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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF250773; SV 1; linear; genomic DNA; STD; ENV; 1003 BP.
XX
AC   AF250773;
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DT   31-JAN-2001 (Rel. 66, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Uncultured bacterium pCosHE1 ElsB (elsB) and ElsC (elsC) genes, partial
DE   cds.
XX
KW   .
XX
OS   uncultured bacterium pCosHE1
OC   Bacteria; environmental samples.
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RN   [1]
RP   1-1003
RX   DOI; 10.1128/AEM.67.1.89-99.2001
RX   PUBMED; 11133432.
RA   Entcheva P., Liebl W., Johann A., Hartsch T., Streit W.R.;
RT   "Direct cloning from enrichment cultures, a reliable strategy for isolation
RT   of complete operons and genes from microbial consortia";
RL   Appl. Environ. Microbiol. 67(1):89-99(2001).
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RN   [2]
RP   1-1003
RA   Entcheva P., Liebl W., Streit W.R.;
RT   ;
RL   Submitted (31-MAR-2000) to the EMBL/GenBank/DDBJ databases.
RL   Mikrobiologie und Genetik, Universitaet Goettingen, Grisebachstr. 8,
RL   Goettingen 37077, Germany
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FH   Key             Location/Qualifiers
FH
FT   source          1..1003
FT                   /organism="uncultured bacterium pCosHE1"
FT                   /environmental_sample
FT                   /mol_type="genomic DNA"
FT                   /clone="pCosHE1"
FT                   /note="unknown organism, cosmid clone derived from
FT                   environmental consortium"
FT                   /db_xref="taxon:143796"
FT   gene            <1..404
FT                   /gene="elsB"
FT   CDS             <1..404
FT                   /codon_start=3
FT                   /transl_table=11
FT                   /gene="elsB"
FT                   /product="ElsB"
FT                   /note="similar to hypothetical 30.2 kDa protein in
FT                   modC-bioA intergenic region; putative"
FT                   /db_xref="HSSP:1RI6"
FT                   /db_xref="InterPro:IPR015943"
FT                   /db_xref="UniProtKB/TrEMBL:Q9APQ2"
FT                   /protein_id="AAG60568.1"
FT                   /translation="RVNVWXXKDPTGKXRGSXRLEMNPSNFLETRWAADIPITPDGRHL
FT                   YACNGTSSLITILSVSEDGSVLAVEGFQPTETQPRGFNIDHSGKYLIAAGQKSHHIALY
FT                   EIKGEQGLLEEKGRYAVGQGPMWVVVNAH"
FT   gene            complement(512..>1003)
FT                   /gene="elsC"
FT   CDS             complement(512..>1003)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="elsC"
FT                   /product="ElsC"
FT                   /note="similar to hypothetical protein in modC-bioA
FT                   intergenic region; putative"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:Q9APQ1"
FT                   /protein_id="AAG60569.1"
FT                   /translation="LQNNRLTRTLVTNSYIEGDVDMVSGRGAVVFDNTDFRVVNSRTQQ
FT                   EGYVFAPATQSNLFYGFLAVNSRFNASGDGVAQLGRSLDVDSATNGQVVIRDSVINEGF
FT                   NVAKPWADAAISKRPFSGNTGSVDDKGNVQRNLNDANFNRMWEYNNRGLGSKVVAEPKQ
FT                   "
XX
SQ   Sequence 1003 BP; 233 A; 268 C; 286 G; 211 T; 5 other;
     ttcgggtgaa cgtctggnaa ntgaaagatc ctacgggcaa atnnaggggg tccaancgcc        60
     tggaaatgaa tccgtctaac tttctggaaa cccgctgggc ggcggatatt cccattacgc       120
     cggatggtcg ccatctctac gcctgtaacg gtacttccag cctgatcacc atcttaagcg       180
     tctcggaaga cggcagcgtg ctggcagtag aaggcttcca gccgacggaa acgcagccgc       240
     gtggctttaa tatcgatcac agcggtaaat acctgattgc agcggggcag aagtctcacc       300
     acatcgccct gtacgaaatc aaaggcgagc agggcctgct ggaagaaaaa gggcgctatg       360
     cggtaggcca gggtccgatg tgggtagtgg ttaacgctca ctaagcggct ttaaaacaaa       420
     aaccctcgcg aacgcgaggt ttttttatgc ccgatggtac tgcattaacg gacaggccgg       480
     gtaaggcgaa gccgccaccc ggcaaaacag attactgctt cggctcagca accactttgc       540
     tacccagacc gcggttgttg tattcccaca tgcggttgaa gttagcgtcg ttcaggttgc       600
     gctgcacgtt tcctttatcg tccacggaac cggtattgcc ggagaatgga cgtttggaga       660
     tggcggcgtc agcccatggt tttgccacgt tgaaaccttc gttgataacg ctgtcgcgga       720
     tcacaacctg accgttggtt gcagagtcca cgtccaggga gcgacccagc tgcgccacgc       780
     cgtcaccgga ggcgttgaag cggctgttga cggcgaggaa accgtaaaac aggttagact       840
     gtgtcgctgg cgcaaagaca taaccttcct gctgggtacg tgagttcacg acgcggaaat       900
     cggtgttatc aaataccacc gcgccacgac cggagaccat atccacatca ccttcgatgt       960
     agctgttggt caccagcgta cgggtcagac ggttattctg cag                        1003
//
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