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EBI DbfetchID AF222020; SV 1; linear; genomic DNA; STD; PRO; 2411 BP. XX AC AF222020; XX DT 15-FEB-2000 (Rel. 62, Created) DT 26-OCT-2000 (Rel. 65, Last updated, Version 2) XX DE Pseudomonas syringae pv. syringae alginate lyase (algL) gene, complete cds. XX KW . XX OS Pseudomonas syringae pv. syringae OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas; Pseudomonas syringae. XX RN [1] RP 1-2411 RX DOI; 10.1128/JB.182.21.6268-6271.2000 RX PUBMED; 11029455. RA Preston L.A., Wong T.Y., Bender C.L., Schiller N.L.; RT "Characterization of alginate lyase from Pseudomonas syringae pv. RT syringae"; RL J. Bacteriol. 182(21):6268-6271(2000). XX RN [2] RP 1-2411 RA Preston L.A., Schiller N.L.; RT ; RL Submitted (06-JAN-2000) to the EMBL/GenBank/DDBJ databases. RL Division of Biomedical Sciences, University of California at Riverside, RL B600 Statistics, Riverside, CA 92521, USA XX FH Key Location/Qualifiers FH FT source 1..2411 FT /organism="Pseudomonas syringae pv. syringae" FT /strain="FF5" FT /mol_type="genomic DNA" FT /note="pathovar: syringae" FT /db_xref="taxon:321" FT RBS 467..470 FT /gene="algL" FT /note="putative" FT CDS 477..1613 FT /codon_start=1 FT /transl_table=11 FT /gene="algL" FT /product="alginate lyase" FT /EC_number="4.2.2.3" FT /note="mannuronate-specific" FT /db_xref="GOA:Q9L7P2" FT /db_xref="InterPro:IPR008397" FT /db_xref="InterPro:IPR008929" FT /db_xref="UniProtKB/Swiss-Prot:Q9L7P2" FT /protein_id="AAF32371.1" FT /translation="MQTPKLIRPTLLSMAILSSMAWATGASAALVPPKGYDAPIEKMKT FT GDHNFSCEAIPKPYTDKLVFRSKYEGSDKARATLNAVSEEAFRDATKDITTLERGVSKV FT VMQYMRDGRPEQLDCALNMMTTWAKADALESREFNHTGKSMRKWALGSMSSAYLRLKFS FT ESHPLANRQQDAKIIETWFSKLADQVVSDWSNLPLEKINNHSYWAAWSVMATAVATNRQ FT DLFDWAVKEYKVAANQVDKDGFLPNEMKRRQRALSYHNYALPPLAMIASFAQANGVDLR FT PENNGALKRLGDRVLAGVKDPSIFAEHNGEKQDMTDLKKDPKFAWLEPYCSLYTCSPDV FT LEEKHEKQPFKTFRLGGDLTKVYDPTHEKGDKGDNDGS" XX SQ Sequence 2411 BP; 560 A; 704 C; 676 G; 471 T; 0 other; tcgccgctgt atcgcctgga tcaggagacc atctatcgcc agatgatgtc gctgctggac 60 aacggctgtg aaggcaagcc tgccgtcatg agcgccagca ccacgcttaa gccgggtacc 120 aacgaactgc tggtcaatgg caagaatggc atcaaggaca ttcgcaacgg cagcaatcag 180 atcgacatca agtttgacga cacctcggtg aaagtccttc aggccagact ctggtacatg 240 aacggtcgcc atgaggatct gaaaatcgag aaaccggaaa cgtcagacac cgatggacgc 300 ttcgcctttg aattgcgcga ggatgaggat tgggccaacc agcaactgct ggcgctggaa 360 gtccagggac cggaagcagg cacggcacca caaaaagtcg aagccaaagt atgcaaacgc 420 aacgtgttcc cgagcgctgc gacacacacc gctcaagccg gactatgagg tgacttatgc 480 agactcctaa actgatacgc cctaccctgc tgtcgatggc aatcctgtca tcgatggcgt 540 gggccacggg cgcgtccgcc gcactggttc cacccaaggg ctatgacgcc ccgatcgaaa 600 aaatgaagac gggcgatcac aacttcagct gtgaagccat tccaaagccc tacaccgaca 660 agctggtctt ccgcagcaag tacgagggtt cggacaaagc acgcgcaacg ctcaatgcgg 720 tatccgaaga agcgttccgc gacgcgacca aggacatcac cacccttgag cgtggcgtca 780 gcaaagtcgt gatgcagtac atgcgcgacg gtcgtccgga acaactcgat tgtgcgctga 840 acatgatgac cacctgggcc aaggccgatg cgctggagtc gcgcgagttc aaccacaccg 900 gcaaatccat gcgcaaatgg gcactgggca gcatgtcctc cgcctacctg cgtctgaagt 960 tctccgagtc gcacccgctg gccaatcgtc agcaagacgc gaagatcatc gagacctggt 1020 tcagcaagct ggccgatcag gtggtcagcg actggagcaa tctgccgctg gaaaaaatca 1080 acaaccactc gtactgggct gcctggtcgg tgatggcaac cgctgtcgcc accaatcgtc 1140 aggacctgtt cgactgggcc gtgaaggaat acaaggtcgc tgccaatcaa gtggacaagg 1200 acggtttcct gcccaacgag atgaagcgcc gtcagcgggc actgtcgtat cacaactatg 1260 cactgccgcc gctcgcgatg attgccagct tcgcccaggc caatggcgtg gacctgcgtc 1320 cggaaaacaa tggcgccttg aagcgtctgg gcgaccgggt gctggccggc gtcaaggatc 1380 cttcgatttt cgctgaacac aacggcgaga aacaggacat gacggacctg aagaaagatc 1440 cgaaattcgc ttggctcgaa ccgtactgct cgctctacac ctgcagcccg gatgtgcttg 1500 aagagaaaca cgaaaagcag ccattcaaga cattccgtct gggcggtgac ctgaccaagg 1560 tctacgaccc gacgcacgag aaaggcgaca agggcgataa cgacggttcg tgattcacag 1620 agttctttgt gggagcgggc ttgctcgcga agaggcacgc ccaggcgctg aatccgtaag 1680 accggacctc gcctgagctg cctcaccgac aagccgtaac gcgacgtgtt ttacccccca 1740 atttcaacgg ggggtttggg ggggctttgg cccttgaatg ttggacaaac ggagagataa 1800 ggatggtttt ctcatccaac gtgttcctgt tcctgttcat gccgattttc ctcggcttgt 1860 actacctgag cgggcaacgc tatcgcaatc tgctgctgct gattgccagc tatatcttct 1920 acgcctggtg gcgagtggac tttctggcgc tgttcgtcgg cgtgaccgtc tggaactact 1980 ggatcggtct caaggtaggc gcagcaggtg tgcggaccaa gccggcacag aaatggttgc 2040 tgcttggcgt aatagtggac ctgtgtattc tgggctactt caaatacgcc aacttcggcg 2100 tggacagcat caacgcagcc atgacctcga tgggtctgga accgttcatc ctgactcacg 2160 tgctgttgcc gatcggtatc tcgttctatg tcttcgagtc catcagctac atcatcgacg 2220 tttaccgcgg cgatactccg gccacgcgca atctgatcga cttcgctgca ttcgtcgcga 2280 tcttcccgca cctgatcgcc ggccctgtgc tgcgtttccg cgatctggcc gaccagttca 2340 acaaccgtac acacacgctg gacaagttct ccgaaggtgc cacgcgcttc atgcagggct 2400 tcatcaagaa a 2411 // |
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