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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF214487; SV 1; linear; genomic DNA; STD; PRO; 1193 BP.
XX
AC   AF214487;
XX
DT   19-JAN-2000 (Rel. 62, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Mycobacterium avium alanine racemase (alr) gene, complete cds.
XX
KW   .
XX
OS   Mycobacterium avium
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC   Mycobacterium avium complex (MAC).
XX
RN   [1]
RP   1-1193
RX   DOI; 10.1111/j.1574-6968.2001.tb10547.x
RX   PUBMED; 11267762.
RA   Strych U., Penland R.L., Jimenez M., Krause K.L., Benedik M.J.;
RT   "Characterization of the alanine racemases from two mycobacteria";
RL   FEMS Microbiol. Lett. 196(2):93-98(2001).
XX
RN   [2]
RP   1-1193
RA   Strych U., Benedik M.J.;
RT   ;
RL   Submitted (09-DEC-1999) to the EMBL/GenBank/DDBJ databases.
RL   Biology and Biochemistry, University of Houston, 3201 Cullen Boulevard,
RL   Houston, TX 77204-5513, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1193
FT                   /organism="Mycobacterium avium"
FT                   /strain="2151"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1764"
FT   CDS             1..1176
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="alr"
FT                   /product="alanine racemase"
FT                   /EC_number="5.1.1.1"
FT                   /db_xref="GOA:Q9L888"
FT                   /db_xref="InterPro:IPR000821"
FT                   /db_xref="InterPro:IPR001608"
FT                   /db_xref="InterPro:IPR009006"
FT                   /db_xref="InterPro:IPR011079"
FT                   /db_xref="InterPro:IPR020622"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9L888"
FT                   /protein_id="AAF25943.1"
FT                   /translation="MAAVAVTPISLTPGVLAEALVDLGAIEHNVRLLCEQARGAQVMAV
FT                   VKADGYGHGAVQTARAALAAGAAELGVATVDEALALRAAGISAPVLAWLHPPGIDFRPA
FT                   LLAGVQIGLSSQRQLDELLTAVRDTGRTATVTVKVDTGLNRNGVPPAQYPSMLTALRRA
FT                   VAEQAIVPRGLMSHMVYADQPANPVNDVQAQRFTDMLAQAREQGVRFEVAHLSNSSATM
FT                   SRPDLAFDMVRPGIAVYGLSPVPELGDMGLVPAMTVKCTVALVKSIRAGESVSYGHTWT
FT                   AQRDTNLALLPVGYADGIFRSLGGRLQVSINGRRRPGVGRICMDQFVVDLGPGRPDVAE
FT                   GDEAILFGPGSNGEPTAQDWADLLGTIHYEVVTSPRGRITRTYREAHTVES"
XX
SQ   Sequence 1193 BP; 168 A; 427 C; 432 G; 166 T; 0 other;
     atggccgccg tggccgttac gccgatatcc ctgaccccgg gcgtcctcgc cgaggcgctg        60
     gtcgacctgg gcgccatcga gcacaacgtg cggctgctgt gcgagcaggc ccgcggcgcg       120
     caggtgatgg ccgtggtcaa ggccgacggc tacggccacg gggccgtgca gacggcgcgt       180
     gccgcgctgg ccgccggggc cgccgagctg ggcgtggcca ccgtcgacga ggcgctggcg       240
     ctgcgcgccg cggggatcag cgcgccggtg ctggcctggc tgcatccgcc cggcatcgac       300
     ttccggcccg cgctgctggc cggcgtgcag atcggcctgt cctcgcagcg ccagctcgac       360
     gagctgctga ccgcggtgcg cgacaccggc cggaccgcca cggtcaccgt caaggtcgac       420
     accgggctga accgcaacgg cgtgccgccg gcgcagtacc cgtcgatgct gaccgcgctg       480
     cgccgcgccg tcgccgagca ggccatcgtg ccgcgcggcc tgatgtctca catggtgtac       540
     gccgaccaac ccgccaaccc ggtgaatgac gttcaggcgc aacggttcac cgacatgctg       600
     gcccaggcgc gcgagcaggg ggtgcgcttc gaggtggccc acctgtcgaa ttcgtcggcc       660
     accatgtcgc gtcccgacct ggccttcgac atggtgcgcc ccggtatcgc ggtgtacggc       720
     ctcagccctg tccccgagct gggcgacatg ggcctggtgc ccgcgatgac ggtgaaatgt       780
     actgtggcac tggtgaagtc gatacgtgcg ggggaaagcg tgtcatacgg acacacctgg       840
     acggcgcagc gcgacaccaa cctggcgctg ctgccggtgg gctacgccga cggcatcttc       900
     cggtcgctgg gcgggcggct gcaggtgtcg atcaacggcc ggcggcggcc gggcgtcggc       960
     cggatctgca tggaccagtt cgtcgtcgac ctgggcccgg gccgccccga cgtggccgag      1020
     ggcgacgagg cgatcctgtt cgggccgggc agcaacggtg aacccaccgc ccaggattgg      1080
     gccgatctgc tcggcactat ccactacgaa gtggtgacca gcccccgcgg gcggatcacc      1140
     aggacctacc gcgaggcgca caccgttgag tcctgaccga acccgcaagc gcc             1193
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