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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF250958; SV 1; linear; mRNA; STD; PLN; 1235 BP.
XX
AC   AF250958;
XX
DT   23-NOV-2000 (Rel. 65, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Lycopersicon esculentum peptide deformylase-like protein mRNA, complete
DE   cds.
XX
KW   .
XX
OS   Solanum lycopersicum
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC   Lycopersicon.
XX
RN   [1]
RP   1-1235
RX   DOI; 10.1093/emboj/19.21.5916
RX   PUBMED; 11060042.
RA   Giglione C., Serero A., Pierre M., Boisson B., Meinnel T.;
RT   "Identification of eukaryotic peptide deformylases reveals universality of
RT   N-terminal protein processing mechanisms";
RL   EMBO J. 19(21):5916-5929(2000).
XX
RN   [2]
RP   1-1235
RA   Giglione C., Meinnel T.;
RT   ;
RL   Submitted (31-MAR-2000) to the EMBL/GenBank/DDBJ databases.
RL   Institut des Sciences Vegetales, CNRS, 1 Avenue de la Terrasse, Gif/Yvette
RL   91198, France
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1235
FT                   /organism="Solanum lycopersicum"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:4081"
FT   CDS             67..906
FT                   /codon_start=1
FT                   /product="peptide deformylase-like protein"
FT                   /db_xref="GOA:Q9FV54"
FT                   /db_xref="HSSP:1LME"
FT                   /db_xref="InterPro:IPR000181"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9FV54"
FT                   /protein_id="AAG33972.1"
FT                   /translation="MAMAAASWASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLF
FT                   FSASSNKPPKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRI
FT                   DNFDANLKKLVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRV
FT                   SRYSRRIIPYEEGCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFD
FT                   HLQGVLFFDKMTDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS"
XX
SQ   Sequence 1235 BP; 367 A; 220 C; 276 G; 372 T; 0 other;
     acgaaggaca aaattagtaa tatttgcatc tgtagaggtg aaattgtccg ttttgttgtg        60
     tggcaaatgg caatggctgc cgcaagttgg gcatcttctt cttcgttcac tcgctttctc       120
     cggcctctcc tcagtcggaa ctcgtctccc tcccctatca gttacagtct tcatcgatat       180
     aaatcagcta actgtttatt tttctccgca agcagtaata aacctccaaa attagctgtt       240
     tatgctcaag ctaggcgagt tttatcttcc aaaaccaaag gagatgaaat agcaactcct       300
     gctgacttga gcttcgtggt tccattgaaa attgtggagt atccagaccc gattttaaga       360
     gcgaagaata agaggattga caattttgac gctaatttga agaagttagt tgatgaaatg       420
     ttcgatatta tgtacaaaac tgatggcatt gggctgtctg caccacaagt tggaatgaat       480
     gttcaactaa tggtatttaa tgcagccggt gaacgtggag agggggagga gattgttctc       540
     gtcaatccac gtgtcagtag atattctagg aggattatac cttatgaaga aggttgctta       600
     tcttttccaa tgatacatgg tgatgttaag agaccagagt cagttaaggt tgacgcacag       660
     gacattaatg gtacaaggtt tgagataagc ttgtctgctc ttccagcacg agtctttcaa       720
     catgaatttg atcacctaca gggagttctt ttctttgaca aaatgactga cgaagtcctg       780
     gacaccattc gtgaaaaatt agtggcgcta gaaaagaaat atgaagatag gactgggttg       840
     ccaacccctg aaagcataaa tacacgaaaa ataaagaagg ctgctgttgg atttggcaaa       900
     tcatgaattt actgggatct atgaaatctt ctcagtattt gtatgatgaa gcacaaaatg       960
     ggattgccag cttttgctga actttggtat atgccattaa tttagacact tgtgctttgt      1020
     gaaactagcc aaaagtgtgg cctctgaggt ttatccttgt actgatactg ctctgtttag      1080
     gaatgatagg gttaccacag aaatttgtat ggaaaaagaa ctgttaagta catttgatca      1140
     aatattgaac accaagtttg tcgtttaaca cttgggttgt tgtagttcag tgtggagaaa      1200
     aacaactcaa gagaagttcc ataagttccc cagca                                 1235
//
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