EBI Dbfetch

ID   AF222337; SV 1; linear; mRNA; STD; ROD; 309 BP.
XX
AC   AF222337;
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DT   17-MAY-2000 (Rel. 63, Created)
DT   05-JUL-2000 (Rel. 64, Last updated, Version 2)
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DE   Rattus norvegicus voltage gated N-type calcium channel alpha1B mRNA,
DE   partial cds, alternatively spliced.
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KW   .
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OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
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RN   [1]
RP   1-309
RX   PUBMED; 10864934.
RA   Pan J.Q., Lipscombe D.;
RT   "Alternative splicing in the cytoplasmic II-III loop of the N-type Ca
RT   channel alpha 1B subunit: functional differences are beta
RT   subunit-specific";
RL   J. Neurosci. 20(13):4769-4775(2000).
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RN   [2]
RP   1-309
RA   Pan J.Q., Lipscombe D.;
RT   ;
RL   Submitted (07-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Pharmacology and Neuroscience, Brown University, Box 1953,
RL   Providence, RI 02912, USA
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DR   ASTD; TRAN00000002998.
DR   Ensembl-Gn; ENSRNOG00000004560; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000006162; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000042895; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000045118; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000048945; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000065645; Rattus_norvegicus.
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FH   Key             Location/Qualifiers
FH
FT   source          1..309
FT                   /organism="Rattus norvegicus"
FT                   /strain="Sprague-Dawley"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:10116"
FT   CDS             <1..>309
FT                   /codon_start=1
FT                   /product="voltage gated N-type calcium channel alpha1B"
FT                   /note="CACHA1B; alternatively spliced; contains putative
FT                   intracellular loop between domain II and III"
FT                   /db_xref="GOA:Q9JIK0"
FT                   /db_xref="InterPro:IPR005447"
FT                   /db_xref="UniProtKB/TrEMBL:Q9JIK0"
FT                   /protein_id="AAF70136.1"
FT                   /translation="EEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSR
FT                   SSSVSSVNSPRQQNSAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERLRYASTRH"
XX
SQ   Sequence 309 BP; 77 A; 88 C; 88 G; 56 T; 0 other;
     gaggagatgg aagaggcagc caatcagaag cttgctcttc agaaggccaa agaagtagct        60
     gaagtcagcc ccatgtctgc tgccaacatc tccattgctg cttttgtaaa gcaaactcga       120
     ggtactgtat ctcgcagctc atctgtctcc agcgtaaact cacccaggca gcagaactcg       180
     gccaaggcgc gctcagtatg ggagcagcgg gccagtcagc taaggctcca gaacctgcgt       240
     gccagctgtg aggcactgta cagtgagatg gacccggagg agcgcctgcg ttatgccagc       300
     acgcgccac                                                               309
//