EBI Dbfetch

ID   AF194963; SV 2; linear; genomic DNA; STD; PRO; 1786 BP.
XX
AC   AF194963;
XX
DT   23-FEB-2000 (Rel. 62, Created)
DT   24-FEB-2003 (Rel. 74, Last updated, Version 2)
XX
DE   Helicobacter pylori alpha-1,3/4-fucosyltransferase (fucTa) gene, complete
DE   cds.
XX
KW   .
XX
OS   Helicobacter pylori
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
XX
RN   [1]
RP   1-1786
RX   DOI; 10.1074/jbc.275.7.4988
RX   PUBMED; 10671538.
RA   Rasko D.A., Wang G., Palcic M.M., Taylor D.E.;
RT   "Cloning and characterization of the alpha(1,3/4) fucosyltransferase of
RT   Helicobacter pylori";
RL   J. Biol. Chem. 275(7):4988-4994(2000).
XX
RN   [2]
RP   1-1786
RA   Rasko D.A., Wang G., Palcic M.M., Taylor D.E.;
RT   ;
RL   Submitted (13-OCT-1999) to the EMBL/GenBank/DDBJ databases.
RL   Medical Microbiology and Immunology, University of Alberta, 1-28 Medical
RL   Sciences Building, Edmonton, Alberta T6G 2H7, Canada
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1786
RA   Rasko D.A., Wang G., Palcic M.M., Taylor D.E.;
RT   ;
RL   Submitted (20-FEB-2003) to the EMBL/GenBank/DDBJ databases.
RL   Medical Microbiology and Immunology, University of Alberta, 1-28 Medical
RL   Sciences Building, Edmonton, Alberta T6G 2H7, Canada
XX
CC   On Feb 20, 2003 this sequence version replaced gi:7021341.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1786
FT                   /organism="Helicobacter pylori"
FT                   /strain="UA948"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:210"
FT   CDS             105..1493
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="fucTa"
FT                   /product="alpha-1,3/4-fucosyltransferase"
FT                   /function="catalyzes alpha-1,3 and alpha-1,4-fucosylation"
FT                   /note="FucTa; Helicobacter pylori fucosyltransferase HP0379
FT                   and alpha-1,3-fucosyltransferase JHP1022 homolog"
FT                   /db_xref="GOA:Q9L8S4"
FT                   /db_xref="InterPro:IPR001503"
FT                   /db_xref="InterPro:IPR016646"
FT                   /db_xref="UniProtKB/TrEMBL:Q9L8S4"
FT                   /protein_id="AAF35291.2"
FT                   /translation="MFQPLLDAFIDSTHLDETTHKPPLNVALANWWPLKNSEKKGFRDF
FT                   ILHFILKQRYKIILHSNPNEPSDLVFGNPLEQARKILSYQNTKRVFYTGENEVPNFNLF
FT                   DYAIGFDELDFNDRYLRMPLYYAYLHYKAMLVNDTTSPYKLKALYTLKKPSHKFKENHP
FT                   NLCALIHNESDPWKRGFASFVASNPNAPIRNAFYDALNAIEPVASGGSVKNTLGYKVKN
FT                   KNEFLSQYKFNLCFENSQGYGYVTEKILDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHD
FT                   FNNFDEAIDYIRYLHAHQNAYLDMLYENPLNTIDGKAGFYQDLSFEKILDFFKNILEND
FT                   TIYHCNDAHYSALHRDLNEPLVSVDDLRRDHDDLRVNYDDLRVNYDDLRVNYDDLRVNY
FT                   DDLRVNYDDLRRDHDDLRRDHERLLSKATPLLELSQNTSFKIYRKAYQKSLPLLRAIRR
FT                   WVRK"
XX
SQ   Sequence 1786 BP; 563 A; 368 C; 311 G; 544 T; 0 other;
     atcccacttt cttatacttt ttaatagcga taccttttgc tctcgtgatc ttggcgtatt        60
     tcaaacgcca tttgagtttg cctaaattgg tttaaaggat aaaaatgttc cagcccttac       120
     tagacgcttt catagacagc acccatttag atgaaacaac ccataagccc ccattaaatg       180
     tagccctagc caattggtgg cccttaaaaa atagcgaaaa aaaaggattc agagacttca       240
     ttttgcattt catcctaaaa caacgctata aaatcattct gcacagcaac cctaatgaac       300
     cctcagatct agtctttggc aatcctttgg aacaagccag aaaaatctta tcttatcaaa       360
     acactaaacg agtgttttac accggcgaaa atgaagtgcc taatttcaat ctctttgatt       420
     acgccatagg ctttgatgaa ttggatttta acgatcgcta tttgagaatg cctttgtatt       480
     acgcctattt gcattataaa gccatgcttg ttaatgacac cacttcgccc tataaactca       540
     aagcccttta tactttaaaa aaaccttccc ataaatttaa agaaaaccac cccaatttat       600
     gtgcgctaat ccataacgag agcgatcctt ggaaaagagg gtttgccagt tttgtcgcaa       660
     gcaatcctaa cgctcccatc agaaacgctt tctatgacgc tttaaatgct attgagccag       720
     tggctagtgg agggagtgtg aaaaacactc taggctataa ggtcaaaaac aaaaacgaat       780
     ttttaagcca atacaagttc aacctctgtt ttgaaaactc acaaggctat ggctatgtaa       840
     ccgaaaaaat ccttgatgcg tatttcagcc acactatccc tatttattgg gggagtccca       900
     gcgtggcgaa agattttaac cctaaaagtt ttgtgaatgt gcatgatttc aacaactttg       960
     atgaagcgat tgattatatc agatatttac acgcgcacca aaacgcttat ttagacatgc      1020
     tttatgaaaa ccccttaaac accattgatg ggaaagcggg tttttaccaa gatttgagtt      1080
     ttgaaaagat cttagatttt ttcaaaaaca ttcttgaaaa cgatacgatt tatcattgca      1140
     atgatgccca ttattctgct cttcatcgtg atttgaatga gccgttagtg tctgttgatg      1200
     atttgagaag agatcatgat gatttgaggg ttaattatga tgatttgaga gttaattatg      1260
     atgatttgag agttaattat gatgatttga gagttaatta tgatgatttg agagttaatt      1320
     atgatgattt gagaagagat catgatgatt tgagaagaga tcatgaacgc ctcttatcaa      1380
     aggctacccc tttattggag ctatcccaaa acacctcttt taaaatctat cgcaaagctt      1440
     atcaaaagtc cttacccttg ttgcgtgcca taaggaggtg ggttagaaaa taggtttgta      1500
     aaaccaatca aaccccttgc gctatcatcg cagacgctac tttcctaaaa ccagcgatat      1560
     tagcccctaa aacaaaatta gtagggtctt taaactcttt acggtttgag aaacattctt      1620
     gtaaatctct ttcataatgt ggtgtaattt cgcatccacc acttcaaaac tccaagggtg      1680
     catgctcgca ttttgcgcca tttccaagcg ctcacgctta cccccccagc attagccgcc      1740
     ttgcctatgc cataagaaat cttagcctgt aaaaacaatt caatcg                     1786
//