spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF225302; SV 1; linear; genomic DNA; STD; VRT; 825 BP.
XX
AC   AF225302;
XX
DT   21-APR-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Bambusicola thoracica clone 6 endogenous ASLV retrovirus gag polyprotein
DE   (gag) gene, partial cds.
XX
KW   .
XX
OS   Bambusicola thoracica (Chinese bamboo-partridge)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves;
OC   Neognathae; Galliformes; Phasianidae; Perdicinae; Bambusicola.
XX
RN   [1]
RP   1-825
RX   DOI; 10.1128/JVI.74.9.3984-3995.2000
RX   PUBMED; 10756010.
RA   Dimcheff D.E., Drovetski S.V., Krishnan M., Mindell D.P.;
RT   "Cospeciation and horizontal transmission of avian sarcoma and leukosis
RT   virus gag genes in galliform birds";
RL   J. Virol. 74(9):3984-3995(2000).
XX
RN   [2]
RP   1-825
RA   Dimcheff D.E., Drovetski S.V., Krishnan M., Mindell D.P.;
RT   ;
RL   Submitted (14-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Department of Biology and Museum of Zoology, University of Michigan, 1109
RL   Geddes Ave, Ann Arbor, MI 48109-1079, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..825
FT                   /organism="Bambusicola thoracica"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="T1066"
FT                   /clone="6"
FT                   /db_xref="taxon:9083"
FT   repeat_region   <1..>825
FT                   /rpt_family="endogenous ASLV retrovirus"
FT                   /rpt_type=DISPERSED
FT   CDS             <1..>825
FT                   /codon_start=2
FT                   /gene="gag"
FT                   /product="gag polyprotein"
FT                   /db_xref="GOA:Q9I9Z6"
FT                   /db_xref="HSSP:1A6S"
FT                   /db_xref="InterPro:IPR008919"
FT                   /db_xref="UniProtKB/TrEMBL:Q9I9Z6"
FT                   /protein_id="AAF64683.1"
FT                   /translation="ACKTYCGKNSPSKKEIGTLLSLLQKEGLLTSPSDLYTPGLWDSIT
FT                   AALAQRAMVLGKSGELKTWGLVLGALKAAREEQATSEQARFWLGLGGGKVSPTGPAGGP
FT                   AAEPQNGGEEKAVTAQQETKMAPGEATAPKATSCYRCGTGAGCSCATVAPSAPPPYVGS
FT                   GLYPSLEGLGGPGGESVATSLAGRDDPPRGVEKATSLAGRDDPPRGVESVATSLAGRDD
FT                   PPRGVEQRAEPRCSDLAPGPALTDWARIREELAAAAPSVVAMPVVIKTEGPA"
XX
SQ   Sequence 825 BP; 162 A; 206 C; 308 G; 149 T; 0 other;
     cgcgtgtaag acctattgcg ggaaaaattc tccttctaag aaggaaatag ggacactgtt        60
     gtctctttta caaaaggagg gactgcttac atctccctca gatctttata ccccgggact       120
     ctgggattcc attaccgcgg ctcttgccca gcgggcgatg gtactcggga aatcagggga       180
     gttgaaaacc tggggactgg tcttgggggc gctgaaggca gcacgagagg agcaggctac       240
     atctgaacaa gcgcggttct ggctgggctt ggggggaggg aaggtttctc ccacaggtcc       300
     tgcaggaggg ccggccgcgg agcctcagaa cggcggagag gaaaaggcag tgactgcgca       360
     gcaagagacg aagatggcgc cgggggaggc gaccgcgcct aaagccacat cttgttatcg       420
     ttgcggaacg ggcgctggct gcagttgcgc cacagttgcc ccttcggccc cccctcctta       480
     cgtggggagt ggcttgtatc cttctttgga ggggctggga gggccggggg gagagagtgt       540
     agccacgtca ctggcggggc gggatgatcc gccccgaggg gtggagaaag ccacgtcact       600
     ggcggggcgg gatgatccgc ctcgaggggt ggagagtgta gccacgtcac tggcggggcg       660
     ggacgatccg ccccgagggg tagagcaaag ggcggagccg agatgttccg acttggcccc       720
     cgggccagct ttgactgatt gggcgaggat tagggaagag cttgcagcgg cggctccgtc       780
     cgtggtggct atgcccgtgg tgataaaaac ggagggaccg gcttg                       825
//
spacer
spacer