggcagtac gtgctggcca accagctcgg cggcctgttc gcctgggaga 1920 tcgatgcgga taacggcgac atcttgaacg ccatgcacga agggctcggc aacggggacg 1980 gcggcaccac gccaccggtc aacaagccgc ccgtggccaa tgcaggtagc gatctgagcg 2040 tcacaggccc ggccgaggtg accctcaacg gcgccgcctc ccatgacccc gagagcggtg 2100 tgctgagcta cagctggaag caggtctctg gcccgcaggt cagcctgctc gatgctactc 2160 aggccaaggc ccgggtagtg ttggacgccg tcagcgccga catcaacctg gtgttcgagc 2220 tgaccgtcac cgacgatcac aacctcacgg ccaaggatca ggtggtggtg accaacaagg 2280 cgccgcagcc taacctgccg cccgtagtga cggtaccggc caccgccagc gtcgaatccg 2340 gcaagcaggt gaccatcaag gccaccgcct ccgatccgaa cggcgacgcc ctgacctatc 2400 agtggagcct gcctgcgggt ctcaccgcca ccggtcagaa cagcgcgacc ctggtagtca 2460 caggcccgag cgtcaccagc gacaccgcct atgacctgag cctggtggtc accgacggct 2520 ctctggatgc cagtgccggc acccgtctga ccgtcaaacc ggcgagcact gggggtggct 2580 gtgaggcaac cgatccggat gcggccaacc acccggcctg gagcgccagc gccgtctaca 2640 acaccaatgc caaggtgagc cacaagcagc tagtgtggca agccaagtat tggacccagg 2700 gcaacgagcc aagccagacc gcggatcagt ggaagctgct gagtgcggtg cagctcggct 2760 ggaatgccgg ggtggcctat aacgccggcg acctgaccaa ccacaacggt cgcaagtgga 2820 aggcccagta ctggaccaag ggtgacgagc ccggcaaggc cgccgtctgg gttgaccagg 2880 gtgctgccag ctgtaactga gtgacatcat gacccaagca atggggcccg gtgccccatt 2940 gctttctcca cccaccttcc cgacctgcca gatattccca atctgctatc agaacgtcgt 3000 // |
|